Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p44780 Brassica napus
A07p06220 Brassica napus
Aa31sc133G100 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1648 Anthoceros agrestis
Actinidia29923 Actinidia chinensis
Actinidia38472 Actinidia chinensis
Actinidia38473 Actinidia chinensis
Actinidia38474 Actinidia chinensis
Ah.14g084990 Amaranthus hybridus
AL3G43760 Arabidopsis lyrata
Aqoxy5G02361 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.13CNWC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3W29E4 Arachis hypogaea
ATR0193G014 Amborella trichopoda
ATR0193G031 Amborella trichopoda
ATR0193G048 Amborella trichopoda
ATR0598G033 Amborella trichopoda
ATR0684G009 Amborella trichopoda
ATR0684G059 Amborella trichopoda
ATR0684G200 Amborella trichopoda
Atru.chr4.1612 Acer truncatum
Atru.chr7.1693 Acer truncatum
AUR62025189 Chenopodium quinoa
AUR62025190 Chenopodium quinoa
AUR62028984 Chenopodium quinoa
BcaB08g34515 Brassica carinata
BcaC01g03143 Brassica carinata
BolC3t17840H Brassica oleracea
BolC7t41346H Brassica oleracea
BraA03t13613Z Brassica rapa
C03p55630 Brassica napus
C07p09280 Brassica napus
CAN.G457.4 Capsicum annuum
CANSAT56G1084 Cannabis sativa
CARHR103800 Cardamine hirsuta
CARHR103810 Cardamine hirsuta
Carub.0003s2725 Capsella rubella
Ca_26333_v3 Cicer arietinum L.
CBR_g74625 Chara braunii
CBR_g74627 Chara braunii
CBR_g74629 Chara braunii
Cc06_g12030 Coffea canephora
CDE06G1176 Ceratophyllum demersum
Cfa003017 Carpinus fangiana
Ciclev10007295m.g Citrus clementina
CiPaw.03G207700 Carya illinoinensis
ClCG03G015190 Citrullus lanatus
COL.COLO4_18111 Corchorus olitorius
Cpa.g.sc28.63 Carica papaya
Cre03.g189605 Chlamydomonas reinhardtii
CsaV3_1G040850 Cucumis sativus L.
CSS0024068 Camellia sinensis var. sinensis
CSS0040077 Camellia sinensis var. sinensis
DCAR_024741 Daucus carota
DCAR_031930 Daucus carota
Dinv25567 Davidia involucrata
Dinv42377 Davidia involucrata
Duzib150G0508 Durio zibethinus
Duzib168G2095 Durio zibethinus
ECA232G2980 Erigeron canadensis
EL10Ac8g19107 Beta vulgaris
Eucgr.C00824 Eucalyptus grandis
FAN19G1850 Fragaria x ananassa
FAN26G0375 Fragaria x ananassa
FAN26G1433 Fragaria x ananassa
FAN28G2111 Fragaria x ananassa
FvH4_1g08430 Fragaria vesca
Glyma.09G068600 Glycine max
Glyma.15G176400 Glycine max
Gohir.A07G014800 Gossypium hirsutum
Gohir.D07G014500 Gossypium hirsutum
Gorai.001G015300 Gossypium raimondii
GSVIVG01015096001 Vitis vinifera
HanXRQChr12g0354081 Helianthus annuus
Haze_25986 Corylus avellana
Haze_25994 Corylus avellana
Hma1.2p1_0430F.1_g151320 Hydrangea macrophylla
Hma1.2p1_0508F.1_g168780 Hydrangea macrophylla
Hma1.2p1_0528F.1_g173040 Hydrangea macrophylla
Hma1.2p1_0980F.1_g243635 Hydrangea macrophylla
Hma1.2p1_1385F.1_g279633 Hydrangea macrophylla
HPP92_006853 Vanilla planifolia
HPP92_006870 Vanilla planifolia
HPP92_007226 Vanilla planifolia
HPP92_012481 Vanilla planifolia
HPP92_012555 Vanilla planifolia
HPP92_026934 Vanilla planifolia
HPP92_028483 Vanilla planifolia
HPP92_028551 Vanilla planifolia
Hund26018 Selenicereus undatus
Lalb_Chr11g0074291 Lupinus albus
Lj6g0005202 Lotus japonicus
Lj7A685T51 Lonicera japonica
Lsat_1_v5_gn_3_15640 Lactuca sativa
Lsat_1_v5_gn_5_141221 Lactuca sativa
Manes.16G096500 Manihot esculenta
Mapoly0010s0036 Marchantia polymorpha
MBI19_g11836_MAGBIO Magnolia biondii
MCO14G023 Micromonas commoda
MD02G1088500 Malus domestica
MD15G1215900 Malus domestica
Medtr2g041420 Medicago truncatula
MELO3C015512.2 Cucumis melo
Migut.L01552 Erythranthe guttata
MSTRG.26461 Avicennia marina
Nitab4.5_0000343g0070 Nicotiana tabacum
Nitab4.5_0001488g0030 Nicotiana tabacum
Nn8g38678 Nelumbo nucifera
Oeu018066.1 Olea europaea
Oeu041279.1 Olea europaea
Oeu051948.1 Olea europaea
Os07g0476200 Oryza sativa ssp. japonica
Peaxi162Scf00127g00018 Petunia axillaris
Peaxi162Scf00127g00019 Petunia axillaris
PGR142G3183 Punica granatum
PGSC0003DMG400019565 Solanum tuberosum
Phvul.009G228100 Phaseolus vulgaris
Potri.006G143300 Populus trichocarpa
Potri.013G064900 Populus trichocarpa
Pp3c3_17140 Physcomitrium patens
Prupe.7G201100 Prunus persica
Psat0s7528g0040 Pisum sativum
Psat1g034120 Pisum sativum
Psat1g059560 Pisum sativum
Psat1g133400 Pisum sativum
Psat1g224080 Pisum sativum
Psat4g185720 Pisum sativum
Psat6g098400 Pisum sativum
PSO135G0960 Papaver somniferum
PSO724G0120 Papaver somniferum
QL01p053501 Quercus lobata
QL03p010974 Quercus lobata
QL04p095684 Quercus lobata
QL11p000475 Quercus lobata
RcHm_v2.0_Chr2g0094531 Rosa chinensis
RcHm_v2.0_Chr5g0007121 Rosa chinensis
Rhsim01G0044300 Rhododendron simsii
Rhsim01G0044500 Rhododendron simsii
Rhsim03G0228800 Rhododendron simsii
Rhsim03G0229000 Rhododendron simsii
Sabra06G0112200 Salix brachista
Sabra06G0113500 Salix brachista
SalBow4G1287 Salvia bowleyana
Sc14g0000600 Simmondsia chinensis
Sed0009854 Sechium edule
SEGI_11752 Sequoiadendron giganteum
SEGI_15507 Sequoiadendron giganteum
SEGI_17061 Sequoiadendron giganteum
SEGI_23032 Sequoiadendron giganteum
SEGI_24391 Sequoiadendron giganteum
SEGI_25041 Sequoiadendron giganteum
SEGI_25641 Sequoiadendron giganteum
SEGI_26438 Sequoiadendron giganteum
SEGI_29160 Sequoiadendron giganteum
SEGI_33062 Sequoiadendron giganteum
SEGI_36108 Sequoiadendron giganteum
SEGI_39855 Sequoiadendron giganteum
SGA_v2.0_scaffold21G09481 Striga asiatica
SHI23794 Sapria himalayana
SMO143G0189 Selaginella moellendorffii
Solyc07g041510.3 Solanum lycopersicum
Sopen07g021070 Solanum pennellii
Sp3g24670 Schrenkiella parvula
TAR383G0300 Trochodendron aralioides
TAR383G0903 Trochodendron aralioides
TAR383G1047 Trochodendron aralioides
THA.LOC104815327 Tarenaya hassleriana
Thecc.09G079000 Theobroma cacao
Thhalv10002377m.g Eutrema salsugineum
Thhalv10002929m.g Eutrema salsugineum
Thhalv10005572m.g Eutrema salsugineum
TPR.G10985 Trifolium pratense
TPR.G28668 Trifolium pratense
TWI34G0082 Tripterygium wilfordii
unitig_8.g3529 Utricularia gibba
vmacro06329 Vaccinium macrocarpon
vmacro22673 Vaccinium macrocarpon
Zm00001eb073540 Zea mays
Zm00001eb329800 Zea mays

User provided reference genes

Program Settings