Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p36270 Brassica napus
A05p39920 Brassica napus
Aa31LG1G23090 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1024 Anthoceros agrestis
Actinidia05367 Actinidia chinensis
Actinidia11586 Actinidia chinensis
Actinidia20733 Actinidia chinensis
Actinidia27153 Actinidia chinensis
Actinidia29101 Actinidia chinensis
Actinidia29102 Actinidia chinensis
Ah.02g115900 Amaranthus hybridus
Ah.12g058610 Amaranthus hybridus
AL3G19930 Arabidopsis lyrata
AL6G10610 Arabidopsis lyrata
Aqoxy2G00900 Aquilegia oxysepala
Aqoxy4G02574 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.NAY5W3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S2G015 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W1QHU6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZN813U Arachis hypogaea
AT3G08930 Arabidopsis thaliana
AT5G01460 Arabidopsis thaliana
ATR0618G011 Amborella trichopoda
ATR0759G042 Amborella trichopoda
ATR0759G047 Amborella trichopoda
Atru.chr8.2242 Acer truncatum
AUR62010458 Chenopodium quinoa
AUR62030453 Chenopodium quinoa
BcaB04g18559 Brassica carinata
BcaC01g04205 Brassica carinata
BcaC05g29627 Brassica carinata
BolC3t16659H Brassica oleracea
BolC5t34549H Brassica oleracea
BraA03t12798Z Brassica rapa
BraSC256t45932Z Brassica rapa
C03p43910 Brassica napus
C05p58960 Brassica napus
CAN.G5.12 Capsicum annuum
CANSAT35G0110 Cannabis sativa
CARHR083260 Cardamine hirsuta
CARHR211830 Cardamine hirsuta
Carub.0003s0804 Capsella rubella
Carub.0006s0037 Capsella rubella
Ca_07641_v3 Cicer arietinum L.
Ca_20230_v3 Cicer arietinum L.
Ca_20232_v3 Cicer arietinum L.
Ca_30080_v3 Cicer arietinum L.
CBR_g40208 Chara braunii
CBR_g53729 Chara braunii
Cc06_g01360 Coffea canephora
CDE05G1648 Ceratophyllum demersum
CDE05G1838 Ceratophyllum demersum
Cfa017208 Carpinus fangiana
Ciclev10011517m.g Citrus clementina
CiPaw.09G209200 Carya illinoinensis
CiPaw.10G156600 Carya illinoinensis
ClCG04G006990 Citrullus lanatus
COL.COLO4_14536 Corchorus olitorius
Cpa.g.sc11.141 Carica papaya
Cre01.g023400 Chlamydomonas reinhardtii
CsaV3_4G026280 Cucumis sativus L.
CSS0038026 Camellia sinensis var. sinensis
CSS0040367 Camellia sinensis var. sinensis
CSS0040994 Camellia sinensis var. sinensis
DCAR_015417 Daucus carota
DCAR_018702 Daucus carota
Dinv23105 Davidia involucrata
Duzib093G1828 Durio zibethinus
Duzib106G0096 Durio zibethinus
Duzib128G0387 Durio zibethinus
ECA247G1720 Erigeron canadensis
EL10Ac5g12561 Beta vulgaris
Eucgr.B02811 Eucalyptus grandis
FAN02G2014 Fragaria x ananassa
FAN05G4390 Fragaria x ananassa
FAN09G4250 Fragaria x ananassa
FAN14G1433 Fragaria x ananassa
FAN14G5854 Fragaria x ananassa
FvH4_6g11450 Fragaria vesca
Glyma.01G122100 Glycine max
Glyma.03G058100 Glycine max
Glyma.07G149900 Glycine max
Glyma.16G099300 Glycine max
Glyma.18G200800 Glycine max
Gohir.A09G165200 Gossypium hirsutum
Gohir.D09G160800 Gossypium hirsutum
Gorai.006G182500 Gossypium raimondii
GSVIVG01033959001 Vitis vinifera
HanXRQChr10g0299881 Helianthus annuus
Haze_21003 Corylus avellana
Hma1.2p1_0362F.1_g136250 Hydrangea macrophylla
HPP92_003698 Vanilla planifolia
Hund14296 Selenicereus undatus
Lalb_Chr01g0023081 Lupinus albus
Lalb_Chr03g0043281 Lupinus albus
Lalb_Chr19g0124541 Lupinus albus
Lj2A75G35 Lonicera japonica
Lj3A953T53 Lonicera japonica
Lj3g0019592 Lotus japonicus
Lj3g0026649 Lotus japonicus
Lsat_1_v5_gn_9_34621 Lactuca sativa
Manes.09G104800 Manihot esculenta
Manes.09G105700 Manihot esculenta
Mapoly0058s0053 Marchantia polymorpha
MCO03G500 Micromonas commoda
MD04G1152700 Malus domestica
MD12G1166000 Malus domestica
Medtr7g068440 Medicago truncatula
MELO3C003291.2 Cucumis melo
Migut.J00170 Erythranthe guttata
Migut.L02013 Erythranthe guttata
MSTRG.10218 Avicennia marina
MSTRG.26811 Avicennia marina
Nitab4.5_0000335g0010 Nicotiana tabacum
Nitab4.5_0000511g0010 Nicotiana tabacum
Nn2g11497 Nelumbo nucifera
Oeu041306.1 Olea europaea
Oeu064499.2 Olea europaea
Peaxi162Scf00141g01026 Petunia axillaris
PGR004G0735 Punica granatum
PGSC0003DMG400023084 Solanum tuberosum
Phvul.008G104400 Phaseolus vulgaris
Phvul.010G001200 Phaseolus vulgaris
Potri.006G100200 Populus trichocarpa
Potri.016G116200 Populus trichocarpa
Pp3c13_15020 Physcomitrium patens
Pp3c23_4110 Physcomitrium patens
PRCOL_00002088 Prasinoderma coloniale
Prupe.6G277300 Prunus persica
Psat3g128200 Pisum sativum
PSO339G6136 Papaver somniferum
PSO541G6111 Papaver somniferum
PSO801G0155 Papaver somniferum
QL07p019755 Quercus lobata
RcHm_v2.0_Chr3g0463141 Rosa chinensis
Rhsim03G0144200 Rhododendron simsii
Sabra06G0077000 Salix brachista
Sabra16G0111700 Salix brachista
SalBow5G2920 Salvia bowleyana
Sc01g0006450 Simmondsia chinensis
Sed0026155 Sechium edule
Sed0027660 Sechium edule
SEGI_00285 Sequoiadendron giganteum
SEGI_07345 Sequoiadendron giganteum
SGA_v2.0_scaffold110G31215 Striga asiatica
SGA_v2.0_scaffold240G44095 Striga asiatica
SMO015G0001 Selaginella moellendorffii
SMO023G0001 Selaginella moellendorffii
SMO146G0061 Selaginella moellendorffii
SMO146G0194 Selaginella moellendorffii
SMO146G0334 Selaginella moellendorffii
SMO173G0002 Selaginella moellendorffii
SMO173G0021 Selaginella moellendorffii
SMO173G0027 Selaginella moellendorffii
SMO173G0093 Selaginella moellendorffii
SMO367G0485 Selaginella moellendorffii
Solyc09g005310.3 Solanum lycopersicum
Sopen09g001280 Solanum pennellii
Sp3g07320 Schrenkiella parvula
Sp6g40750 Schrenkiella parvula
TAR633G0126 Trochodendron aralioides
TAR636G2600 Trochodendron aralioides
THA.LOC104823300 Tarenaya hassleriana
Thecc.05G016000 Theobroma cacao
Thhalv10013023m.g Eutrema salsugineum
Thhalv10020541m.g Eutrema salsugineum
TPR.G13353 Trifolium pratense
TPR.G7076 Trifolium pratense
TPR.G8133 Trifolium pratense
TWI53G0466 Tripterygium wilfordii
TWI74G1106 Tripterygium wilfordii
unitig_22.g6592 Utricularia gibba
unitig_8.g3229 Utricularia gibba
vmacro11169 Vaccinium macrocarpon
VMungo0331G1185 Vigna mungo
VMungo1080G1595 Vigna mungo
Zm00001eb269470 Zea mays
Zm00001eb378570 Zea mays

User provided reference genes

Program Settings