Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p22420 Brassica napus
A04p30140 Brassica napus
A05p06420 Brassica napus
A09p48830 Brassica napus
Aa31LG5G19600 Aethionema arabicum
Actinidia29686 Actinidia chinensis
Ah.10g036480 Amaranthus hybridus
Ah.16g103300 Amaranthus hybridus
AL4G37600 Arabidopsis lyrata
AL5G37130 Arabidopsis lyrata
Aqoxy4G02628 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.66PPWS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I5QRDP Arachis hypogaea
AT2G40000 Arabidopsis thaliana
AT3G55840 Arabidopsis thaliana
ATR0618G085 Amborella trichopoda
ATR0693G017 Amborella trichopoda
Atru.chr12.4 Acer truncatum
AUR62012225 Chenopodium quinoa
AUR62022857 Chenopodium quinoa
BcaB01g00057 Brassica carinata
BcaB01g03584 Brassica carinata
BcaB02g09061 Brassica carinata
BcaB06g29121 Brassica carinata
BcaC01g05448 Brassica carinata
BcaC02g07343 Brassica carinata
BcaC02g07344 Brassica carinata
BcaC02g07345 Brassica carinata
BcaC02g07346 Brassica carinata
BcaC02g07389 Brassica carinata
BcaC09g52232 Brassica carinata
BcaNung05460 Brassica carinata
BcaNung05461 Brassica carinata
BolC3t15044H Brassica oleracea
BolC4t22365H Brassica oleracea
BolC4t22366H Brassica oleracea
BolC4t28276H Brassica oleracea
BolC7t41876H Brassica oleracea
BolC8t50737H Brassica oleracea
BraA03t11470Z Brassica rapa
BraA04t18495Z Brassica rapa
BraA05t19610Z Brassica rapa
BraA09t40336Z Brassica rapa
C03p26580 Brassica napus
C04p07450 Brassica napus
C04p07470 Brassica napus
C04p67730 Brassica napus
C05p20030 Brassica napus
C08p31160 Brassica napus
C08p31450 Brassica napus
CANSAT56G3936 Cannabis sativa
CARHR134950 Cardamine hirsuta
CARHR165950 Cardamine hirsuta
Carub.0004s2214 Capsella rubella
Carub.0005s2262 Capsella rubella
Ca_05946_v3 Cicer arietinum L.
Ca_17155_v3 Cicer arietinum L.
Cc02_g06790 Coffea canephora
CDE03G0196 Ceratophyllum demersum
CDE04G0060 Ceratophyllum demersum
CDE04G2684 Ceratophyllum demersum
CDE07G0538 Ceratophyllum demersum
Cfa001353 Carpinus fangiana
Ciclev10031447m.g Citrus clementina
CiPaw.01G296700 Carya illinoinensis
CiPaw.02G190900 Carya illinoinensis
ClCG11G006280 Citrullus lanatus
COL.COLO4_25636 Corchorus olitorius
Cpa.g.sc19.206 Carica papaya
CsaV3_6G001690 Cucumis sativus L.
DCAR_011797 Daucus carota
Dinv20976 Davidia involucrata
Dinv21029 Davidia involucrata
Dinv34412 Davidia involucrata
Duzib114G0607 Durio zibethinus
Duzib128G1594 Durio zibethinus
ECA238G2090 Erigeron canadensis
EL10Ac2g04804 Beta vulgaris
Eucgr.G03040 Eucalyptus grandis
Eucgr.J00236 Eucalyptus grandis
FAN01G2475 Fragaria x ananassa
FAN03G2393 Fragaria x ananassa
FAN06G4939 Fragaria x ananassa
FAN10G1202 Fragaria x ananassa
FvH4_7g24150 Fragaria vesca
Glyma.02G255400 Glycine max
Glyma.11G228100 Glycine max
Glyma.14G061200 Glycine max
Glyma.18G029300 Glycine max
Gohir.A05G303900 Gossypium hirsutum
Gohir.A10G233600 Gossypium hirsutum
Gohir.A13G016200 Gossypium hirsutum
Gohir.D05G302900 Gossypium hirsutum
Gohir.D10G245900 Gossypium hirsutum
Gohir.D13G017300 Gossypium hirsutum
Gorai.009G322100 Gossypium raimondii
Gorai.011G283600 Gossypium raimondii
Gorai.013G019200 Gossypium raimondii
GSVIVG01032858001 Vitis vinifera
HanXRQChr07g0202521 Helianthus annuus
Haze_17196 Corylus avellana
Hma1.2p1_1409F.1_g281590 Hydrangea macrophylla
HPP92_019430 Vanilla planifolia
Lalb_Chr10g0105071 Lupinus albus
Lalb_Chr15g0084211 Lupinus albus
Lalb_Chr18g0052671 Lupinus albus
Lj1P952T30 Lonicera japonica
Lj6g0001525 Lotus japonicus
Lj8C71T1 Lonicera japonica
LjContig00357g0017260 Lotus japonicus
Lsat_1_v5_gn_2_121400 Lactuca sativa
Manes.07G126900 Manihot esculenta
Manes.10G016200 Manihot esculenta
MBI02_g23015_MAGBIO Magnolia biondii
MBI05_g14236_MAGBIO Magnolia biondii
MBI09_g39159_MAGBIO Magnolia biondii
MBI14_g09425_MAGBIO Magnolia biondii
MBI15_g28805_MAGBIO Magnolia biondii
MD01G1148800 Malus domestica
MD07G1215700 Malus domestica
Medtr3g070230 Medicago truncatula
Medtr5g082150 Medicago truncatula
MELO3C008286.2 Cucumis melo
Migut.F00698 Erythranthe guttata
MSTRG.27342 Avicennia marina
MSTRG.8967 Avicennia marina
Nitab4.5_0000802g0150 Nicotiana tabacum
Nitab4.5_0001346g0020 Nicotiana tabacum
Nn1g09019 Nelumbo nucifera
Nn2g11424 Nelumbo nucifera
Nn5g26808 Nelumbo nucifera
Os01g0855600 Oryza sativa ssp. japonica
Peaxi162Scf01313g00013 Petunia axillaris
PGR044G2033 Punica granatum
PGR142G4408 Punica granatum
Phvul.001G241300 Phaseolus vulgaris
Phvul.008G225500 Phaseolus vulgaris
Potri.008G066000 Populus trichocarpa
Potri.010G191300 Populus trichocarpa
Pp3c10_11250 Physcomitrium patens
Pp3c11_5520 Physcomitrium patens
Pp3c1_34950 Physcomitrium patens
Pp3c1_9290 Physcomitrium patens
Pp3c2_27180 Physcomitrium patens
Pp3c7_23390 Physcomitrium patens
Prupe.2G247600 Prunus persica
Psat2g033760 Pisum sativum
Psat5g126680 Pisum sativum
PSO339G1420 Papaver somniferum
RcHm_v2.0_Chr1g0369681 Rosa chinensis
Rhsim03G0141400 Rhododendron simsii
Sabra08G0048400 Salix brachista
Sabra10G0147300 Salix brachista
Sc10g0002230 Simmondsia chinensis
Sed0004569 Sechium edule
Sed0011279 Sechium edule
SEGI_13375 Sequoiadendron giganteum
SEGI_25890 Sequoiadendron giganteum
SGA_v2.0_scaffold44G16823 Striga asiatica
SGA_v2.0_scaffold60G21023 Striga asiatica
SGA_v2.0_scaffold86G26891 Striga asiatica
Sp4g22310 Schrenkiella parvula
Sp5g06640 Schrenkiella parvula
TAR633G2671 Trochodendron aralioides
THA.LOC104810079 Tarenaya hassleriana
THA.LOC104824309 Tarenaya hassleriana
Thecc.10G023200 Theobroma cacao
Thhalv10010400m.g Eutrema salsugineum
Thhalv10017972m.g Eutrema salsugineum
TPR.G2520 Trifolium pratense
TWI53G1511 Tripterygium wilfordii
TWI73G0235 Tripterygium wilfordii
unitig_37.g12017 Utricularia gibba
VMungo0540G2232 Vigna mungo
VMungo0647G1175 Vigna mungo
VMungo1383G2047 Vigna mungo
Zm00001eb147510 Zea mays
Zm00001eb367110 Zea mays

User provided reference genes

Program Settings