Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p55210 Brassica napus
A03p55230 Brassica napus
Actinidia01556 Actinidia chinensis
Actinidia15434 Actinidia chinensis
Actinidia15435 Actinidia chinensis
Actinidia16997 Actinidia chinensis
Ah.11g039850 Amaranthus hybridus
AL7G29080 Arabidopsis lyrata
Aqoxy5G01812 Aquilegia oxysepala
AT4G24200 Arabidopsis thaliana
ATR0579G136 Amborella trichopoda
ATR1134G065 Amborella trichopoda
Atru.chr13.267 Acer truncatum
AUR62035030 Chenopodium quinoa
AUR62040550 Chenopodium quinoa
BcaC06g32891 Brassica carinata
BcaC06g32906 Brassica carinata
BolC7t45837H Brassica oleracea
BolC7t45844H Brassica oleracea
BraA03t14580Z Brassica rapa
BraA03t14582Z Brassica rapa
C07p53430 Brassica napus
C07p53520 Brassica napus
CAN.G1925.3 Capsicum annuum
CANSAT25G2239 Cannabis sativa
CARHR231610 Cardamine hirsuta
Carub.0007s1689 Capsella rubella
Ca_13435_v3 Cicer arietinum L.
Cc10_g01500 Coffea canephora
CDE02G0563 Ceratophyllum demersum
CDE04G0614 Ceratophyllum demersum
Cfa012940 Carpinus fangiana
Cfa013971 Carpinus fangiana
Ciclev10000122m.g Citrus clementina
CiPaw.07G148100 Carya illinoinensis
CiPaw.08G067200 Carya illinoinensis
ClCG05G018200 Citrullus lanatus
COL.COLO4_26128 Corchorus olitorius
Cpa.g.sc26.312 Carica papaya
CsaV3_3G045950 Cucumis sativus L.
CSS0039596 Camellia sinensis var. sinensis
DCAR_013878 Daucus carota
DCAR_013879 Daucus carota
DCAR_016728 Daucus carota
Dinv31863 Davidia involucrata
Dinv39528 Davidia involucrata
Dinv39531 Davidia involucrata
Duzib041G0770 Durio zibethinus
Duzib093G0852 Durio zibethinus
Duzib116G0388 Durio zibethinus
Duzib177G1174 Durio zibethinus
ECA232G5024 Erigeron canadensis
ECA233G4486 Erigeron canadensis
ECA238G1952 Erigeron canadensis
EL10Ac1g02168 Beta vulgaris
Eucgr.H00969 Eucalyptus grandis
FAN04G1043 Fragaria x ananassa
FAN08G2565 Fragaria x ananassa
FAN18G0158 Fragaria x ananassa
FAN20G1912 Fragaria x ananassa
FvH4_2g38250 Fragaria vesca
FvH4_5g32010 Fragaria vesca
Glyma.04G023600 Glycine max
Glyma.06G023600 Glycine max
Glyma.14G219900 Glycine max
Glyma.17G258900 Glycine max
Gohir.A05G185700 Gossypium hirsutum
Gohir.A06G002700 Gossypium hirsutum
Gohir.D05G188500 Gossypium hirsutum
Gohir.D06G005700 Gossypium hirsutum
Gorai.009G193800 Gossypium raimondii
Gorai.010G002900 Gossypium raimondii
GSVIVG01009936001 Vitis vinifera
GSVIVG01024041001 Vitis vinifera
GSVIVG01034470001 Vitis vinifera
HanXRQChr06g0184651 Helianthus annuus
HanXRQChr13g0387191 Helianthus annuus
HanXRQChr14g0431231 Helianthus annuus
Haze_00732 Corylus avellana
Haze_21293 Corylus avellana
Haze_22650 Corylus avellana
Hma1.2p1_0023F.1_g015570 Hydrangea macrophylla
Lalb_Chr08g0246181 Lupinus albus
Lalb_Chr11g0061811 Lupinus albus
Lalb_Chr23g0266101 Lupinus albus
Lj4C22T7 Lonicera japonica
Lj4C798T8 Lonicera japonica
Lj5g0002583 Lotus japonicus
Lj5g0020561 Lotus japonicus
Lsat_1_v5_gn_0_1320 Lactuca sativa
Manes.02G197000 Manihot esculenta
Manes.05G145700 Manihot esculenta
Manes.18G012100 Manihot esculenta
MBI05_g23390_MAGBIO Magnolia biondii
MBI09_g14157_MAGBIO Magnolia biondii
MBI10_g30418_MAGBIO Magnolia biondii
MBI10_g30419_MAGBIO Magnolia biondii
MD08G1010900 Malus domestica
MD15G1010900 Malus domestica
Medtr1g025500 Medicago truncatula
MELO3C003744.2 Cucumis melo
Migut.C00854 Erythranthe guttata
Migut.N03170 Erythranthe guttata
MSTRG.22343 Avicennia marina
MSTRG.24238 Avicennia marina
MSTRG.25260 Avicennia marina
Nitab4.5_0000337g0040 Nicotiana tabacum
Nitab4.5_0003251g0050 Nicotiana tabacum
Nitab4.5_0005970g0010 Nicotiana tabacum
Nn3g18652 Nelumbo nucifera
Nn5g30748 Nelumbo nucifera
Nn6g32019 Nelumbo nucifera
Nn7g36677 Nelumbo nucifera
Oeu001044.1 Olea europaea
Oeu014169.1 Olea europaea
Oeu046285.1 Olea europaea
Oeu054487.1 Olea europaea
Oeu061973.1 Olea europaea
Os06g0631300 Oryza sativa ssp. japonica
Peaxi162Scf00553g00071 Petunia axillaris
PGR042G1841 Punica granatum
PGR083G2535 Punica granatum
PGSC0003DMG400029336 Solanum tuberosum
Phvul.001G005400 Phaseolus vulgaris
Phvul.009G009400 Phaseolus vulgaris
Potri.002G020000 Populus trichocarpa
Potri.005G241400 Populus trichocarpa
Prupe.1G363500 Prunus persica
Prupe.1G553900 Prunus persica
Psat6g002200 Pisum sativum
PSO170G1273 Papaver somniferum
PSO541G2778 Papaver somniferum
PSO675G3234 Papaver somniferum
PSO700G0319 Papaver somniferum
QL02p011991 Quercus lobata
QL02p026094 Quercus lobata
QL11p008494 Quercus lobata
QL12p004280 Quercus lobata
RcHm_v2.0_Chr6g0303121 Rosa chinensis
RcHm_v2.0_Chr7g0228011 Rosa chinensis
Rhsim06G0019800 Rhododendron simsii
RhsimUnG0065300 Rhododendron simsii
Sabra02G0016300 Salix brachista
Sabra05G0186900 Salix brachista
Sabra13G0112100 Salix brachista
Sabra13G0112200 Salix brachista
SalBow7G0836 Salvia bowleyana
Sc15g0004870 Simmondsia chinensis
Sed0006884 Sechium edule
Sed0012955 Sechium edule
SEGI_23721 Sequoiadendron giganteum
SGA_v2.0_scaffold390G50586 Striga asiatica
Solyc12g089320.3 Solanum lycopersicum
Sopen12g031180 Solanum pennellii
Sp7g22170 Schrenkiella parvula
TAR376G0902 Trochodendron aralioides
TAR381G0253 Trochodendron aralioides
TAR381G0315 Trochodendron aralioides
TAR381G1116 Trochodendron aralioides
TAR381G1218 Trochodendron aralioides
TAR624G0280 Trochodendron aralioides
TAR624G1117 Trochodendron aralioides
TAR625G1519 Trochodendron aralioides
TAR628G0881 Trochodendron aralioides
TAR628G1379 Trochodendron aralioides
THA.LOC104806874 Tarenaya hassleriana
THA.LOC104814731 Tarenaya hassleriana
Thecc.08G046500 Theobroma cacao
Thhalv10027094m.g Eutrema salsugineum
TPR.G26376 Trifolium pratense
TWI12G0098 Tripterygium wilfordii
TWI36G1438 Tripterygium wilfordii
TWI56G0857 Tripterygium wilfordii
unitig_22.g6796 Utricularia gibba
unitig_8.g3383 Utricularia gibba
VMungo0647G0001 Vigna mungo
VMungo1309G0723 Vigna mungo
Zm00001eb228940 Zea mays

User provided reference genes

Program Settings