Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p37960 Brassica napus
A05p33360 Brassica napus
A06p01960 Brassica napus
A08p02270 Brassica napus
Aa31LG10G2680 Aethionema arabicum
Actinidia21679 Actinidia chinensis
Actinidia32731 Actinidia chinensis
Ah.01g021620 Amaranthus hybridus
AL1G60400 Arabidopsis lyrata
AL3G28820 Arabidopsis lyrata
Aqoxy7G01609 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.71HCYD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YBSA05 Arachis hypogaea
AT1G52230 Arabidopsis thaliana
AT3G16140 Arabidopsis thaliana
ATR0315G019 Amborella trichopoda
AUR62011659 Chenopodium quinoa
AUR62016482 Chenopodium quinoa
BcaB04g17164 Brassica carinata
BcaB04g18888 Brassica carinata
BcaB06g25707 Brassica carinata
BcaC01g01311 Brassica carinata
BcaC01g01313 Brassica carinata
BcaC05g28907 Brassica carinata
BcaC08g43379 Brassica carinata
BolC1t04783H Brassica oleracea
BolC3t21374H Brassica oleracea
BolC5t33784H Brassica oleracea
BolC6t35835H Brassica oleracea
BolC6t36544H Brassica oleracea
BraA01t03856Z Brassica rapa
BraA05t22161Z Brassica rapa
BraA06t23412Z Brassica rapa
BraA08t32272Z Brassica rapa
C01p48190 Brassica napus
C03p90500 Brassica napus
C05p50360 Brassica napus
C06p07460 Brassica napus
C06p13720 Brassica napus
CAN.G1152.5 Capsicum annuum
CAN.G438.27 Capsicum annuum
CANSAT56G1465 Cannabis sativa
CARHR042360 Cardamine hirsuta
CARHR091300 Cardamine hirsuta
Carub.0001s4120 Capsella rubella
Carub.0003s1588 Capsella rubella
CBR_g31512 Chara braunii
Cc04_g03050 Coffea canephora
CDE02G4568 Ceratophyllum demersum
CDE04G3706 Ceratophyllum demersum
Cfa002093 Carpinus fangiana
Ciclev10026722m.g Citrus clementina
CiPaw.01G235900 Carya illinoinensis
CiPaw.02G148900 Carya illinoinensis
ClCG07G013150 Citrullus lanatus
COL.COLO4_30434 Corchorus olitorius
Cpa.g.sc1182.1 Carica papaya
Cre07.g330250 Chlamydomonas reinhardtii
CsaV3_3G025000 Cucumis sativus L.
CSS0004601 Camellia sinensis var. sinensis
CSS0022866 Camellia sinensis var. sinensis
CSS0035581 Camellia sinensis var. sinensis
DCAR_023061 Daucus carota
Dinv30483 Davidia involucrata
Dinv38024 Davidia involucrata
Duzib160G0587 Durio zibethinus
Duzib192G0641 Durio zibethinus
Duzib235G0817 Durio zibethinus
ECA234G4669 Erigeron canadensis
ECA247G2331 Erigeron canadensis
EL10Ac9g22029 Beta vulgaris
Eucgr.F03038 Eucalyptus grandis
Eucgr.J02958 Eucalyptus grandis
FAN02G0928 Fragaria x ananassa
FAN05G2130 Fragaria x ananassa
FAN09G1730 Fragaria x ananassa
FAN14G2389 Fragaria x ananassa
FvH4_6g31740 Fragaria vesca
Glyma.07G019700 Glycine max
Glyma.08G204800 Glycine max
Glyma.13G357300 Glycine max
Glyma.15G016300 Glycine max
Gohir.A05G131700 Gossypium hirsutum
Gohir.D05G131200 Gossypium hirsutum
Gorai.009G134900 Gossypium raimondii
GSVIVG01017071001 Vitis vinifera
HanXRQChr10g0313451 Helianthus annuus
HanXRQChr12g0360771 Helianthus annuus
Haze_16364 Corylus avellana
Hma1.2p1_1195F.1_g265780 Hydrangea macrophylla
Hma1.2p1_3147F.1_g333153 Hydrangea macrophylla
HPP92_021482 Vanilla planifolia
Hund00643 Selenicereus undatus
Lalb_Chr14g0373231 Lupinus albus
Lalb_Chr25g0279971 Lupinus albus
Lj3g0012525 Lotus japonicus
Lsat_1_v5_gn_1_35241 Lactuca sativa
Lsat_1_v5_gn_5_130901 Lactuca sativa
Manes.04G129900 Manihot esculenta
Manes.11G038100 Manihot esculenta
Mapoly0009s0008 Marchantia polymorpha
MBI01_g07179_MAGBIO Magnolia biondii
MCO07G351 Micromonas commoda
MD02G1178900 Malus domestica
MD09G1209500 Malus domestica
MD10G1187500 Malus domestica
MD14G1193300 Malus domestica
MD17G1191200 Malus domestica
MD17G1191400 Malus domestica
Medtr2g101820 Medicago truncatula
MELO3C012971.2 Cucumis melo
Migut.D01017 Erythranthe guttata
Migut.I00942 Erythranthe guttata
MSTRG.11054 Avicennia marina
Nitab4.5_0000351g0060 Nicotiana tabacum
Nitab4.5_0001315g0130 Nicotiana tabacum
Nitab4.5_0001968g0090 Nicotiana tabacum
Nitab4.5_0002859g0140 Nicotiana tabacum
Nitab4.5_0003418g0030 Nicotiana tabacum
Nitab4.5_0018837g0020 Nicotiana tabacum
Nn2g11696 Nelumbo nucifera
Nn3g18073 Nelumbo nucifera
Oeu024071.1 Olea europaea
Oeu029644.1 Olea europaea
Os05g0560000 Oryza sativa ssp. japonica
Peaxi162Scf00015g00032 Petunia axillaris
Peaxi162Scf00034g00513 Petunia axillaris
Peaxi162Scf00207g00951 Petunia axillaris
PGR102G1204 Punica granatum
PGSC0003DMG400002626 Solanum tuberosum
PGSC0003DMG400007571 Solanum tuberosum
PGSC0003DMG400016504 Solanum tuberosum
Phvul.010G148800 Phaseolus vulgaris
Potri.003G052500 Populus trichocarpa
Pp3c15_19390 Physcomitrium patens
Pp3c9_19520 Physcomitrium patens
PRCOL_00002811 Prasinoderma coloniale
Prupe.3G067400 Prunus persica
Psat5g298080 Pisum sativum
PSO782G2129 Papaver somniferum
PSO832G3918 Papaver somniferum
QL05p021780 Quercus lobata
RcHm_v2.0_Chr2g0138931 Rosa chinensis
Rhsim08G0223300 Rhododendron simsii
Rhsim12G0200100 Rhododendron simsii
Sabra03G0026800 Salix brachista
Sc15g0001350 Simmondsia chinensis
Sed0005638 Sechium edule
Sed0024359 Sechium edule
SEGI_14279 Sequoiadendron giganteum
SGA_v2.0_scaffold5G02558 Striga asiatica
SGA_v2.0_scaffold69G23361 Striga asiatica
Solyc03g120640.3 Solanum lycopersicum
Solyc06g066640.3 Solanum lycopersicum
Solyc12g044280.2 Solanum lycopersicum
Sopen00g011820 Solanum pennellii
Sopen06g024910 Solanum pennellii
Sopen12g022520 Solanum pennellii
Sp1g38770 Schrenkiella parvula
Sp3g14500 Schrenkiella parvula
TAR383G0495 Trochodendron aralioides
TAR626G1423 Trochodendron aralioides
TAR636G2531 Trochodendron aralioides
THA.LOC104810527 Tarenaya hassleriana
THA.LOC104817982 Tarenaya hassleriana
Thecc.06G092200 Theobroma cacao
Thhalv10011814m.g Eutrema salsugineum
Thhalv10021715m.g Eutrema salsugineum
TPR.G37200 Trifolium pratense
TWI12G1021 Tripterygium wilfordii
TWI75G1362 Tripterygium wilfordii
unitig_0.g2124 Utricularia gibba
unitig_747.g21485 Utricularia gibba
vmacro16969 Vaccinium macrocarpon
vmacro18888 Vaccinium macrocarpon
VMungo0331G0764 Vigna mungo
VMungo1080G1700 Vigna mungo
Zm00001eb295610 Zea mays
Zm00001eb343540 Zea mays

User provided reference genes

Program Settings