Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p03890 Brassica napus
A10p28200 Brassica napus
Aa31LG3G18010 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2067 Anthoceros agrestis
Actinidia08082 Actinidia chinensis
Actinidia09668 Actinidia chinensis
Actinidia09669 Actinidia chinensis
Actinidia20690 Actinidia chinensis
Ah.03g133960 Amaranthus hybridus
AL6G19230 Arabidopsis lyrata
Aqoxy3G01483 Aquilegia oxysepala
Aqoxy3G01798 Aquilegia oxysepala
Aqoxy3G01811 Aquilegia oxysepala
Aqoxy7G02585 Aquilegia oxysepala
Aqoxy84s003 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.IM3BGM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VZW0IR Arachis hypogaea
AT5G08530 Arabidopsis thaliana
ATR0564G372 Amborella trichopoda
ATR0665G595 Amborella trichopoda
Atru.chr11.2285 Acer truncatum
Atru.chr11.2286 Acer truncatum
AUR62005586 Chenopodium quinoa
AUR62024144 Chenopodium quinoa
BcaB01g05588 Brassica carinata
BcaB08g37249 Brassica carinata
BcaC03g13232 Brassica carinata
BolC2t06324H Brassica oleracea
BolC2t06325H Brassica oleracea
BolC3t12971H Brassica oleracea
BolC9t59588H Brassica oleracea
BraA03t09737Z Brassica rapa
BraA10t44869Z Brassica rapa
C02p03650 Brassica napus
C03p04400 Brassica napus
C09p68410 Brassica napus
CAN.G206.61 Capsicum annuum
CANSAT64G1093 Cannabis sativa
CARHR204460 Cardamine hirsuta
Carub.0006s0748 Capsella rubella
Ca_12000_v3 Cicer arietinum L.
CBR_g30767 Chara braunii
CBR_g4558 Chara braunii
Cc11_g16710 Coffea canephora
CDE02G4050 Ceratophyllum demersum
CDE09G0709 Ceratophyllum demersum
Ciclev10033600m.g Citrus clementina
CiPaw.05G113400 Carya illinoinensis
CiPaw.06G100100 Carya illinoinensis
ClCG02G006860 Citrullus lanatus
COL.COLO4_12823 Corchorus olitorius
Cpa.g.sc257.6 Carica papaya
Cre10.g422600 Chlamydomonas reinhardtii
CsaV3_3G039600 Cucumis sativus L.
CSS0008021 Camellia sinensis var. sinensis
CSS0021164 Camellia sinensis var. sinensis
CSS0023173 Camellia sinensis var. sinensis
DCAR_007011 Daucus carota
DCAR_031187 Daucus carota
Dinv37748 Davidia involucrata
Dinv39063 Davidia involucrata
Duzib128G1406 Durio zibethinus
Duzib248G0225 Durio zibethinus
Duzib251G0884 Durio zibethinus
Duzib268G1394 Durio zibethinus
ECA232G3717 Erigeron canadensis
EL10Ac6g13463 Beta vulgaris
Eucgr.H04659 Eucalyptus grandis
FAN03G1235 Fragaria x ananassa
FAN07G1251 Fragaria x ananassa
FAN07G1961 Fragaria x ananassa
FAN08G0425 Fragaria x ananassa
FAN12G0392 Fragaria x ananassa
FAN15G0422 Fragaria x ananassa
FAN17G1814 Fragaria x ananassa
FAN22G0799 Fragaria x ananassa
FvH4_4g24110 Fragaria vesca
FvH4_7g27353 Fragaria vesca
FvH4_7g28392 Fragaria vesca
Glyma.02G003300 Glycine max
Glyma.10G005500 Glycine max
Gohir.A07G097600 Gossypium hirsutum
Gohir.A12G147700 Gossypium hirsutum
Gohir.D07G101900 Gossypium hirsutum
Gohir.D12G152000 Gossypium hirsutum
Gorai.001G109800 Gossypium raimondii
Gorai.008G164400 Gossypium raimondii
GSVIVG01013345001 Vitis vinifera
GSVIVG01020401001 Vitis vinifera
HanXRQChr09g0255191 Helianthus annuus
HanXRQChr15g0475281 Helianthus annuus
HanXRQChr15g0486841 Helianthus annuus
Haze_12379 Corylus avellana
Haze_26697 Corylus avellana
Haze_26928 Corylus avellana
HPP92_000984 Vanilla planifolia
HPP92_000985 Vanilla planifolia
Hund06074 Selenicereus undatus
Hund25446 Selenicereus undatus
Lalb_Chr01g0021001 Lupinus albus
Lalb_Chr03g0037281 Lupinus albus
Lj6g0022289 Lotus japonicus
Lj6P823T18 Lonicera japonica
Lsat_1_v5_gn_0_47760 Lactuca sativa
Lsat_1_v5_gn_4_184020 Lactuca sativa
Manes.12G014300 Manihot esculenta
Mapoly0052s0094 Marchantia polymorpha
MBI11_g06772_MAGBIO Magnolia biondii
MCO16G634 Micromonas commoda
MD13G1115400 Malus domestica
MD16G1114800 Malus domestica
MD16G1114900 Malus domestica
MD16G1115300 Malus domestica
Medtr1g042300 Medicago truncatula
MELO3C009702.2 Cucumis melo
Migut.E00031 Erythranthe guttata
MSTRG.7988 Avicennia marina
Nitab4.5_0000271g0190 Nicotiana tabacum
Nitab4.5_0000581g0020 Nicotiana tabacum
Nitab4.5_0002184g0100 Nicotiana tabacum
Nitab4.5_0027010g0010 Nicotiana tabacum
Nn1g01167 Nelumbo nucifera
Nn1g01168 Nelumbo nucifera
Nn3g16522 Nelumbo nucifera
Nn3g20865 Nelumbo nucifera
Nn4g22382 Nelumbo nucifera
Nn7g37842 Nelumbo nucifera
Nn8g40622 Nelumbo nucifera
Oeu019042.1 Olea europaea
Oeu020305.1 Olea europaea
Os07g0645400 Oryza sativa ssp. japonica
Peaxi162Scf00128g01017 Petunia axillaris
Peaxi162Scf00449g00825 Petunia axillaris
PGR119G1061 Punica granatum
PGSC0003DMG400001292 Solanum tuberosum
Phvul.007G274700 Phaseolus vulgaris
Potri.008G177801 Populus trichocarpa
Potri.010G057400 Populus trichocarpa
Pp3c12_4050 Physcomitrium patens
Pp3c13_10840 Physcomitrium patens
Pp3c3_8640 Physcomitrium patens
Pp3c4_17990 Physcomitrium patens
PRCOL_00003927 Prasinoderma coloniale
Prupe.1G231900 Prunus persica
Psat6g040120 Pisum sativum
PSO063G4816 Papaver somniferum
PSO782G1516 Papaver somniferum
QL03p054504 Quercus lobata
RcHm_v2.0_Chr4g0430891 Rosa chinensis
Rhsim12G0103900 Rhododendron simsii
Rhsim12G0153900 Rhododendron simsii
Sabra10G0047900 Salix brachista
Sc04g0010000 Simmondsia chinensis
Sed0024813 Sechium edule
Sed0026140 Sechium edule
SEGI_02035 Sequoiadendron giganteum
SGA_v2.0_scaffold1484G53963 Striga asiatica
SGA_v2.0_scaffold347G49568 Striga asiatica
SGA_v2.0_scaffold63G21760 Striga asiatica
SMO141G0212 Selaginella moellendorffii
Solyc02g087240.4 Solanum lycopersicum
Sopen02g031980 Solanum pennellii
Sp6g34370 Schrenkiella parvula
TAR374G1237 Trochodendron aralioides
TAR629G2231 Trochodendron aralioides
TAR629G2520 Trochodendron aralioides
THA.LOC104818400 Tarenaya hassleriana
THA.LOC104819362 Tarenaya hassleriana
Thecc.02G275800 Theobroma cacao
Thhalv10013394m.g Eutrema salsugineum
TPR.G25178 Trifolium pratense
TWI36G0688 Tripterygium wilfordii
TWI75G1178 Tripterygium wilfordii
unitig_21.g20878 Utricularia gibba
unitig_744.g24298 Utricularia gibba
unitig_744.g24299 Utricularia gibba
vmacro15114 Vaccinium macrocarpon
VMungo0720G1468 Vigna mungo
Zm00001eb110430 Zea mays
Zm00001eb329270 Zea mays

User provided reference genes

Program Settings