Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p26740 Brassica napus
A05p16560 Brassica napus
A09p28850 Brassica napus
Aa31LG9G11920 Aethionema arabicum
Aa31LG9G4130 Aethionema arabicum
Actinidia03528 Actinidia chinensis
Actinidia29373 Actinidia chinensis
Ah.05g170390 Amaranthus hybridus
AL6G43860 Arabidopsis lyrata
AL7G43110 Arabidopsis lyrata
Aqoxy5G01942 Aquilegia oxysepala
Aqoxy6G00117 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GHV9B3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N113B0 Arachis hypogaea
AT4G10080 Arabidopsis thaliana
AT4G13530 Arabidopsis thaliana
ATR1089G143 Amborella trichopoda
Atru.chr13.2495 Acer truncatum
Atru.chr13.2507 Acer truncatum
AUR62013384 Chenopodium quinoa
AUR62038535 Chenopodium quinoa
BcaB01g01449 Brassica carinata
BcaB05g23922 Brassica carinata
BcaB05g25162 Brassica carinata
BcaC03g16428 Brassica carinata
BcaC04g21012 Brassica carinata
BcaC07g37962 Brassica carinata
BcaC08g44301 Brassica carinata
BolC2t10292H Brassica oleracea
BolC6t36923H Brassica oleracea
BolC9t56498H Brassica oleracea
BraA02t07678Z Brassica rapa
BraA05t20564Z Brassica rapa
BraA09t38447Z Brassica rapa
C02p42530 Brassica napus
C06p17230 Brassica napus
C09p36670 Brassica napus
CAN.G761.10 Capsicum annuum
CAN.G761.11 Capsicum annuum
CANSAT21G0097 Cannabis sativa
CARHR219160 Cardamine hirsuta
CARHR261100 Cardamine hirsuta
CARHR261120 Cardamine hirsuta
Carub.0006s2864 Capsella rubella
Carub.0007s2901 Capsella rubella
Ca_27532_v3 Cicer arietinum L.
Cc10_g08580 Coffea canephora
CDE02G0043 Ceratophyllum demersum
CDE07G0664 Ceratophyllum demersum
CDE08G0633 Ceratophyllum demersum
Cfa008075 Carpinus fangiana
Ciclev10020185m.g Citrus clementina
CiPaw.03G014100 Carya illinoinensis
CiPaw.04G009100 Carya illinoinensis
ClCG05G024400 Citrullus lanatus
ClCG08G000760 Citrullus lanatus
ClCG11G008410 Citrullus lanatus
COL.COLO4_25146 Corchorus olitorius
Cpa.g.sc21.87 Carica papaya
CsaV3_2G033240 Cucumis sativus L.
CsaV3_5G032550 Cucumis sativus L.
CsaV3_5G039860 Cucumis sativus L.
CSS0009242 Camellia sinensis var. sinensis
CSS0015095 Camellia sinensis var. sinensis
CSS0021765 Camellia sinensis var. sinensis
CSS0025181 Camellia sinensis var. sinensis
DCAR_003510 Daucus carota
DCAR_014068 Daucus carota
Dinv22112 Davidia involucrata
Dinv37410 Davidia involucrata
Duzib177G0949 Durio zibethinus
Duzib268G0037 Durio zibethinus
ECA232G3741 Erigeron canadensis
EL10Ac1g01274 Beta vulgaris
Eucgr.F02945 Eucalyptus grandis
FAN20G2080 Fragaria x ananassa
FAN24G1984 Fragaria x ananassa
FAN27G1922 Fragaria x ananassa
FvH4_2g00770 Fragaria vesca
Glyma.04G111000 Glycine max
Glyma.06G323500 Glycine max
Gohir.A13G115500 Gossypium hirsutum
Gohir.D13G118600 Gossypium hirsutum
Gorai.013G133000 Gossypium raimondii
GSVIVG01036285001 Vitis vinifera
HanXRQChr15g0484691 Helianthus annuus
Haze_13960 Corylus avellana
Hma1.2p1_0016F.1_g010740 Hydrangea macrophylla
Hma1.2p1_0016F.1_g010745 Hydrangea macrophylla
HPP92_009210 Vanilla planifolia
Hund16917 Selenicereus undatus
Lalb_Chr15g0080071 Lupinus albus
Lj3g0022236 Lotus japonicus
Lj7A419T39 Lonicera japonica
Lsat_1_v5_gn_9_75521 Lactuca sativa
Manes.02G201800 Manihot esculenta
Manes.18G116100 Manihot esculenta
MBI03_g29107_MAGBIO Magnolia biondii
MBI06_g14322_MAGBIO Magnolia biondii
MD05G1003400 Malus domestica
MD10G1004400 Malus domestica
Medtr3g006350 Medicago truncatula
MELO3C008094.2 Cucumis melo
MELO3C012083.2 Cucumis melo
MELO3C022165.2 Cucumis melo
Migut.C01383 Erythranthe guttata
MSTRG.1601 Avicennia marina
MSTRG.22473 Avicennia marina
MSTRG.24132 Avicennia marina
Nitab4.5_0000213g0070 Nicotiana tabacum
Nitab4.5_0000283g0160 Nicotiana tabacum
Nitab4.5_0000554g0030 Nicotiana tabacum
Nitab4.5_0000980g0270 Nicotiana tabacum
Nn4g22326 Nelumbo nucifera
Nn5g27385 Nelumbo nucifera
Oeu013912.1 Olea europaea
Oeu028635.2 Olea europaea
Oeu046029.1 Olea europaea
Os01g0884700 Oryza sativa ssp. japonica
Os02g0558500 Oryza sativa ssp. japonica
Peaxi162Scf00078g00734 Petunia axillaris
PGR042G0135 Punica granatum
PGSC0003DMG400008421 Solanum tuberosum
PGSC0003DMG400012413 Solanum tuberosum
Phvul.005G002800 Phaseolus vulgaris
Potri.013G099200 Populus trichocarpa
Potri.019G071300 Populus trichocarpa
Prupe.8G006800 Prunus persica
Psat5g232160 Pisum sativum
PSO017G0683 Papaver somniferum
PSO170G4959 Papaver somniferum
QL09p001799 Quercus lobata
RcHm_v2.0_Chr6g0251151 Rosa chinensis
Rhsim12G0002900 Rhododendron simsii
Sabra13G0083800 Salix brachista
Sabra13G0085100 Salix brachista
Sabra16G0293500 Salix brachista
Sabra16G0293600 Salix brachista
Sabra16G0294500 Salix brachista
Sabra16G0296100 Salix brachista
Sabra16G0296200 Salix brachista
SalBow1G3841 Salvia bowleyana
SalBow6G4185 Salvia bowleyana
SalBow7G3598 Salvia bowleyana
Sc21g0007200 Simmondsia chinensis
Sed0021145 Sechium edule
Sed0026799 Sechium edule
SEGI_15991 Sequoiadendron giganteum
SEGI_24660 Sequoiadendron giganteum
SEGI_28614 Sequoiadendron giganteum
SEGI_35668 Sequoiadendron giganteum
SGA_v2.0_scaffold118G32614 Striga asiatica
SGA_v2.0_scaffold24G10651 Striga asiatica
Solyc07g063050.1 Solanum lycopersicum
Solyc11g040300.2 Solanum lycopersicum
Sopen07g031240 Solanum pennellii
Sopen11g018310 Solanum pennellii
Sp6g07450 Schrenkiella parvula
Sp7g11130 Schrenkiella parvula
TAR376G0450 Trochodendron aralioides
TAR628G1590 Trochodendron aralioides
THA.LOC104806752 Tarenaya hassleriana
THA.LOC104808737 Tarenaya hassleriana
THA.LOC104813368 Tarenaya hassleriana
THA.LOC104821626 Tarenaya hassleriana
Thecc.08G178800 Theobroma cacao
Thhalv10025948m.g Eutrema salsugineum
Thhalv10028826m.g Eutrema salsugineum
TPR.G25536 Trifolium pratense
TWI18G0284 Tripterygium wilfordii
TWI75G0660 Tripterygium wilfordii
unitig_37.g13076 Utricularia gibba
unitig_37.g13077 Utricularia gibba
vmacro00941 Vaccinium macrocarpon
VMungo1080G0642 Vigna mungo
Zm00001eb145550 Zea mays
Zm00001eb182290 Zea mays
Zm00001eb244090 Zea mays
Zm00001eb366050 Zea mays

User provided reference genes

Program Settings