Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p32120 Brassica napus
A09p52500 Brassica napus
A09p62510 Brassica napus
Aa31LG1G980 Aethionema arabicum
Aa31sc95G190 Aethionema arabicum
Actinidia17746 Actinidia chinensis
Actinidia31968 Actinidia chinensis
Ah.02g129450 Amaranthus hybridus
Ah.03g134780 Amaranthus hybridus
AL1G25890 Arabidopsis lyrata
AL1G25920 Arabidopsis lyrata
AL6G11440 Arabidopsis lyrata
Aqoxy4G02841 Aquilegia oxysepala
Aqoxy5G03435 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1F58IB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8KK2IT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BSX7E4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WFL4FE Arachis hypogaea
AT1G14048 Arabidopsis thaliana
AT1G14060 Arabidopsis thaliana
AT5G02210 Arabidopsis thaliana
AT5G57570 Arabidopsis thaliana
AT5G57640 Arabidopsis thaliana
ATR0559G110 Amborella trichopoda
Atru.chr11.1737 Acer truncatum
AUR62005832 Chenopodium quinoa
BcaB03g13115 Brassica carinata
BcaB08g34355 Brassica carinata
BcaB08g34356 Brassica carinata
BcaB08g34362 Brassica carinata
BcaB08g34363 Brassica carinata
BcaB08g34365 Brassica carinata
BcaC07g38717 Brassica carinata
BcaC07g41607 Brassica carinata
BolC8t49272H Brassica oleracea
BolC8t52157H Brassica oleracea
BraA08t35135Z Brassica rapa
BraA09t40680Z Brassica rapa
BraA09t41615Z Brassica rapa
C08p16470 Brassica napus
C08p46070 Brassica napus
CAN.G964.6 Capsicum annuum
CARHR014430 Cardamine hirsuta
CARHR014440 Cardamine hirsuta
CARHR014450 Cardamine hirsuta
Carub.0001s1374 Capsella rubella
Carub.0001s1375 Capsella rubella
Carub.0004s2200 Capsella rubella
Carub.0006s0105 Capsella rubella
Carub.0008s1815 Capsella rubella
Ca_08720_v3 Cicer arietinum L.
Ca_08721_v3 Cicer arietinum L.
CBR_g26201 Chara braunii
Cc11_g12680 Coffea canephora
CDE07G0815 Ceratophyllum demersum
Cfa008939 Carpinus fangiana
Ciclev10033434m.g Citrus clementina
CiPaw.06G087900 Carya illinoinensis
CiPaw.07G072500 Carya illinoinensis
ClCG05G024040 Citrullus lanatus
COL.COLO4_17583 Corchorus olitorius
COL.COLO4_27987 Corchorus olitorius
Cpa.g.sc171.23 Carica papaya
Cre14.g619950 Chlamydomonas reinhardtii
Cre15.g641700 Chlamydomonas reinhardtii
CsaV3_5G033000 Cucumis sativus L.
CSS0010298 Camellia sinensis var. sinensis
DCAR_014653 Daucus carota
Dinv16679 Davidia involucrata
Dinv34127 Davidia involucrata
Duzib251G0512 Durio zibethinus
Duzib268G0934 Durio zibethinus
ECA233G3198 Erigeron canadensis
ECA234G2637 Erigeron canadensis
EL10Ac6g13251 Beta vulgaris
Eucgr.B03201 Eucalyptus grandis
FAN01G2110 Fragaria x ananassa
FAN06G4142 Fragaria x ananassa
FAN10G1503 Fragaria x ananassa
FAN13G1900 Fragaria x ananassa
FAN18G4377 Fragaria x ananassa
FvH4_5g26420 Fragaria vesca
FvH4_7g07760 Fragaria vesca
Glyma.07G228500 Glycine max
Glyma.20G032800 Glycine max
Gohir.A11G287541 Gossypium hirsutum
Gohir.D11G305600 Gossypium hirsutum
Gohir.D11G305800 Gossypium hirsutum
Gorai.007G326500 Gossypium raimondii
HanXRQChr12g0361951 Helianthus annuus
Hma1.2p1_1079F.1_g254860 Hydrangea macrophylla
HPP92_007611 Vanilla planifolia
Lalb_Chr09g0329191 Lupinus albus
Lalb_Chr16g0385721 Lupinus albus
Lj3P1034T75 Lonicera japonica
Lj4g0017661 Lotus japonicus
Lj4g0023987 Lotus japonicus
Lj5g0017481 Lotus japonicus
Lsat_1_v5_gn_4_10781 Lactuca sativa
Lsat_1_v5_gn_8_48881 Lactuca sativa
Manes.01G033400 Manihot esculenta
Manes.08G154000 Manihot esculenta
Mapoly0074s0048 Marchantia polymorpha
Mapoly0084s0083 Marchantia polymorpha
MBI07_g22385_MAGBIO Magnolia biondii
MCO14G435 Micromonas commoda
MD04G1004200 Malus domestica
MD06G1002200 Malus domestica
Medtr4g082300 Medicago truncatula
MELO3C012121.2 Cucumis melo
Migut.L01257 Erythranthe guttata
MSTRG.2335 Avicennia marina
MSTRG.7783 Avicennia marina
Nitab4.5_0000014g0130 Nicotiana tabacum
Nitab4.5_0000391g0360 Nicotiana tabacum
Nitab4.5_0004690g0010 Nicotiana tabacum
Nitab4.5_0013306g0020 Nicotiana tabacum
Nn1g02817 Nelumbo nucifera
Nn3g17308 Nelumbo nucifera
Nn5g27527 Nelumbo nucifera
Os03g0647400 Oryza sativa ssp. japonica
Os07g0158400 Oryza sativa ssp. japonica
PGR119G2196 Punica granatum
PGSC0003DMG400002853 Solanum tuberosum
PGSC0003DMG400028395 Solanum tuberosum
Phvul.002G169800 Phaseolus vulgaris
Phvul.005G037600 Phaseolus vulgaris
Potri.013G099100 Populus trichocarpa
Potri.013G109100 Populus trichocarpa
Potri.019G081400 Populus trichocarpa
Pp3c16_17450 Physcomitrium patens
Prupe.1G004000 Prunus persica
Prupe.5G003300 Prunus persica
Psat7g156280 Pisum sativum
PSO017G6566 Papaver somniferum
PSO063G6167 Papaver somniferum
PSO478G4561 Papaver somniferum
PSO832G3806 Papaver somniferum
QL03p069280 Quercus lobata
RcHm_v2.0_Chr1g0342011 Rosa chinensis
RcHm_v2.0_Chr7g0217291 Rosa chinensis
Rhsim05G0092100 Rhododendron simsii
Rhsim12G0132500 Rhododendron simsii
RhsimUnG0183500 Rhododendron simsii
Sabra13G0083700 Salix brachista
Sabra13G0085000 Salix brachista
Sabra19G0093000 Salix brachista
SalBow1G6087 Salvia bowleyana
SalBow6G3484 Salvia bowleyana
SalBow6G4156 Salvia bowleyana
SalBow8G1644 Salvia bowleyana
SalBow8G1689 Salvia bowleyana
Sc04g0007930 Simmondsia chinensis
Sed0022737 Sechium edule
SGA_v2.0_scaffold36G14411 Striga asiatica
SGA_v2.0_scaffold455G51901 Striga asiatica
SHI14928 Sapria himalayana
SMO353G0120 Selaginella moellendorffii
Solyc04g005580.1 Solanum lycopersicum
Solyc05g013170.2 Solanum lycopersicum
Sopen04g001620 Solanum pennellii
Sopen05g007910 Solanum pennellii
Sp1g12410 Schrenkiella parvula
TAR374G1047 Trochodendron aralioides
TAR622G1013 Trochodendron aralioides
THA.LOC104805175 Tarenaya hassleriana
THA.LOC104824074 Tarenaya hassleriana
Thecc.02G340900 Theobroma cacao
Thecc.07G109400 Theobroma cacao
Thhalv10008923m.g Eutrema salsugineum
TPR.G34072 Trifolium pratense
TWI60G0224 Tripterygium wilfordii
TWI73G0721 Tripterygium wilfordii
unitig_21.g20857 Utricularia gibba
vmacro16344 Vaccinium macrocarpon
VMungo0251G2410 Vigna mungo
Zm00001eb050330 Zea mays
Zm00001eb218620 Zea mays
Zm00001eb300270 Zea mays

User provided reference genes

Program Settings