Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p11970 Brassica napus
A03p15860 Brassica napus
A09p19840 Brassica napus
Aa31LG3G8460 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2824 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1422 Anthoceros agrestis
Actinidia05456 Actinidia chinensis
Ah.07g207450 Amaranthus hybridus
AL8G18530 Arabidopsis lyrata
AL8G26450 Arabidopsis lyrata
Aqoxy2G03595 Aquilegia oxysepala
Aqoxy2G04045 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5VC0H5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IPZV7K Arachis hypogaea
AT5G42670 Arabidopsis thaliana
AT5G52070 Arabidopsis thaliana
ATR0665G258 Amborella trichopoda
Atru.chr4.2181 Acer truncatum
AUR62002255 Chenopodium quinoa
AUR62015467 Chenopodium quinoa
BcaB01g04181 Brassica carinata
BcaB01g04182 Brassica carinata
BcaB07g31066 Brassica carinata
BcaB07g31067 Brassica carinata
BcaC01g06158 Brassica carinata
BcaC01g06162 Brassica carinata
BcaC03g14550 Brassica carinata
BcaC04g21988 Brassica carinata
BcaC06g31848 Brassica carinata
BolC2t08132H Brassica oleracea
BolC3t14250H Brassica oleracea
BolC3t14251H Brassica oleracea
BolC3t14252H Brassica oleracea
BolC9t55408H Brassica oleracea
BraA02t06261Z Brassica rapa
BraA03t10876Z Brassica rapa
BraA09t37590Z Brassica rapa
C02p19970 Brassica napus
C03p18530 Brassica napus
C03p18540 Brassica napus
C03p18580 Brassica napus
C09p25140 Brassica napus
CAN.G638.70 Capsicum annuum
CANSAT78G0297 Cannabis sativa
CARHR156760 Cardamine hirsuta
CARHR181580 Cardamine hirsuta
CARHR265010 Cardamine hirsuta
CARHR287380 Cardamine hirsuta
Carub.0008s0633 Capsella rubella
Carub.0008s1217 Capsella rubella
Ca_19732_v3 Cicer arietinum L.
CBR_g50140 Chara braunii
Cc03_g05000 Coffea canephora
CDE02G3490 Ceratophyllum demersum
Ciclev10005898m.g Citrus clementina
Ciclev10007055m.g Citrus clementina
CiPaw.02G115700 Carya illinoinensis
ClCG06G006760 Citrullus lanatus
COL.COLO4_16043 Corchorus olitorius
COL.COLO4_20681 Corchorus olitorius
Cpa.g.sc126.45 Carica papaya
Cpa.g.sc126.46 Carica papaya
Cpa.g.sc126.47 Carica papaya
CSS0040755 Camellia sinensis var. sinensis
DCAR_027287 Daucus carota
Dinv29898 Davidia involucrata
Duzib114G0251 Durio zibethinus
ECA233G4435 Erigeron canadensis
EL10Ac3g05899 Beta vulgaris
Eucgr.H03148 Eucalyptus grandis
FAN11G1859 Fragaria x ananassa
FAN11G2919 Fragaria x ananassa
FAN21G0272 Fragaria x ananassa
FAN25G1720 Fragaria x ananassa
FvH4_3g26751 Fragaria vesca
FvH4_3g28990 Fragaria vesca
Glyma.12G000500 Glycine max
Gohir.A05G398000 Gossypium hirsutum
Gohir.D04G018000 Gossypium hirsutum
Gorai.012G021000 Gossypium raimondii
GSVIVG01017372001 Vitis vinifera
GSVIVG01018132001 Vitis vinifera
HanXRQChr12g0378901 Helianthus annuus
HanXRQChr12g0386161 Helianthus annuus
HanXRQChr16g0514681 Helianthus annuus
Haze_11316 Corylus avellana
Haze_11318 Corylus avellana
HPP92_016073 Vanilla planifolia
HPP92_016088 Vanilla planifolia
HPP92_016098 Vanilla planifolia
Hund04555 Selenicereus undatus
Hund11859 Selenicereus undatus
Lalb_Chr03g0043921 Lupinus albus
Lj3C795G8 Lonicera japonica
Lj3g0013538 Lotus japonicus
Lsat_1_v5_gn_2_69300 Lactuca sativa
Lsat_1_v5_gn_5_71261 Lactuca sativa
Lsat_1_v5_gn_5_71460 Lactuca sativa
Lsat_1_v5_gn_5_72601 Lactuca sativa
Lsat_1_v5_gn_5_72621 Lactuca sativa
Lsat_1_v5_gn_7_62061 Lactuca sativa
Manes.03G168100 Manihot esculenta
Mapoly0001s0415 Marchantia polymorpha
Mapoly0013s0014 Marchantia polymorpha
MBI01_g26745_MAGBIO Magnolia biondii
MD16G1211400 Malus domestica
Medtr4g032190 Medicago truncatula
MELO3C026783.2 Cucumis melo
Migut.G00446 Erythranthe guttata
MSTRG.9921 Avicennia marina
Nitab4.5_0000436g0080 Nicotiana tabacum
Nitab4.5_0003331g0100 Nicotiana tabacum
Nitab4.5_0009720g0020 Nicotiana tabacum
Nn1g02668 Nelumbo nucifera
Oeu008802.1 Olea europaea
Os05g0140600 Oryza sativa ssp. japonica
Peaxi162Scf00019g03122 Petunia axillaris
Peaxi162Scf00024g00515 Petunia axillaris
Peaxi162Scf00204g00115 Petunia axillaris
Peaxi162Scf01247g00111 Petunia axillaris
PGR004G1248 Punica granatum
PGSC0003DMG400005308 Solanum tuberosum
PGSC0003DMG400013397 Solanum tuberosum
PGSC0003DMG400017259 Solanum tuberosum
Phvul.002G055200 Phaseolus vulgaris
Potri.008G163500 Populus trichocarpa
Pp3c1_19590 Physcomitrium patens
Prupe.1G033500 Prunus persica
Psat7g227280 Pisum sativum
PSO063G5549 Papaver somniferum
PSO170G3926 Papaver somniferum
PSO210G3069 Papaver somniferum
PSO386G0027 Papaver somniferum
PSO386G0085 Papaver somniferum
PSO386G0262 Papaver somniferum
PSO675G5794 Papaver somniferum
PSO724G0039 Papaver somniferum
PSO724G0326 Papaver somniferum
PSO724G0870 Papaver somniferum
PSO832G4205 Papaver somniferum
QL06p016008 Quercus lobata
QL06p016028 Quercus lobata
RcHm_v2.0_Chr4g0391121 Rosa chinensis
RcHm_v2.0_Chr5g0051721 Rosa chinensis
RcHm_v2.0_Chr7g0211841 Rosa chinensis
Rhsim02G0034600 Rhododendron simsii
Rhsim04G0189100 Rhododendron simsii
Sabra08G0124700 Salix brachista
SalBow2G1275 Salvia bowleyana
SalBow2G2538 Salvia bowleyana
SalBow5G0294 Salvia bowleyana
SalBow5G4944 Salvia bowleyana
SalBow5G5209 Salvia bowleyana
SalBow6G0760 Salvia bowleyana
SalBow6G3557 Salvia bowleyana
Sc19g0003450 Simmondsia chinensis
Sed0002683 Sechium edule
SEGI_04428 Sequoiadendron giganteum
SGA_v2.0_scaffold101G29803 Striga asiatica
SHI00610 Sapria himalayana
SHI00611 Sapria himalayana
SMO358G0545 Selaginella moellendorffii
Solyc03g005440.3 Solanum lycopersicum
Solyc09g089570.4 Solanum lycopersicum
Sopen03g001470 Solanum pennellii
Sopen09g032490 Solanum pennellii
Sp2g07130 Schrenkiella parvula
Sp6g14330 Schrenkiella parvula
SpUn0060_0020 Schrenkiella parvula
TAR365G0731 Trochodendron aralioides
THA.LOC104798705 Tarenaya hassleriana
Thecc.04G247900 Theobroma cacao
Thhalv10014347m.g Eutrema salsugineum
TPR.G34114 Trifolium pratense
TWI09G0161 Tripterygium wilfordii
unitig_32.g10833 Utricularia gibba
vmacro08440 Vaccinium macrocarpon
VMungo0251G0597 Vigna mungo
Zm00001eb108590 Zea mays
Zm00001eb417650 Zea mays

User provided reference genes

Program Settings