Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p12820 Brassica napus
A08p36670 Brassica napus
A09p67710 Brassica napus
Aa31LG1G19870 Aethionema arabicum
Aa31LG5G4440 Aethionema arabicum
Actinidia11416 Actinidia chinensis
Actinidia11417 Actinidia chinensis
Actinidia27226 Actinidia chinensis
Actinidia27227 Actinidia chinensis
Actinidia39237 Actinidia chinensis
Actinidia39238 Actinidia chinensis
AL1G14580 Arabidopsis lyrata
AL4G28230 Arabidopsis lyrata
Aqoxy2G03850 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1SB5R1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2BAE9R Arachis hypogaea
AT1G04860 Arabidopsis thaliana
AT2G32780 Arabidopsis thaliana
ATR0609G080 Amborella trichopoda
Atru.chr4.1690 Acer truncatum
Atru.chr4.1691 Acer truncatum
AUR62018591 Chenopodium quinoa
AUR62020827 Chenopodium quinoa
BcaB01g00970 Brassica carinata
BcaB03g13468 Brassica carinata
BcaC07g36874 Brassica carinata
BcaC07g42157 Brassica carinata
BcaC07g42158 Brassica carinata
BolC4t23225H Brassica oleracea
BolC8t46959H Brassica oleracea
BolC8t52736H Brassica oleracea
BraA05t20221Z Brassica rapa
BraA08t35570Z Brassica rapa
BraA09t42101Z Brassica rapa
C04p16750 Brassica napus
C08p01540 Brassica napus
C08p52040 Brassica napus
CAN.G1635.11 Capsicum annuum
CAN.G765.21 Capsicum annuum
CARHR004250 Cardamine hirsuta
CARHR126680 Cardamine hirsuta
Carub.0001s0410 Capsella rubella
Carub.0004s1415 Capsella rubella
Ca_16382_v3 Cicer arietinum L.
CBR_g38465 Chara braunii
Cc03_g07890 Coffea canephora
CDE06G1403 Ceratophyllum demersum
Ciclev10004226m.g Citrus clementina
CiPaw.01G120700 Carya illinoinensis
ClCG05G003290 Citrullus lanatus
COL.COLO4_20146 Corchorus olitorius
Cpa.g.c36900.1 Carica papaya
Cpa.g.c36900.2 Carica papaya
Cre12.g533250 Chlamydomonas reinhardtii
Cre17.g712200 Chlamydomonas reinhardtii
CsaV3_3G010910 Cucumis sativus L.
CSS0014108 Camellia sinensis var. sinensis
CSS0019149 Camellia sinensis var. sinensis
DCAR_026615 Daucus carota
Dinv27232 Davidia involucrata
Duzib212G0883 Durio zibethinus
ECA233G4597 Erigeron canadensis
ECA248G0878 Erigeron canadensis
EL10Ac1g01993 Beta vulgaris
EL10Ac2g03910 Beta vulgaris
Eucgr.H02776 Eucalyptus grandis
FAN07G1879 Fragaria x ananassa
FAN12G1567 Fragaria x ananassa
FAN17G2369 Fragaria x ananassa
FAN22G2235 Fragaria x ananassa
FvH4_4g16490 Fragaria vesca
Glyma.11G256600 Glycine max
Glyma.18G000500 Glycine max
Gohir.A03G094600 Gossypium hirsutum
Gohir.D02G124000 Gossypium hirsutum
Gorai.005G130100 Gossypium raimondii
GSVIVG01021053001 Vitis vinifera
HanXRQChr01g0022461 Helianthus annuus
Haze_11613 Corylus avellana
Hma1.2p1_0187F.1_g082300 Hydrangea macrophylla
Hma1.2p1_0383F.1_g140280 Hydrangea macrophylla
Hma1.2p1_1407F.1_g281410 Hydrangea macrophylla
HPP92_013626 Vanilla planifolia
Hund18994 Selenicereus undatus
Lalb_Chr08g0230331 Lupinus albus
Lj6C552G3 Lonicera japonica
Lj6g0024996 Lotus japonicus
Lsat_1_v5_gn_1_72160 Lactuca sativa
Lsat_1_v5_gn_6_60801 Lactuca sativa
Manes.03G147300 Manihot esculenta
Manes.15G054100 Manihot esculenta
Mapoly0123s0038 Marchantia polymorpha
MD04G1009400 Malus domestica
MD13G1284700 Malus domestica
Medtr3g083600 Medicago truncatula
MELO3C006310.2 Cucumis melo
Migut.C00390 Erythranthe guttata
Migut.G00711 Erythranthe guttata
Migut.N00208 Erythranthe guttata
MSTRG.4227 Avicennia marina
Nitab4.5_0002260g0180 Nicotiana tabacum
Nitab4.5_0003502g0040 Nicotiana tabacum
Nitab4.5_0006297g0020 Nicotiana tabacum
Nitab4.5_0007416g0010 Nicotiana tabacum
Nn1g07894 Nelumbo nucifera
Nn3g20024 Nelumbo nucifera
Oeu049032.1 Olea europaea
Oeu055784.1 Olea europaea
Os08g0527100 Oryza sativa ssp. japonica
Os08g0527300 Oryza sativa ssp. japonica
Os08g0527400 Oryza sativa ssp. japonica
Os08g0527600 Oryza sativa ssp. japonica
Os08g0527800 Oryza sativa ssp. japonica
Os08g0527900 Oryza sativa ssp. japonica
Os08g0528000 Oryza sativa ssp. japonica
Os08g0528100 Oryza sativa ssp. japonica
Os09g0505100 Oryza sativa ssp. japonica
Peaxi162Scf00047g00430 Petunia axillaris
Peaxi162Scf00423g00315 Petunia axillaris
PGR083G0566 Punica granatum
PGSC0003DMG400031289 Solanum tuberosum
PGSC0003DMG401015759 Solanum tuberosum
Phvul.001G268800 Phaseolus vulgaris
Potri.001G315600 Populus trichocarpa
Potri.017G055600 Populus trichocarpa
Pp3c18_14990 Physcomitrium patens
Pp3c19_20640 Physcomitrium patens
Pp3c22_11200 Physcomitrium patens
Pp3c9_16631 Physcomitrium patens
Prupe.1G008700 Prunus persica
Psat5g101840 Pisum sativum
PSO541G1554 Papaver somniferum
PSO675G6815 Papaver somniferum
PSO832G1018 Papaver somniferum
PSO832G1431 Papaver somniferum
PSO832G1963 Papaver somniferum
PSO832G3564 Papaver somniferum
PSO832G3940 Papaver somniferum
QL06p025007 Quercus lobata
RcHm_v2.0_Chr4g0415171 Rosa chinensis
Rhsim02G0058800 Rhododendron simsii
Sabra16G0199600 Salix brachista
Sabra17G0047100 Salix brachista
Sabra17G0049300 Salix brachista
SalBow3G1138 Salvia bowleyana
Sc19g0007170 Simmondsia chinensis
Sed0005652 Sechium edule
Sed0023360 Sechium edule
SEGI_05196 Sequoiadendron giganteum
SEGI_06521 Sequoiadendron giganteum
SEGI_11917 Sequoiadendron giganteum
SEGI_16543 Sequoiadendron giganteum
SEGI_19895 Sequoiadendron giganteum
SEGI_35602 Sequoiadendron giganteum
SGA_v2.0_scaffold626G53246 Striga asiatica
Solyc05g053690.2 Solanum lycopersicum
Solyc09g091930.3 Solanum lycopersicum
Sopen05g032180 Solanum pennellii
Sopen09g034830 Solanum pennellii
Sp1g03710 Schrenkiella parvula
Sp4g15130 Schrenkiella parvula
TAR362G0116 Trochodendron aralioides
TAR362G1186 Trochodendron aralioides
TAR365G1117 Trochodendron aralioides
TAR633G1099 Trochodendron aralioides
TAR636G0234 Trochodendron aralioides
THA.LOC104801027 Tarenaya hassleriana
THA.LOC104826119 Tarenaya hassleriana
Thecc.04G203100 Theobroma cacao
Thhalv10006716m.g Eutrema salsugineum
TPR.G19333 Trifolium pratense
TWI09G0574 Tripterygium wilfordii
TWI09G1517 Tripterygium wilfordii
TWI73G0783 Tripterygium wilfordii
unitig_747.g21697 Utricularia gibba
vmacro15538 Vaccinium macrocarpon
Zm00001eb102350 Zea mays
Zm00001eb175050 Zea mays

User provided reference genes

Program Settings