Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p68180 Brassica napus
A09p15900 Brassica napus
Aa31LG4G15560 Aethionema arabicum
Aa31sc23G440 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1516 Anthoceros agrestis
Actinidia05313 Actinidia chinensis
Actinidia11257 Actinidia chinensis
Ah.02g115390 Amaranthus hybridus
AL5G25420 Arabidopsis lyrata
Aqoxy4G02928 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.817FQF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GD7L84 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JG2TRE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L1N949 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PAA8CG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q4VW5J Arachis hypogaea
AT3G46560 Arabidopsis thaliana
ATR0559G041 Amborella trichopoda
AUR62025808 Chenopodium quinoa
AUR62038108 Chenopodium quinoa
BcaB07g31364 Brassica carinata
BcaC02g10413 Brassica carinata
BcaC04g22454 Brassica carinata
BolC4t24450H Brassica oleracea
BolC9t54821H Brassica oleracea
BraA01t02647Z Brassica rapa
BraA09t37226Z Brassica rapa
C04p29160 Brassica napus
C09p19140 Brassica napus
CAN.G1195.10 Capsicum annuum
CAN.G326.7 Capsicum annuum
CANSAT54G2947 Cannabis sativa
CARHR155240 Cardamine hirsuta
Carub.0003s2691 Capsella rubella
Carub.0005s1283 Capsella rubella
Ca_19161_v3 Cicer arietinum L.
CBR_g46834 Chara braunii
Cc10_g12100 Coffea canephora
CDE07G2069 Ceratophyllum demersum
Cfa011504 Carpinus fangiana
Cfa017379 Carpinus fangiana
Ciclev10029679m.g Citrus clementina
CiPaw.09G192600 Carya illinoinensis
CiPaw.14G068400 Carya illinoinensis
ClCG10G021140 Citrullus lanatus
COL.COLO4_18508 Corchorus olitorius
Cpa.g.sc81.150 Carica papaya
Cre01.g033400 Chlamydomonas reinhardtii
CsaV3_3G034900 Cucumis sativus L.
CSS0028919 Camellia sinensis var. sinensis
CSS0038231 Camellia sinensis var. sinensis
DCAR_030095 Daucus carota
Dinv17003 Davidia involucrata
Dinv37171 Davidia involucrata
Dinv42952 Davidia involucrata
Dinv43148 Davidia involucrata
Duzib150G0578 Durio zibethinus
Duzib168G1372 Durio zibethinus
Duzib170G0179 Durio zibethinus
ECA248G1530 Erigeron canadensis
EL10Ac5g11591 Beta vulgaris
Eucgr.A01265 Eucalyptus grandis
FAN02G2377 Fragaria x ananassa
FAN09G4075 Fragaria x ananassa
FAN11G3597 Fragaria x ananassa
FAN14G4115 Fragaria x ananassa
FAN15G3467 Fragaria x ananassa
FAN16G1598 Fragaria x ananassa
FAN21G0907 Fragaria x ananassa
FAN25G1864 Fragaria x ananassa
FAN27G3302 Fragaria x ananassa
FvH4_3g36110 Fragaria vesca
FvH4_6g13690 Fragaria vesca
Glyma.03G082300 Glycine max
Glyma.11G139400 Glycine max
Glyma.12G063000 Glycine max
Gohir.A03G042066 Gossypium hirsutum
Gohir.A13G227500 Gossypium hirsutum
Gohir.D03G125700 Gossypium hirsutum
Gohir.D13G233100 Gossypium hirsutum
Gorai.003G131900 Gossypium raimondii
Gorai.013G263900 Gossypium raimondii
GSVIVG01024961001 Vitis vinifera
GSVIVG01034172001 Vitis vinifera
HanXRQChr01g0009491 Helianthus annuus
HanXRQChr05g0136091 Helianthus annuus
Haze_20791 Corylus avellana
Haze_24096 Corylus avellana
Hma1.2p1_0936F.1_g238710 Hydrangea macrophylla
Hma1.2p1_1513F.1_g287975 Hydrangea macrophylla
HPP92_018126 Vanilla planifolia
HPP92_018144 Vanilla planifolia
Hund04959 Selenicereus undatus
Hund10643 Selenicereus undatus
Lalb_Chr03g0026631 Lupinus albus
Lalb_Chr19g0137831 Lupinus albus
Lj3g0015625 Lotus japonicus
Lj3g0018643 Lotus japonicus
Lsat_1_v5_gn_4_177081 Lactuca sativa
Lsat_1_v5_gn_5_170681 Lactuca sativa
Manes.01G173900 Manihot esculenta
Manes.02G133100 Manihot esculenta
Mapoly0020s0168 Marchantia polymorpha
MBI05_g22042_MAGBIO Magnolia biondii
MBI14_g20103_MAGBIO Magnolia biondii
MCO12G250 Micromonas commoda
MD03G1093400 Malus domestica
MD04G1129100 Malus domestica
MD11G1108200 Malus domestica
MD12G1141800 Malus domestica
Medtr4g021715 Medicago truncatula
Medtr4g063925 Medicago truncatula
MELO3C009258.2 Cucumis melo
Migut.D00467 Erythranthe guttata
Migut.D01636 Erythranthe guttata
Nitab4.5_0000349g0310 Nicotiana tabacum
Nitab4.5_0001911g0090 Nicotiana tabacum
Nitab4.5_0002018g0010 Nicotiana tabacum
Nitab4.5_0006455g0030 Nicotiana tabacum
Nn2g14532 Nelumbo nucifera
Oeu014415.1 Olea europaea
Oeu032100.1 Olea europaea
Os05g0111100 Oryza sativa ssp. japonica
Os12g0571200 Oryza sativa ssp. japonica
Peaxi162Scf00165g00129 Petunia axillaris
Peaxi162Scf00330g00415 Petunia axillaris
Peaxi162Scf01517g00013 Petunia axillaris
PGR004G0102 Punica granatum
PGR102G0842 Punica granatum
PGR119G1270 Punica granatum
PGSC0003DMG400019201 Solanum tuberosum
Phvul.011G064100 Phaseolus vulgaris
Phvul.L001624 Phaseolus vulgaris
Potri.012G039100 Populus trichocarpa
Pp3c20_6200 Physcomitrium patens
Pp3c24_15930 Physcomitrium patens
PRCOL_00005138 Prasinoderma coloniale
Prupe.6G077400 Prunus persica
Prupe.6G255300 Prunus persica
Psat7g239120 Pisum sativum
PSO063G5647 Papaver somniferum
PSO339G2698 Papaver somniferum
PSO384G2795 Papaver somniferum
QL01p031927 Quercus lobata
QL07p048307 Quercus lobata
RcHm_v2.0_Chr3g0466561 Rosa chinensis
RcHm_v2.0_Chr5g0064531 Rosa chinensis
Rhsim05G0192800 Rhododendron simsii
Sabra12G0027600 Salix brachista
SalBow2G1777 Salvia bowleyana
SalBow5G2575 Salvia bowleyana
Sc05g0009640 Simmondsia chinensis
Sc20g0004910 Simmondsia chinensis
Sed0018689 Sechium edule
Sed0022625 Sechium edule
SHI25717 Sapria himalayana
SMO367G0781 Selaginella moellendorffii
Solyc08g048070.1 Solanum lycopersicum
Solyc10g086510.2 Solanum lycopersicum
Sopen10g035890 Solanum pennellii
Sp2g01740 Schrenkiella parvula
TAR369G0814 Trochodendron aralioides
TAR636G2804 Trochodendron aralioides
THA.LOC104799442 Tarenaya hassleriana
THA.LOC104810779 Tarenaya hassleriana
Thecc.09G321500 Theobroma cacao
Thhalv10002743m.g Eutrema salsugineum
Thhalv10023780m.g Eutrema salsugineum
TPR.G14480 Trifolium pratense
TPR.G17728 Trifolium pratense
TPR.G5603 Trifolium pratense
TWI31G1113 Tripterygium wilfordii
TWI36G0288 Tripterygium wilfordii
TWI75G0870 Tripterygium wilfordii
unitig_6.g29269 Utricularia gibba
unitig_744.g24379 Utricularia gibba
unitig_747.g21430 Utricularia gibba
vmacro08654 Vaccinium macrocarpon
vmacro20157 Vaccinium macrocarpon
VMungo1127G0240 Vigna mungo

User provided reference genes

Program Settings