Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p17640 Brassica napus
A02p29920 Brassica napus
A07p38210 Brassica napus
Aa31LG4G10790 Aethionema arabicum
Aa31LG7G6540 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3442 Anthoceros agrestis
Actinidia02567 Actinidia chinensis
Actinidia03514 Actinidia chinensis
Actinidia05639 Actinidia chinensis
Actinidia18360 Actinidia chinensis
Actinidia23014 Actinidia chinensis
Ah.05g178350 Amaranthus hybridus
AL2G31670 Arabidopsis lyrata
Aqoxy4G01178 Aquilegia oxysepala
Aqoxy7G03411 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9B0XDD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HC95SM Arachis hypogaea
AT1G72040 Arabidopsis thaliana
ATR0661G349 Amborella trichopoda
Atru.chr13.2392 Acer truncatum
AUR62004625 Chenopodium quinoa
AUR62023520 Chenopodium quinoa
BcaB02g09679 Brassica carinata
BcaB03g14926 Brassica carinata
BcaB05g24701 Brassica carinata
BcaB05g25101 Brassica carinata
BcaB07g33153 Brassica carinata
BcaB08g34411 Brassica carinata
BcaC03g15327 Brassica carinata
BcaC07g39615 Brassica carinata
BcaC08g46654 Brassica carinata
BcaNung01810 Brassica carinata
BolC2t08983H Brassica oleracea
BolC5t31452H Brassica oleracea
BolC6t39667H Brassica oleracea
BolC8t50393H Brassica oleracea
BraA02t06810Z Brassica rapa
BraA02t08014Z Brassica rapa
BraA07t31387Z Brassica rapa
C02p29320 Brassica napus
C06p46140 Brassica napus
C08p27770 Brassica napus
CAN.G259.4 Capsicum annuum
CAN.G308.60 Capsicum annuum
CANSAT11G2580 Cannabis sativa
CARHR064840 Cardamine hirsuta
Carub.0001s2216 Capsella rubella
Carub.0002s1882 Capsella rubella
Ca_13965_v3 Cicer arietinum L.
Cc00_g06530 Coffea canephora
CDE04G1048 Ceratophyllum demersum
CDE04G1100 Ceratophyllum demersum
CDE04G1975 Ceratophyllum demersum
Cfa008134 Carpinus fangiana
Ciclev10000797m.g Citrus clementina
CiPaw.03G019400 Carya illinoinensis
CiPaw.04G012900 Carya illinoinensis
ClCG08G000380 Citrullus lanatus
COL.COLO4_03399 Corchorus olitorius
COL.COLO4_12797 Corchorus olitorius
Cpa.g.sc66.21 Carica papaya
Cre02.g095350 Chlamydomonas reinhardtii
CsaV3_5G040400 Cucumis sativus L.
CSS0012164 Camellia sinensis var. sinensis
CSS0024003 Camellia sinensis var. sinensis
CSS0041582 Camellia sinensis var. sinensis
DCAR_001082 Daucus carota
DCAR_011525 Daucus carota
Dinv02585 Davidia involucrata
Dinv41735 Davidia involucrata
Duzib116G0170 Durio zibethinus
Duzib177G0936 Durio zibethinus
ECA232G4758 Erigeron canadensis
EL10Ac1g00108 Beta vulgaris
Eucgr.F02584 Eucalyptus grandis
FAN04G0842 Fragaria x ananassa
FAN04G1012 Fragaria x ananassa
FAN08G3431 Fragaria x ananassa
FAN13G2674 Fragaria x ananassa
FAN18G3221 Fragaria x ananassa
FvH4_5g32350 Fragaria vesca
Glyma.04G256800 Glycine max
Glyma.06G324700 Glycine max
Gohir.A09G115400 Gossypium hirsutum
Gohir.D09G112200 Gossypium hirsutum
Gorai.006G130000 Gossypium raimondii
GSVIVG01012776001 Vitis vinifera
HanXRQChr09g0260531 Helianthus annuus
HanXRQChr11g0326071 Helianthus annuus
Hma1.2p1_0004F.1_g004030 Hydrangea macrophylla
HPP92_019377 Vanilla planifolia
HPP92_019380 Vanilla planifolia
HPP92_027627 Vanilla planifolia
HPP92_027628 Vanilla planifolia
Hund16787 Selenicereus undatus
Lalb_Chr05g0224761 Lupinus albus
Lalb_Chr09g0332911 Lupinus albus
Lj3g0009516 Lotus japonicus
Lj4A481T13 Lonicera japonica
Lj7A289G27 Lonicera japonica
Lsat_1_v5_gn_1_10140 Lactuca sativa
Lsat_1_v5_gn_1_10160 Lactuca sativa
Lsat_1_v5_gn_4_136101 Lactuca sativa
Manes.02G194600 Manihot esculenta
Manes.18G103500 Manihot esculenta
Mapoly0028s0143 Marchantia polymorpha
Mapoly0080s0005 Marchantia polymorpha
MBI17_g21473_MAGBIO Magnolia biondii
MCO01G353 Micromonas commoda
MD05G1093300 Malus domestica
MD10G1100400 Malus domestica
Medtr3g005360 Medicago truncatula
MELO3C022212.2 Cucumis melo
Migut.C01288 Erythranthe guttata
Migut.N03362 Erythranthe guttata
Migut.O00683 Erythranthe guttata
MSTRG.1545 Avicennia marina
Nitab4.5_0000167g0290 Nicotiana tabacum
Nitab4.5_0003010g0030 Nicotiana tabacum
Nn5g27605 Nelumbo nucifera
Oeu004740.1 Olea europaea
Oeu004742.1 Olea europaea
Oeu021226.1 Olea europaea
Oeu025391.1 Olea europaea
Os01g0874100 Oryza sativa ssp. japonica
Os05g0430200 Oryza sativa ssp. japonica
Peaxi162Scf00391g00533 Petunia axillaris
PGR042G0805 Punica granatum
PGSC0003DMG400009278 Solanum tuberosum
Phvul.005G000500 Phaseolus vulgaris
Potri.013G109400 Populus trichocarpa
Potri.019G081600 Populus trichocarpa
Pp3c12_15090 Physcomitrium patens
Pp3c15_5240 Physcomitrium patens
Pp3c4_20480 Physcomitrium patens
PRCOL_00005076 Prasinoderma coloniale
PRCOL_00007080 Prasinoderma coloniale
Prupe.1G551200 Prunus persica
Psat1g000520 Pisum sativum
PSO017G2071 Papaver somniferum
PSO063G4997 Papaver somniferum
QL09p004950 Quercus lobata
RcHm_v2.0_Chr7g0228851 Rosa chinensis
Rhsim06G0088000 Rhododendron simsii
Rhsim06G0102500 Rhododendron simsii
Sabra13G0094300 Salix brachista
Sabra19G0093200 Salix brachista
SalBow6G4536 Salvia bowleyana
SalBow6G5395 Salvia bowleyana
SalBow7G4466 Salvia bowleyana
Sc23g0001360 Simmondsia chinensis
Sed0018926 Sechium edule
SEGI_09673 Sequoiadendron giganteum
SEGI_26933 Sequoiadendron giganteum
SEGI_33946 Sequoiadendron giganteum
SGA_v2.0_scaffold118G32535 Striga asiatica
SGA_v2.0_scaffold149G36569 Striga asiatica
SGA_v2.0_scaffold24G10581 Striga asiatica
SHI35657 Sapria himalayana
SMO228G0044 Selaginella moellendorffii
Solyc11g020780.2 Solanum lycopersicum
Sopen11g010860 Solanum pennellii
Sp5g27110 Schrenkiella parvula
TAR624G0155 Trochodendron aralioides
TAR624G1033 Trochodendron aralioides
TAR628G0517 Trochodendron aralioides
THA.LOC104800120 Tarenaya hassleriana
Thecc.08G186500 Theobroma cacao
Thhalv10018309m.g Eutrema salsugineum
TPR.G25498 Trifolium pratense
TWI14G0176 Tripterygium wilfordii
TWI59G0907 Tripterygium wilfordii
unitig_0.g2129 Utricularia gibba
unitig_747.g21476 Utricularia gibba
vmacro00757 Vaccinium macrocarpon
vmacro12476 Vaccinium macrocarpon
VMungo1080G1836 Vigna mungo
Zm00001eb146250 Zea mays
Zm00001eb348750 Zea mays

User provided reference genes

Program Settings