Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p36130 Brassica napus
A10p07550 Brassica napus
Aa31LG11G8660 Aethionema arabicum
Aa31LG6G9390 Aethionema arabicum
Aa31sc107G60 Aethionema arabicum
Aa31sc107G70 Aethionema arabicum
Aa31sc95G130 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3949 Anthoceros agrestis
Actinidia03462 Actinidia chinensis
Actinidia03463 Actinidia chinensis
Actinidia29473 Actinidia chinensis
Ah.15g093760 Amaranthus hybridus
AL1G52270 Arabidopsis lyrata
AL2G28910 Arabidopsis lyrata
Aqoxy3G03785 Aquilegia oxysepala
Aqoxy6G02874 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.875P1G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FDSF2K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I497ZX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KLV74S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LHV34C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LMC2LS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MAXD3F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YMC104 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YZW1CW Arachis hypogaea
AT1G44318 Arabidopsis thaliana
AT1G69740 Arabidopsis thaliana
ATR0691G248 Amborella trichopoda
Atru.chr12.1381 Acer truncatum
Atru.chr13.1495 Acer truncatum
AUR62014326 Chenopodium quinoa
AUR62019066 Chenopodium quinoa
BcaB03g14749 Brassica carinata
BcaB04g19319 Brassica carinata
BcaB05g22163 Brassica carinata
BcaB06g27098 Brassica carinata
BcaB07g33952 Brassica carinata
BcaC08g42844 Brassica carinata
BcaC08g46419 Brassica carinata
BolC6t35193H Brassica oleracea
BolC6t39425H Brassica oleracea
BraA07t31189Z Brassica rapa
BraSC36t46049Z Brassica rapa
C06p00600 Brassica napus
C06p43500 Brassica napus
CAN.G908.4 Capsicum annuum
CANSAT25G1111 Cannabis sativa
CARHR035900 Cardamine hirsuta
CARHR062800 Cardamine hirsuta
Carub.0001s3515 Capsella rubella
Carub.0002s1641 Capsella rubella
Ca_16573_v3 Cicer arietinum L.
Ca_29570_v3 Cicer arietinum L.
CBR_g49534 Chara braunii
Cc08_g06800 Coffea canephora
CDE10G0179 Ceratophyllum demersum
CDE10G1335 Ceratophyllum demersum
Cfa018581 Carpinus fangiana
Cfa022049 Carpinus fangiana
Ciclev10001195m.g Citrus clementina
CiPaw.16G066200 Carya illinoinensis
ClCG11G008960 Citrullus lanatus
COL.COLO4_24698 Corchorus olitorius
Cpa.g.sc64.96 Carica papaya
Cre02.g091050 Chlamydomonas reinhardtii
CsaV3_2G033150 Cucumis sativus L.
CSS0022256 Camellia sinensis var. sinensis
CSS0027293 Camellia sinensis var. sinensis
DCAR_016682 Daucus carota
Dinv07208 Davidia involucrata
Dinv27301 Davidia involucrata
Duzib041G0414 Durio zibethinus
Duzib116G0657 Durio zibethinus
ECA233G1142 Erigeron canadensis
EL10Ac1g01030 Beta vulgaris
Eucgr.F03796 Eucalyptus grandis
FAN15G2864 Fragaria x ananassa
FAN20G2211 Fragaria x ananassa
FAN24G0257 Fragaria x ananassa
FAN27G3176 Fragaria x ananassa
FvH4_2g27170 Fragaria vesca
Glyma.04G247700 Glycine max
Glyma.06G115000 Glycine max
Gohir.A05G235500 Gossypium hirsutum
Gohir.D05G237801 Gossypium hirsutum
Gorai.009G246200 Gossypium raimondii
GSVIVG01008851001 Vitis vinifera
HanXRQChr17g0559761 Helianthus annuus
Haze_17499 Corylus avellana
Haze_27000 Corylus avellana
Haze_27031 Corylus avellana
Hma1.2p1_0129F.1_g060300 Hydrangea macrophylla
HPP92_019462 Vanilla planifolia
Lalb_Chr08g0241321 Lupinus albus
Lalb_Chr11g0066041 Lupinus albus
Lj1g0017187 Lotus japonicus
Lj7A342T56 Lonicera japonica
Lsat_1_v5_gn_8_139480 Lactuca sativa
Lsat_1_v5_gn_8_141520 Lactuca sativa
Lsat_1_v5_gn_8_143861 Lactuca sativa
Manes.02G164600 Manihot esculenta
Manes.18G078475 Manihot esculenta
Mapoly0065s0095 Marchantia polymorpha
MBI14_g21210_MAGBIO Magnolia biondii
MBI14_g37526_MAGBIO Magnolia biondii
MCO01G126 Micromonas commoda
MD08G1161600 Malus domestica
MD15G1346700 Malus domestica
Medtr3g088610 Medicago truncatula
MELO3C008086.2 Cucumis melo
Migut.C01121 Erythranthe guttata
MSTRG.25378 Avicennia marina
Nitab4.5_0000502g0120 Nicotiana tabacum
Nitab4.5_0005516g0010 Nicotiana tabacum
Nn3g17591 Nelumbo nucifera
Nn3g17592 Nelumbo nucifera
Nn4g23592 Nelumbo nucifera
Nn4g23594 Nelumbo nucifera
Oeu028562.1 Olea europaea
Oeu059440.1 Olea europaea
Oeu059446.1 Olea europaea
Os06g0704600 Oryza sativa ssp. japonica
Peaxi162Scf00288g00822 Petunia axillaris
PGR044G2730 Punica granatum
PGSC0003DMG400029545 Solanum tuberosum
Phvul.009G127100 Phaseolus vulgaris
Potri.002G082300 Populus trichocarpa
Pp3c12_10600 Physcomitrium patens
Pp3c4_13690 Physcomitrium patens
PRCOL_00003407 Prasinoderma coloniale
Prupe.1G494300 Prunus persica
Psat0s476g0040 Pisum sativum
Psat1g013080 Pisum sativum
Psat1g078960 Pisum sativum
Psat1g079000 Pisum sativum
Psat4g053240 Pisum sativum
Psat4g053280 Pisum sativum
Psat5g087720 Pisum sativum
Psat5g087760 Pisum sativum
PSO063G2338 Papaver somniferum
PSO339G3693 Papaver somniferum
PSO384G4520 Papaver somniferum
PSO782G2793 Papaver somniferum
QL09p034136 Quercus lobata
RcHm_v2.0_Chr6g0296081 Rosa chinensis
Rhsim05G0148200 Rhododendron simsii
Sabra02G0064500 Salix brachista
Sabra05G0135000 Salix brachista
SalBow7G1186 Salvia bowleyana
Sc16g0000040 Simmondsia chinensis
Sed0003239 Sechium edule
SEGI_23261 Sequoiadendron giganteum
SEGI_40510 Sequoiadendron giganteum
SGA_v2.0_scaffold24G10456 Striga asiatica
SGA_v2.0_scaffold52G18960 Striga asiatica
SHI34070 Sapria himalayana
SMO147G0120 Selaginella moellendorffii
Solyc08g069030.4 Solanum lycopersicum
Sopen08g022680 Solanum pennellii
Sp1g33510 Schrenkiella parvula
Sp5g24850 Schrenkiella parvula
Sp6g37550 Schrenkiella parvula
SpUn0247_0040 Schrenkiella parvula
TAR371G0308 Trochodendron aralioides
TAR622G0657 Trochodendron aralioides
TAR629G0788 Trochodendron aralioides
THA.LOC104813147 Tarenaya hassleriana
Thecc.08G127500 Theobroma cacao
Thhalv10012213m.g Eutrema salsugineum
Thhalv10018595m.g Eutrema salsugineum
TPR.G16047 Trifolium pratense
TPR.G20499 Trifolium pratense
TPR.G35178 Trifolium pratense
TWI32G0928 Tripterygium wilfordii
TWI60G1334 Tripterygium wilfordii
unitig_46.g18101 Utricularia gibba
VMungo1309G0189 Vigna mungo
Zm00001eb227310 Zea mays

User provided reference genes

Program Settings