Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG5G24190 Aethionema arabicum
Aa31sc1365G20 Aethionema arabicum
Aa31sc352G20 Aethionema arabicum
Aa31sc352G50 Aethionema arabicum
Aa31sc947G20 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.632 Anthoceros agrestis
Actinidia09364 Actinidia chinensis
Actinidia17250 Actinidia chinensis
Actinidia20288 Actinidia chinensis
AL3G23850 Arabidopsis lyrata
AL6G17060 Arabidopsis lyrata
Aqoxy1G03653 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.83FBL0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8E43EG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8Q4A0R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C9C50Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C9GWT5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GXA4WU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PHL73A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S1RWR6 Arachis hypogaea
AT3G12170 Arabidopsis thaliana
AT5G06910 Arabidopsis thaliana
ATR0432G001 Amborella trichopoda
ATR0436G001 Amborella trichopoda
ATR0912G002 Amborella trichopoda
Atru.chr1.970 Acer truncatum
Atru.chr1.998 Acer truncatum
AUR62024384 Chenopodium quinoa
AUR62025971 Chenopodium quinoa
BcaB04g21091 Brassica carinata
BcaC05g29275 Brassica carinata
BcaC09g48222 Brassica carinata
BolC1t05258H Brassica oleracea
BolC5t34225H Brassica oleracea
BraA05t22511Z Brassica rapa
C01p53120 Brassica napus
CAN.G1161.3 Capsicum annuum
CARHR086750 Cardamine hirsuta
CARHR206240 Cardamine hirsuta
Carub.0003s1154 Capsella rubella
Carub.0006s0583 Capsella rubella
Carub.0130s0002 Capsella rubella
Ca_25740_v3 Cicer arietinum L.
CBR_g31684 Chara braunii
CBR_g50357 Chara braunii
Cc06_g16500 Coffea canephora
CDE05G1286 Ceratophyllum demersum
Cfa016873 Carpinus fangiana
Ciclev10005578m.g Citrus clementina
CiPaw.10G030300 Carya illinoinensis
ClCG10G017290 Citrullus lanatus
COL.COLO4_28711 Corchorus olitorius
COL.COLO4_30158 Corchorus olitorius
Cpa.g.sc92.2 Carica papaya
Cre09.g389550 Chlamydomonas reinhardtii
CsaV3_3G039120 Cucumis sativus L.
CSS0001798 Camellia sinensis var. sinensis
CSS0033131 Camellia sinensis var. sinensis
DCAR_017002 Daucus carota
Dinv18093 Davidia involucrata
Dinv36281 Davidia involucrata
Duzib093G1809 Durio zibethinus
Duzib128G1292 Durio zibethinus
ECA236G3425 Erigeron canadensis
ECA247G0427 Erigeron canadensis
EL10Ac3g06991 Beta vulgaris
Eucgr.A02407 Eucalyptus grandis
Eucgr.D00166 Eucalyptus grandis
Eucgr.D01662 Eucalyptus grandis
Eucgr.G00005 Eucalyptus grandis
Eucgr.H04357 Eucalyptus grandis
FAN04G3058 Fragaria x ananassa
FAN08G1264 Fragaria x ananassa
FvH4_5g27800 Fragaria vesca
Glyma.02G179900 Glycine max
Glyma.10G094400 Glycine max
Glyma.19G143100 Glycine max
Gohir.A01G135100 Gossypium hirsutum
Gohir.A01G195500 Gossypium hirsutum
Gohir.D01G122300 Gossypium hirsutum
Gohir.D01G185900 Gossypium hirsutum
Gorai.002G153200 Gossypium raimondii
Gorai.002G229300 Gossypium raimondii
GSVIVG01033339001 Vitis vinifera
HanXRQChr05g0132211 Helianthus annuus
HanXRQChr14g0439201 Helianthus annuus
HanXRQChr15g0491301 Helianthus annuus
Haze_19919 Corylus avellana
Hma1.2p1_0108F.1_g052075 Hydrangea macrophylla
Hma1.2p1_0247F.1_g101930 Hydrangea macrophylla
Hma1.2p1_0621F.1_g190590 Hydrangea macrophylla
Hma1.2p1_1995F.1_g310320 Hydrangea macrophylla
HPP92_003009 Vanilla planifolia
HPP92_027547 Vanilla planifolia
Hund19171 Selenicereus undatus
Lalb_Chr20g0110941 Lupinus albus
Lalb_Chr25g0287491 Lupinus albus
Lj1g0028028 Lotus japonicus
Lj4C258T4 Lonicera japonica
Lj5g0011357 Lotus japonicus
Lj7A597G67 Lonicera japonica
Lsat_1_v5_gn_8_80000 Lactuca sativa
Lsat_1_v5_gn_9_27640 Lactuca sativa
Manes.09G030000 Manihot esculenta
Mapoly0005s0205 Marchantia polymorpha
MBI04_g13619_MAGBIO Magnolia biondii
MCO03G044 Micromonas commoda
MD12G1065200 Malus domestica
MD14G1065200 Malus domestica
Medtr1g052110 Medicago truncatula
Medtr7g092380 Medicago truncatula
MELO3C000540.2 Cucumis melo
MELO3C009655.2 Cucumis melo
Migut.J01791 Erythranthe guttata
MSTRG.10828 Avicennia marina
MSTRG.26104 Avicennia marina
Nitab4.5_0000452g0120 Nicotiana tabacum
Nitab4.5_0000608g0040 Nicotiana tabacum
Nitab4.5_0000991g0120 Nicotiana tabacum
Nitab4.5_0011629g0010 Nicotiana tabacum
Nn2g15421 Nelumbo nucifera
Nn4g24599 Nelumbo nucifera
Nn5g29748 Nelumbo nucifera
Nn7g36178 Nelumbo nucifera
Oeu033773.1 Olea europaea
Os02g0195800 Oryza sativa ssp. japonica
Peaxi162Scf00003g04127 Petunia axillaris
PGR004G2357 Punica granatum
PGSC0003DMG400008182 Solanum tuberosum
Phvul.001G137200 Phaseolus vulgaris
Phvul.007G256000 Phaseolus vulgaris
Potri.006G056400 Populus trichocarpa
Potri.016G051800 Populus trichocarpa
Pp3c11_26050 Physcomitrium patens
Prupe.7G068800 Prunus persica
Psat3g071000 Pisum sativum
Psat6g089000 Pisum sativum
PSO339G0957 Papaver somniferum
PSO384G3404 Papaver somniferum
QL07p021922 Quercus lobata
RcHm_v2.0_Chr3g0480921 Rosa chinensis
Rhsim03G0011600 Rhododendron simsii
Rhsim04G0099400 Rhododendron simsii
Sc13g0002010 Simmondsia chinensis
Sed0012159 Sechium edule
Sed0023590 Sechium edule
SEGI_03407 Sequoiadendron giganteum
SGA_v2.0_scaffold105G30458 Striga asiatica
SGA_v2.0_scaffold69G23092 Striga asiatica
SMO140G0044 Selaginella moellendorffii
SMO339G0020 Selaginella moellendorffii
SMO339G0066 Selaginella moellendorffii
Solyc10g079090.3 Solanum lycopersicum
Sopen10g029730 Solanum pennellii
Sp3g10410 Schrenkiella parvula
TAR369G0992 Trochodendron aralioides
TAR623G1565 Trochodendron aralioides
TAR623G1571 Trochodendron aralioides
THA.LOC104807339 Tarenaya hassleriana
THA.LOC104819593 Tarenaya hassleriana
Thecc.05G164500 Theobroma cacao
Thhalv10014343m.g Eutrema salsugineum
Thhalv10021344m.g Eutrema salsugineum
TPR.G22785 Trifolium pratense
TPR.G3845 Trifolium pratense
TWI74G1121 Tripterygium wilfordii
TWI77G0762 Tripterygium wilfordii
unitig_736.g22293 Utricularia gibba
unitig_899.g15083 Utricularia gibba
vmacro07872 Vaccinium macrocarpon
vmacro09095 Vaccinium macrocarpon
VMungo0720G1655 Vigna mungo
VMungo1383G0990 Vigna mungo
Zm00001eb028880 Zea mays
Zm00001eb113670 Zea mays
Zm00001eb139200 Zea mays
Zm00001eb185180 Zea mays
Zm00001eb205970 Zea mays
Zm00001eb236340 Zea mays
Zm00001eb421510 Zea mays

User provided reference genes

Program Settings