Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p05850 Brassica napus
A03p09680 Brassica napus
A10p19900 Brassica napus
Aa31LG4G8640 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2147 Anthoceros agrestis
Actinidia06907 Actinidia chinensis
Actinidia16334 Actinidia chinensis
Ah.04g161930 Amaranthus hybridus
Ah.06g194180 Amaranthus hybridus
AL6G31380 Arabidopsis lyrata
Aqoxy2G00137 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.11Y6U0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.13C5F2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5L0PCQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HEYT23 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V44IJD Arachis hypogaea
AT5G19855 Arabidopsis thaliana
ATR0332G008 Amborella trichopoda
Atru.chr3.2715 Acer truncatum
AUR62000123 Chenopodium quinoa
AUR62019304 Chenopodium quinoa
BcaB01g04825 Brassica carinata
BcaB01g04844 Brassica carinata
BcaB08g36566 Brassica carinata
BcaC03g13717 Brassica carinata
BcaC04g19383 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p02060 Brassica napus
BolC2t06986H Brassica oleracea
BolC3t13596H Brassica oleracea
BolC9t58499H Brassica oleracea
BraA02t05537Z Brassica rapa
BraA03t10284Z Brassica rapa
BraA10t44065Z Brassica rapa
C03p11250 Brassica napus
C09p56300 Brassica napus
CAN.G1560.2 Capsicum annuum
CAN.G599.2 Capsicum annuum
CANSAT56G1539 Cannabis sativa
CARHR193020 Cardamine hirsuta
Carub.0006s1821 Capsella rubella
Ca_14881_v3 Cicer arietinum L.
CBR_g21098 Chara braunii
Cc02_g28010 Coffea canephora
Cc10_g03220 Coffea canephora
CDE02G1666 Ceratophyllum demersum
Cfa009770 Carpinus fangiana
Ciclev10016574m.g Citrus clementina
CiPaw.13G160900 Carya illinoinensis
CiPaw.14G119100 Carya illinoinensis
ClCG02G023230 Citrullus lanatus
ClCG03G013240 Citrullus lanatus
COL.COLO4_07583 Corchorus olitorius
COL.COLO4_36675 Corchorus olitorius
Cpa.g.sc84.53 Carica papaya
CsaV3_1G042820 Cucumis sativus L.
CsaV3_4G024270 Cucumis sativus L.
CSS0039551 Camellia sinensis var. sinensis
CSS0045152 Camellia sinensis var. sinensis
DCAR_002072 Daucus carota
DCAR_003214 Daucus carota
Dinv09354 Davidia involucrata
Dinv36258 Davidia involucrata
Duzib150G1364 Durio zibethinus
Duzib170G0856 Durio zibethinus
ECA233G4357 Erigeron canadensis
ECA240G2592 Erigeron canadensis
EL10Ac4g10247 Beta vulgaris
Eucgr.B03687 Eucalyptus grandis
Eucgr.J00766 Eucalyptus grandis
FAN11G0759 Fragaria x ananassa
FAN16G3317 Fragaria x ananassa
FAN21G3604 Fragaria x ananassa
FAN25G3809 Fragaria x ananassa
FvH4_3g28850 Fragaria vesca
Glyma.08G335500 Glycine max
Glyma.14G009900 Glycine max
Glyma.18G070500 Glycine max
Gohir.A05G069400 Gossypium hirsutum
Gohir.A09G114300 Gossypium hirsutum
Gohir.D05G072300 Gossypium hirsutum
Gohir.D09G111000 Gossypium hirsutum
Gorai.006G128600 Gossypium raimondii
Gorai.009G073300 Gossypium raimondii
GSVIVG01025257001 Vitis vinifera
GSVIVG01032095001 Vitis vinifera
HanXRQChr01g0018191 Helianthus annuus
HanXRQChr02g0056201 Helianthus annuus
HanXRQChr16g0524491 Helianthus annuus
Hma1.2p1_0027F.1_g017050 Hydrangea macrophylla
HPP92_024873 Vanilla planifolia
Hund07506 Selenicereus undatus
Hund22030 Selenicereus undatus
Lalb_Chr04g0247401 Lupinus albus
Lalb_Chr04g0247641 Lupinus albus
Lalb_Chr18g0050551 Lupinus albus
Lj1A330T24 Lonicera japonica
Lj6g0021955 Lotus japonicus
Lsat_1_v5_gn_1_66000 Lactuca sativa
Lsat_1_v5_gn_4_31621 Lactuca sativa
Lsat_1_v5_gn_6_47921 Lactuca sativa
Manes.06G164200 Manihot esculenta
Manes.14G002800 Manihot esculenta
Mapoly0002s0228 Marchantia polymorpha
Mapoly0069s0007 Marchantia polymorpha
MBI02_g05665_MAGBIO Magnolia biondii
MBI04_g36752_MAGBIO Magnolia biondii
MBI04_g40116_MAGBIO Magnolia biondii
MD03G1175000 Malus domestica
MD11G1193100 Malus domestica
Medtr3g061630 Medicago truncatula
MELO3C014593.2 Cucumis melo
MELO3C015193.2 Cucumis melo
Migut.D00602 Erythranthe guttata
Migut.N02317 Erythranthe guttata
MSTRG.17029 Avicennia marina
MSTRG.18426 Avicennia marina
MSTRG.21378 Avicennia marina
MSTRG.28066 Avicennia marina
Nitab4.5_0001186g0010 Nicotiana tabacum
Nitab4.5_0001587g0060 Nicotiana tabacum
Nitab4.5_0002741g0130 Nicotiana tabacum
Nitab4.5_0004290g0020 Nicotiana tabacum
Nn2g15369 Nelumbo nucifera
Nn7g36206 Nelumbo nucifera
Oeu001480.1 Olea europaea
Oeu016684.1 Olea europaea
Os03g0807900 Oryza sativa ssp. japonica
Os07g0569600 Oryza sativa ssp. japonica
Peaxi162Scf00004g02340 Petunia axillaris
Peaxi162Scf00953g00113 Petunia axillaris
PGR102G1724 Punica granatum
PGR119G1229 Punica granatum
PGSC0003DMG400006801 Solanum tuberosum
PGSC0003DMG400007341 Solanum tuberosum
Phvul.006G062600 Phaseolus vulgaris
Phvul.008G283400 Phaseolus vulgaris
Potri.001G258100 Populus trichocarpa
Potri.009G053300 Populus trichocarpa
Pp3c12_1270 Physcomitrium patens
Pp3c9_10480 Physcomitrium patens
Prupe.4G249500 Prunus persica
Psat5g163000 Pisum sativum
PSO384G2797 Papaver somniferum
QL01p004686 Quercus lobata
RcHm_v2.0_Chr5g0052051 Rosa chinensis
Rhsim01G0191800 Rhododendron simsii
Sabra09G0038800 Salix brachista
Sabra16G0157800 Salix brachista
SalBow6G3376 Salvia bowleyana
SalBow6G5214 Salvia bowleyana
Sc09g0000720 Simmondsia chinensis
Sed0005000 Sechium edule
Sed0019717 Sechium edule
SEGI_02367 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00707 Striga asiatica
SGA_v2.0_scaffold3G01504 Striga asiatica
SGA_v2.0_scaffold8G04590 Striga asiatica
SMO275G0040 Selaginella moellendorffii
Solyc01g087190.4 Solanum lycopersicum
Solyc11g065740.2 Solanum lycopersicum
Sopen01g034250 Solanum pennellii
Sopen11g025500 Solanum pennellii
Sp6g24540 Schrenkiella parvula
TAR633G1481 Trochodendron aralioides
TAR636G2753 Trochodendron aralioides
THA.LOC104807531 Tarenaya hassleriana
THA.LOC104811066 Tarenaya hassleriana
Thecc.09G233900 Theobroma cacao
Thhalv10015929m.g Eutrema salsugineum
TPR.G30124 Trifolium pratense
TWI32G0323 Tripterygium wilfordii
TWI60G0796 Tripterygium wilfordii
unitig_22.g6202 Utricularia gibba
unitig_8.g2995 Utricularia gibba
vmacro12718 Vaccinium macrocarpon
VMungo0540G2384 Vigna mungo
VMungo0647G1030 Vigna mungo
Zm00001eb212460 Zea mays
Zm00001eb324740 Zea mays

User provided reference genes

Program Settings