Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p00400 Brassica napus
A08p01020 Brassica napus
Aa31LG2G1550 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3459 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4951 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4970 Anthoceros agrestis
Actinidia04389 Actinidia chinensis
Ah.12g052950 Amaranthus hybridus
AL1G63080 Arabidopsis lyrata
Aqoxy2G01051 Aquilegia oxysepala
Aqoxy456s001 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.68E5M7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M62N24 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RT27P1 Arachis hypogaea
AT1G55090 Arabidopsis thaliana
ATR1098G082 Amborella trichopoda
Atru.chr9.1960 Acer truncatum
AUR62007020 Chenopodium quinoa
AUR62015016 Chenopodium quinoa
AUR62019884 Chenopodium quinoa
AUR62029097 Chenopodium quinoa
BcaB01g00975 Brassica carinata
BcaB01g02352 Brassica carinata
BcaB04g16998 Brassica carinata
BcaB04g16999 Brassica carinata
BcaB04g17000 Brassica carinata
BcaB04g17001 Brassica carinata
BcaB04g17002 Brassica carinata
BcaB05g22068 Brassica carinata
BcaB07g33238 Brassica carinata
BcaC01g01456 Brassica carinata
BcaC01g01457 Brassica carinata
BcaC01g01459 Brassica carinata
BcaC01g01463 Brassica carinata
BcaC08g43605 Brassica carinata
BolC3t21537H Brassica oleracea
BolC6t36080H Brassica oleracea
BraA06t23255Z Brassica rapa
BraA08t32154Z Brassica rapa
C03p92220 Brassica napus
C06p10070 Brassica napus
CAN.G567.61 Capsicum annuum
CAN.G628.62 Capsicum annuum
CANSAT54G0301 Cannabis sativa
CARHR044680 Cardamine hirsuta
CARHR106400 Cardamine hirsuta
CARHR260480 Cardamine hirsuta
Carub.0001s4358 Capsella rubella
Ca_17453_v3 Cicer arietinum L.
CBR_g19728 Chara braunii
Cc05_g02370 Coffea canephora
Cc08_g16460 Coffea canephora
Cfa011961 Carpinus fangiana
Cfa024512 Carpinus fangiana
Ciclev10019024m.g Citrus clementina
Ciclev10024991m.g Citrus clementina
CiPaw.11G115900 Carya illinoinensis
ClCG01G001820 Citrullus lanatus
COL.COLO4_10753 Corchorus olitorius
Cpa.g.sc15.11 Carica papaya
Cre10.g435250 Chlamydomonas reinhardtii
CsaV3_5G001970 Cucumis sativus L.
CSS0003453 Camellia sinensis var. sinensis
CSS0024936 Camellia sinensis var. sinensis
DCAR_006502 Daucus carota
Dinv34692 Davidia involucrata
Duzib068G0704 Durio zibethinus
ECA240G1010 Erigeron canadensis
ECA246G1101 Erigeron canadensis
EL10Ac5g12472 Beta vulgaris
EL10Ac5g12963 Beta vulgaris
Eucgr.E01025 Eucalyptus grandis
FAN04G2440 Fragaria x ananassa
FAN08G0955 Fragaria x ananassa
FAN13G0619 Fragaria x ananassa
FAN18G2619 Fragaria x ananassa
FAN18G3428 Fragaria x ananassa
FvH4_5g11490 Fragaria vesca
Glyma.05G219500 Glycine max
Glyma.08G025800 Glycine max
Glyma.17G110701 Glycine max
Gohir.A08G111640 Gossypium hirsutum
Gohir.A08G111660 Gossypium hirsutum
Gohir.D08G124600 Gossypium hirsutum
Gorai.004G131300 Gossypium raimondii
GSVIVG01019608001 Vitis vinifera
HanXRQChr03g0083671 Helianthus annuus
HanXRQChr06g0166321 Helianthus annuus
Haze_09105 Corylus avellana
Haze_09120 Corylus avellana
Hma1.2p1_0077F.1_g039630 Hydrangea macrophylla
Hma1.2p1_1835F.1_g304665 Hydrangea macrophylla
HPP92_025338 Vanilla planifolia
Hund14202 Selenicereus undatus
Lalb_Chr16g0390761 Lupinus albus
Lj2C160T5 Lonicera japonica
Lj4g0016220 Lotus japonicus
Lj4g0018300 Lotus japonicus
Lsat_1_v5_gn_6_83601 Lactuca sativa
Manes.02G005800 Manihot esculenta
Manes.02G005900 Manihot esculenta
Mapoly0035s0052 Marchantia polymorpha
MBI02_g10555_MAGBIO Magnolia biondii
MBI02_g43672_MAGBIO Magnolia biondii
MBI05_g40946_MAGBIO Magnolia biondii
MBI05_g40947_MAGBIO Magnolia biondii
MBI05_g43497_MAGBIO Magnolia biondii
MBI15_g06349_MAGBIO Magnolia biondii
MCO17G006 Micromonas commoda
MD06G1113100 Malus domestica
MD14G1134200 Malus domestica
Medtr3g108170 Medicago truncatula
Medtr8g099885 Medicago truncatula
MELO3C005756.2 Cucumis melo
Migut.E00651 Erythranthe guttata
Migut.E01630 Erythranthe guttata
MSTRG.13762 Avicennia marina
Nitab4.5_0000050g0220 Nicotiana tabacum
Nitab4.5_0000974g0050 Nicotiana tabacum
Nitab4.5_0001308g0010 Nicotiana tabacum
Nitab4.5_0001308g0060 Nicotiana tabacum
Nitab4.5_0002367g0210 Nicotiana tabacum
Nitab4.5_0002439g0120 Nicotiana tabacum
Nitab4.5_0004376g0060 Nicotiana tabacum
Nn3g20296 Nelumbo nucifera
Oeu009988.1 Olea europaea
Oeu059576.4 Olea europaea
Os07g0167100 Oryza sativa ssp. japonica
Peaxi162Scf00074g00431 Petunia axillaris
PGR042G2513 Punica granatum
PGSC0003DMG400012128 Solanum tuberosum
PGSC0003DMG400033059 Solanum tuberosum
Phvul.002G328900 Phaseolus vulgaris
Potri.001G087400 Populus trichocarpa
Potri.003G143700 Populus trichocarpa
Pp3c17_21910 Physcomitrium patens
PRCOL_00000896 Prasinoderma coloniale
Prupe.5G126000 Prunus persica
Psat7g023400 Pisum sativum
Psat7g023520 Pisum sativum
Psat7g023560 Pisum sativum
PSO017G1958 Papaver somniferum
PSO170G0459 Papaver somniferum
PSO210G1536 Papaver somniferum
PSO339G2482 Papaver somniferum
QL02p029300 Quercus lobata
RcHm_v2.0_Chr7g0186311 Rosa chinensis
Rhsim07G0079800 Rhododendron simsii
Sabra01G0063700 Salix brachista
Sabra03G0104100 Salix brachista
SalBow2G0791 Salvia bowleyana
SalBow2G1745 Salvia bowleyana
SalBow2G2362 Salvia bowleyana
SalBow2G2695 Salvia bowleyana
Sc01g0010470 Simmondsia chinensis
Sed0021355 Sechium edule
SEGI_31460 Sequoiadendron giganteum
SGA_v2.0_scaffold295G47513 Striga asiatica
SMO174G0028 Selaginella moellendorffii
SMO358G0326 Selaginella moellendorffii
Solyc06g071240.3 Solanum lycopersicum
Solyc08g082830.3 Solanum lycopersicum
Sopen06g027550 Solanum pennellii
Sopen08g031060 Solanum pennellii
Sp1g40750 Schrenkiella parvula
TAR629G1064 Trochodendron aralioides
THA.LOC104823616 Tarenaya hassleriana
Thecc.03G303200 Theobroma cacao
Thhalv10011266m.g Eutrema salsugineum
TPR.G18245 Trifolium pratense
TPR.G3395 Trifolium pratense
TPR.G3413 Trifolium pratense
TWI60G1173 Tripterygium wilfordii
unitig_21.g20891 Utricularia gibba
vmacro10679 Vaccinium macrocarpon
vmacro13870 Vaccinium macrocarpon
vmacro22441 Vaccinium macrocarpon
VMungo0251G3777 Vigna mungo
Zm00001eb094700 Zea mays

User provided reference genes

Program Settings