Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p25320 Brassica napus
A09p53200 Brassica napus
Aa31LG10G15210 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2141 Anthoceros agrestis
Actinidia32928 Actinidia chinensis
Actinidia38295 Actinidia chinensis
Actinidia38296 Actinidia chinensis
AL3G13530 Arabidopsis lyrata
AL5G43380 Arabidopsis lyrata
AL8G39820 Arabidopsis lyrata
Aqoxy7G00418 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6U8ZH2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AB99XC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GU6ASX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I68A9W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WVA4TF Arachis hypogaea
AT3G61140 Arabidopsis thaliana
ATR0757G035 Amborella trichopoda
ATR0757G136 Amborella trichopoda
Atru.chr5.417 Acer truncatum
AUR62004300 Chenopodium quinoa
BcaB02g07388 Brassica carinata
BcaB02g11168 Brassica carinata
BcaB04g17067 Brassica carinata
BcaC01g03724 Brassica carinata
BcaC01g03725 Brassica carinata
BcaC07g40617 Brassica carinata
BcaC07g42655 Brassica carinata
BcaC08g45104 Brassica carinata
BolC3t17212H Brassica oleracea
BolC6t37886H Brassica oleracea
BolC8t51181H Brassica oleracea
BraA07t30175Z Brassica rapa
BraA09t40745Z Brassica rapa
C03p23120 Brassica napus
C03p49270 Brassica napus
C06p27130 Brassica napus
C08p35990 Brassica napus
CAN.G170.26 Capsicum annuum
CANSAT56G3752 Cannabis sativa
CARHR171420 Cardamine hirsuta
CARHR257760 Cardamine hirsuta
Carub.0003s3282 Capsella rubella
Carub.0005s2779 Capsella rubella
Ca_07858_v3 Cicer arietinum L.
Ca_23740_v3 Cicer arietinum L.
Ca_23745_v3 Cicer arietinum L.
Cc02_g37360 Coffea canephora
CDE02G2895 Ceratophyllum demersum
CDE11G1114 Ceratophyllum demersum
Cfa025745 Carpinus fangiana
Ciclev10020177m.g Citrus clementina
CiPaw.02G026000 Carya illinoinensis
CiPaw.02G026100 Carya illinoinensis
ClCG05G001830 Citrullus lanatus
COL.COLO4_12614 Corchorus olitorius
Cpa.g.sc18.218 Carica papaya
Cre05.g234300 Chlamydomonas reinhardtii
CsaV3_3G009220 Cucumis sativus L.
CSS0019666 Camellia sinensis var. sinensis
CSS0026628 Camellia sinensis var. sinensis
CSS0031493 Camellia sinensis var. sinensis
CSS0038711 Camellia sinensis var. sinensis
CSS0039371 Camellia sinensis var. sinensis
DCAR_016001 Daucus carota
Dinv16518 Davidia involucrata
Dinv43765 Davidia involucrata
Duzib133G0086 Durio zibethinus
Duzib138G1891 Durio zibethinus
ECA234G1945 Erigeron canadensis
EL10Ac1g00724 Beta vulgaris
EL10Ac1g00989 Beta vulgaris
Eucgr.E00211 Eucalyptus grandis
FAN01G1876 Fragaria x ananassa
FAN03G3137 Fragaria x ananassa
FAN06G3893 Fragaria x ananassa
FAN06G4052 Fragaria x ananassa
FAN10G0206 Fragaria x ananassa
FAN10G4186 Fragaria x ananassa
FvH4_7g13330 Fragaria vesca
Glyma.03G016800 Glycine max
Glyma.07G077100 Glycine max
Gohir.A05G281600 Gossypium hirsutum
Gohir.A06G193200 Gossypium hirsutum
Gohir.A11G085600 Gossypium hirsutum
Gohir.A12G104100 Gossypium hirsutum
Gohir.D11G089800 Gossypium hirsutum
Gohir.D12G107500 Gossypium hirsutum
Gorai.007G095800 Gossypium raimondii
Gorai.008G117100 Gossypium raimondii
GSVIVG01027510001 Vitis vinifera
HanXRQChr16g0523641 Helianthus annuus
HanXRQChr17g0560011 Helianthus annuus
Haze_15212 Corylus avellana
Haze_27079 Corylus avellana
Hma1.2p1_0033F.1_g020520 Hydrangea macrophylla
Hma1.2p1_0775F.1_g216560 Hydrangea macrophylla
HPP92_007366 Vanilla planifolia
HPP92_007379 Vanilla planifolia
Hund16957 Selenicereus undatus
Hund27317 Selenicereus undatus
Lalb_Chr10g0097451 Lupinus albus
Lalb_Chr17g0339991 Lupinus albus
Lj3g0009639 Lotus japonicus
Lj5g0008363 Lotus japonicus
Lj7C518G12 Lonicera japonica
Lsat_1_v5_gn_4_37061 Lactuca sativa
Lsat_1_v5_gn_9_24280 Lactuca sativa
Manes.05G039500 Manihot esculenta
Mapoly0035s0029 Marchantia polymorpha
MBI12_g36508_MAGBIO Magnolia biondii
MCO11G248 Micromonas commoda
MD01G1050400 Malus domestica
MD07G1127800 Malus domestica
Medtr6g025300 Medicago truncatula
Medtr7g076160 Medicago truncatula
Medtr8g432630 Medicago truncatula
MELO3C006142.2 Cucumis melo
Migut.B01700 Erythranthe guttata
MSTRG.20801 Avicennia marina
MSTRG.4874 Avicennia marina
Nitab4.5_0004973g0020 Nicotiana tabacum
Nitab4.5_0005109g0020 Nicotiana tabacum
Nn1g01381 Nelumbo nucifera
Oeu038681.1 Olea europaea
Os03g0116500 Oryza sativa ssp. japonica
Peaxi162Scf00021g00920 Petunia axillaris
Peaxi162Scf00233g00516 Petunia axillaris
PGR042G2189 Punica granatum
PGSC0003DMG400027768 Solanum tuberosum
Phvul.010G090500 Phaseolus vulgaris
Potri.002G154500 Populus trichocarpa
Potri.014G075500 Populus trichocarpa
Pp3c11_20980 Physcomitrium patens
Pp3c7_5660 Physcomitrium patens
PRCOL_00001778 Prasinoderma coloniale
Prupe.2G156700 Prunus persica
Psat3g113760 Pisum sativum
Psat4g151960 Pisum sativum
PSO478G4452 Papaver somniferum
PSO782G0235 Papaver somniferum
PSO782G3116 Papaver somniferum
QL08p050260 Quercus lobata
RcHm_v2.0_Chr1g0352641 Rosa chinensis
RcHm_v2.0_Chr1g0352651 Rosa chinensis
RcHm_v2.0_Chr7g0198471 Rosa chinensis
Rhsim01G0153400 Rhododendron simsii
Rhsim07G0020500 Rhododendron simsii
Sabra02G0122500 Salix brachista
Sabra14G0056300 Salix brachista
SalBow3G3192 Salvia bowleyana
Sc23g0003210 Simmondsia chinensis
Sed0001471 Sechium edule
Sed0018711 Sechium edule
SEGI_15431 Sequoiadendron giganteum
SEGI_36445 Sequoiadendron giganteum
SGA_v2.0_scaffold153G37076 Striga asiatica
SGA_v2.0_scaffold95G28865 Striga asiatica
SHI13479 Sapria himalayana
SMO365G0068 Selaginella moellendorffii
Solyc01g091650.3 Solanum lycopersicum
Sopen01g037420 Solanum pennellii
Sp5g02240 Schrenkiella parvula
TAR374G1595 Trochodendron aralioides
TAR375G0392 Trochodendron aralioides
TAR375G0585 Trochodendron aralioides
THA.LOC104802015 Tarenaya hassleriana
Thecc.01G366900 Theobroma cacao
Thhalv10005978m.g Eutrema salsugineum
TPR.G17571 Trifolium pratense
TPR.G37846 Trifolium pratense
TWI14G1012 Tripterygium wilfordii
TWI23G1177 Tripterygium wilfordii
unitig_22.g5361 Utricularia gibba
vmacro13332 Vaccinium macrocarpon
vmacro20965 Vaccinium macrocarpon
VMungo0331G1218 Vigna mungo
Zm00001eb001110 Zea mays
Zm00001eb403970 Zea mays

User provided reference genes

Program Settings