Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p05860 Brassica napus
A02p38420 Brassica napus
Aa31LG11G8730 Aethionema arabicum
Aa31sc251G50 Aethionema arabicum
Actinidia13268 Actinidia chinensis
Actinidia17831 Actinidia chinensis
Actinidia17832 Actinidia chinensis
Ah.06g192290 Amaranthus hybridus
Ah.12g063710 Amaranthus hybridus
AL7G23210 Arabidopsis lyrata
Aqoxy2G03460 Aquilegia oxysepala
Aqoxy7G01948 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3Z1QL9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9VBI51 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R0TJM1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SVL3YV Arachis hypogaea
AT4G29250 Arabidopsis thaliana
ATR0083G032 Amborella trichopoda
ATR0665G289 Amborella trichopoda
Atru.chr2.802 Acer truncatum
Atru.chr7.2228 Acer truncatum
Atru.chr7.2231 Acer truncatum
Atru.chr7.2348 Acer truncatum
Atru.chr7.2352 Acer truncatum
AUR62001021 Chenopodium quinoa
AUR62004931 Chenopodium quinoa
AUR62032357 Chenopodium quinoa
AUR62041852 Chenopodium quinoa
BcaB07g34182 Brassica carinata
BcaC03g17761 Brassica carinata
BcaC09g52043 Brassica carinata
BolC1t00642H Brassica oleracea
BolC2t11847H Brassica oleracea
BraA02t08821Z Brassica rapa
C01p06480 Brassica napus
C02p57750 Brassica napus
CANSAT54G0990 Cannabis sativa
CANSAT64G0144 Cannabis sativa
CARHR185110 Cardamine hirsuta
CARHR240470 Cardamine hirsuta
Carub.0006s2571 Capsella rubella
Carub.0007s1135 Capsella rubella
Ca_09416_v3 Cicer arietinum L.
Ca_12920_v3 Cicer arietinum L.
Cc02_g30450 Coffea canephora
Cc11_g01490 Coffea canephora
Ciclev10001131m.g Citrus clementina
Ciclev10008314m.g Citrus clementina
CiPaw.07G065600 Carya illinoinensis
CiPaw.08G014300 Carya illinoinensis
ClCG02G016560 Citrullus lanatus
COL.COLO4_15311 Corchorus olitorius
COL.COLO4_24012 Corchorus olitorius
Cpa.g.sc117.81 Carica papaya
Cpa.g.sc55.105 Carica papaya
Cpa.g.sc55.106 Carica papaya
CsaV3_2G004210 Cucumis sativus L.
CSS0036957 Camellia sinensis var. sinensis
DCAR_007686 Daucus carota
Dinv11597 Davidia involucrata
Dinv30196 Davidia involucrata
Duzib128G0249 Durio zibethinus
Duzib168G0377 Durio zibethinus
ECA246G2182 Erigeron canadensis
EL10Ac2g02560 Beta vulgaris
EL10Ac4g09121 Beta vulgaris
Eucgr.C02832 Eucalyptus grandis
FAN02G3152 Fragaria x ananassa
FAN05G1610 Fragaria x ananassa
FAN05G4998 Fragaria x ananassa
FAN09G4140 Fragaria x ananassa
FAN15G3748 Fragaria x ananassa
FAN24G0947 Fragaria x ananassa
FAN27G0381 Fragaria x ananassa
FAN27G3419 Fragaria x ananassa
FAN27G3504 Fragaria x ananassa
FvH4_2g29810 Fragaria vesca
FvH4_6g03080 Fragaria vesca
FvH4_6g03120 Fragaria vesca
Glyma.03G246600 Glycine max
Glyma.17G206400 Glycine max
Glyma.19G244100 Glycine max
GSVIVG01021823001 Vitis vinifera
GSVIVG01035782001 Vitis vinifera
HanXRQChr05g0149281 Helianthus annuus
Haze_11904 Corylus avellana
Haze_21599 Corylus avellana
HPP92_024850 Vanilla planifolia
HPP92_024851 Vanilla planifolia
HPP92_026606 Vanilla planifolia
Lalb_Chr04g0257471 Lupinus albus
Lalb_Chr06g0168041 Lupinus albus
Lj1g0006899 Lotus japonicus
Lj4g0004496 Lotus japonicus
Lj6P272T7 Lonicera japonica
Lsat_1_v5_gn_6_110001 Lactuca sativa
Manes.03G018500 Manihot esculenta
MBI01_g15494_MAGBIO Magnolia biondii
MBI11_g42452_MAGBIO Magnolia biondii
MD08G1141600 Malus domestica
MD12G1238900 Malus domestica
MD15G1118100 Malus domestica
Medtr1g011660 Medicago truncatula
Medtr7g114960 Medicago truncatula
MELO3C004373.2 Cucumis melo
Migut.A00291 Erythranthe guttata
Migut.A00295 Erythranthe guttata
Migut.N01908 Erythranthe guttata
MSTRG.11749 Avicennia marina
MSTRG.11750 Avicennia marina
MSTRG.28021 Avicennia marina
Nn1g02442 Nelumbo nucifera
Oeu021868.1 Olea europaea
Oeu030072.1 Olea europaea
Oeu031574.1 Olea europaea
PGR044G0870 Punica granatum
PGR083G0707 Punica granatum
Phvul.001G054300 Phaseolus vulgaris
Phvul.006G101000 Phaseolus vulgaris
Potri.005G052200 Populus trichocarpa
Potri.013G039700 Populus trichocarpa
Potri.018G032700 Populus trichocarpa
Prupe.1G471500 Prunus persica
Prupe.6G341800 Prunus persica
Psat3g007400 Pisum sativum
Psat3g007800 Pisum sativum
Psat6g030240 Pisum sativum
PSO017G0824 Papaver somniferum
PSO170G1855 Papaver somniferum
PSO170G4839 Papaver somniferum
PSO210G4992 Papaver somniferum
QL03p025049 Quercus lobata
QL12p024553 Quercus lobata
RcHm_v2.0_Chr3g0451351 Rosa chinensis
RcHm_v2.0_Chr5g0046431 Rosa chinensis
RcHm_v2.0_Chr5g0046531 Rosa chinensis
RcHm_v2.0_Chr6g0298831 Rosa chinensis
RcHm_v2.0_Chr6g0298841 Rosa chinensis
Rhsim02G0189500 Rhododendron simsii
Rhsim02G0189600 Rhododendron simsii
Rhsim02G0189900 Rhododendron simsii
Rhsim02G0190300 Rhododendron simsii
Rhsim02G0190700 Rhododendron simsii
Rhsim02G0190800 Rhododendron simsii
Rhsim02G0191700 Rhododendron simsii
Rhsim02G0192900 Rhododendron simsii
Rhsim05G0161300 Rhododendron simsii
RhsimUnG0038500 Rhododendron simsii
RhsimUnG0038600 Rhododendron simsii
RhsimUnG0144400 Rhododendron simsii
RhsimUnG0218800 Rhododendron simsii
Sabra05G0045900 Salix brachista
Sabra18G0033500 Salix brachista
SalBow4G0786 Salvia bowleyana
SalBow4G1128 Salvia bowleyana
Sc14g0006630 Simmondsia chinensis
Sc23g0006970 Simmondsia chinensis
Sed0006473 Sechium edule
SEGI_28149 Sequoiadendron giganteum
SGA_v2.0_scaffold329G48858 Striga asiatica
Sp2g20200 Schrenkiella parvula
Sp7g30310 Schrenkiella parvula
TAR365G0262 Trochodendron aralioides
TAR365G0792 Trochodendron aralioides
TAR383G0600 Trochodendron aralioides
THA.LOC104803631 Tarenaya hassleriana
THA.LOC104818632 Tarenaya hassleriana
Thecc.05G286300 Theobroma cacao
Thecc.09G147200 Theobroma cacao
Thhalv10004237m.g Eutrema salsugineum
Thhalv10025128m.g Eutrema salsugineum
TPR.G15662 Trifolium pratense
TPR.G20803 Trifolium pratense
TPR.G6987 Trifolium pratense
TWI34G0133 Tripterygium wilfordii
vmacro04772 Vaccinium macrocarpon
VMungo0540G0993 Vigna mungo
VMungo0647G0068 Vigna mungo
Zm00001eb057000 Zea mays

User provided reference genes

Program Settings