Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p22460 Brassica napus
A07p27360 Brassica napus
A07p44160 Brassica napus
Aa31LG4G1970 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1694 Anthoceros agrestis
Actinidia11710 Actinidia chinensis
Actinidia17720 Actinidia chinensis
Ah.01g020350 Amaranthus hybridus
Ah.14g084510 Amaranthus hybridus
AL1G28850 Arabidopsis lyrata
AL2G39480 Arabidopsis lyrata
Aqoxy6G00358 Aquilegia oxysepala
Aqoxy6G02601 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6KK5MR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.78GTJP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F9GSXH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K7FQ1R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RANL81 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z0Z3SY Arachis hypogaea
AT1G16690 Arabidopsis thaliana
AT1G79020 Arabidopsis thaliana
ATR0626G209 Amborella trichopoda
ATR0751G140 Amborella trichopoda
ATR0751G177 Amborella trichopoda
Atru.chr3.1841 Acer truncatum
AUR62011474 Chenopodium quinoa
AUR62016582 Chenopodium quinoa
BcaB02g07192 Brassica carinata
BcaB05g25167 Brassica carinata
BcaC03g15859 Brassica carinata
BcaC08g45391 Brassica carinata
BcaC08g47466 Brassica carinata
BolC2t09627H Brassica oleracea
BolC6t38185H Brassica oleracea
BolC6t40307H Brassica oleracea
BraA02t07251Z Brassica rapa
BraA07t30377Z Brassica rapa
BraA07t31924Z Brassica rapa
C02p36140 Brassica napus
C06p30220 Brassica napus
C06p52890 Brassica napus
CAN.G1586.1 Capsicum annuum
CAN.G1600.1 Capsicum annuum
CAN.G809.69 Capsicum annuum
CANSAT01G1565 Cannabis sativa
CARHR017150 Cardamine hirsuta
CARHR072690 Cardamine hirsuta
Carub.0001s1642 Capsella rubella
Carub.0002s2589 Capsella rubella
Ca_17750_v3 Cicer arietinum L.
CBR_g38268 Chara braunii
Cc02_g36820 Coffea canephora
CDE02G1355 Ceratophyllum demersum
CDE03G0037 Ceratophyllum demersum
CDE05G0598 Ceratophyllum demersum
CDE06G2124 Ceratophyllum demersum
Cfa002157 Carpinus fangiana
Ciclev10020009m.g Citrus clementina
Ciclev10021199m.g Citrus clementina
CiPaw.01G092000 Carya illinoinensis
ClCG03G018020 Citrullus lanatus
ClCG03G018030 Citrullus lanatus
ClCG03G018040 Citrullus lanatus
COL.COLO4_26802 Corchorus olitorius
Cpa.g.sc10.19 Carica papaya
Cpa.g.sc10.20 Carica papaya
Cre03.g196400 Chlamydomonas reinhardtii
CsaV3_1G038140 Cucumis sativus L.
CSS0008969 Camellia sinensis var. sinensis
CSS0041623 Camellia sinensis var. sinensis
DCAR_022329 Daucus carota
Dinv24535 Davidia involucrata
Dinv30973 Davidia involucrata
Duzib192G0492 Durio zibethinus
Duzib235G0758 Durio zibethinus
ECA228G0002 Erigeron canadensis
ECA234G0089 Erigeron canadensis
ECA246G0124 Erigeron canadensis
EL10Ac9g21865 Beta vulgaris
Eucgr.F04066 Eucalyptus grandis
FAN05G1128 Fragaria x ananassa
FAN09G1502 Fragaria x ananassa
FAN14G1097 Fragaria x ananassa
FAN14G2559 Fragaria x ananassa
FvH4_6g36310 Fragaria vesca
Glyma.13G045600 Glycine max
Glyma.19G049500 Glycine max
Gohir.A07G077000 Gossypium hirsutum
Gohir.A10G000800 Gossypium hirsutum
Gohir.D10G001000 Gossypium hirsutum
Gorai.011G001300 Gossypium raimondii
GSVIVG01000280001 Vitis vinifera
GSVIVG01024509001 Vitis vinifera
HanXRQChr08g0234351 Helianthus annuus
HanXRQChr17g0545561 Helianthus annuus
HanXRQChr17g0570801 Helianthus annuus
Haze_16249 Corylus avellana
Haze_16250 Corylus avellana
HPP92_015734 Vanilla planifolia
Lalb_Chr04g0257491 Lupinus albus
Lalb_Chr06g0174541 Lupinus albus
Lalb_Chr21g0317801 Lupinus albus
Lj2g0000910 Lotus japonicus
Lj5C312G11 Lonicera japonica
Lsat_1_v5_gn_3_52161 Lactuca sativa
Manes.03G095300 Manihot esculenta
Manes.15G112100 Manihot esculenta
Mapoly0014s0003 Marchantia polymorpha
MBI11_g15900_MAGBIO Magnolia biondii
MBI14_g11787_MAGBIO Magnolia biondii
MCO08G116 Micromonas commoda
MD09G1170200 Malus domestica
MD17G1156900 Malus domestica
Medtr8g090035 Medicago truncatula
MELO3C015232.2 Cucumis melo
Migut.N00997 Erythranthe guttata
MSTRG.27896 Avicennia marina
MSTRG.5179 Avicennia marina
Nitab4.5_0000389g0110 Nicotiana tabacum
Nitab4.5_0000389g0130 Nicotiana tabacum
Nitab4.5_0006794g0050 Nicotiana tabacum
Nitab4.5_0013482g0010 Nicotiana tabacum
Nn7g35782 Nelumbo nucifera
Nn8g38501 Nelumbo nucifera
Oeu000173.4 Olea europaea
Oeu010600.1 Olea europaea
Oeu061917.1 Olea europaea
Os08g0338900 Oryza sativa ssp. japonica
Os09g0284600 Oryza sativa ssp. japonica
Peaxi162Scf00048g01418 Petunia axillaris
Peaxi162Scf00198g01528 Petunia axillaris
PGR102G2920 Punica granatum
PGSC0003DMG400013092 Solanum tuberosum
PGSC0003DMG400017734 Solanum tuberosum
Phvul.004G065600 Phaseolus vulgaris
Potri.014G000600 Populus trichocarpa
Pp3c16_8390 Physcomitrium patens
Pp3c23_7050 Physcomitrium patens
PRCOL_00004606 Prasinoderma coloniale
Prupe.3G028400 Prunus persica
Psat7g057280 Pisum sativum
PSO063G1610 Papaver somniferum
PSO782G4625 Papaver somniferum
QL05p085089 Quercus lobata
RcHm_v2.0_Chr2g0148321 Rosa chinensis
Rhsim11G0111800 Rhododendron simsii
Sabra14G0003200 Salix brachista
Sc24g0001760 Simmondsia chinensis
Sed0016198 Sechium edule
SEGI_11104 Sequoiadendron giganteum
SEGI_16863 Sequoiadendron giganteum
SGA_v2.0_scaffold8G04472 Striga asiatica
SHI25108 Sapria himalayana
SHI31130 Sapria himalayana
SHI39144 Sapria himalayana
SHI44505 Sapria himalayana
SHI49864 Sapria himalayana
SHI53352 Sapria himalayana
SMO367G1242 Selaginella moellendorffii
Solyc02g032300.3 Solanum lycopersicum
Solyc02g081650.3 Solanum lycopersicum
Sopen02g010650 Solanum pennellii
Sopen02g026260 Solanum pennellii
Sp1g14830 Schrenkiella parvula
Sp5g34070 Schrenkiella parvula
TAR624G0406 Trochodendron aralioides
TAR626G1553 Trochodendron aralioides
THA.LOC104808112 Tarenaya hassleriana
Thecc.06G049000 Theobroma cacao
Thhalv10007658m.g Eutrema salsugineum
Thhalv10018536m.g Eutrema salsugineum
TPR.G6290 Trifolium pratense
TWI12G0365 Tripterygium wilfordii
TWI75G0340 Tripterygium wilfordii
unitig_699.g19834 Utricularia gibba
vmacro01641 Vaccinium macrocarpon
VMungo0464G1314 Vigna mungo
Zm00001eb097400 Zea mays
Zm00001eb308950 Zea mays

User provided reference genes

Program Settings