Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p19370 Brassica napus
Aa31LG8G17300 Aethionema arabicum
Aa31sc86G50 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.678 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.685 Anthoceros agrestis
Actinidia08869 Actinidia chinensis
Actinidia36803 Actinidia chinensis
Actinidia36804 Actinidia chinensis
Ah.01g020640 Amaranthus hybridus
AL4G16080 Arabidopsis lyrata
AL7G45930 Arabidopsis lyrata
Aqoxy3G00800 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.L81EPG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LEEI49 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RIH0QL Arachis hypogaea
AT2G24990 Arabidopsis thaliana
AT5G37350 Arabidopsis thaliana
ATR0559G302 Amborella trichopoda
Atru.chr9.1128 Acer truncatum
AUR62003032 Chenopodium quinoa
AUR62007839 Chenopodium quinoa
AUR62028258 Chenopodium quinoa
BcaB06g28028 Brassica carinata
BcaC02g08384 Brassica carinata
BcaC07g40899 Brassica carinata
BolC4t27030H Brassica oleracea
BolC8t51470H Brassica oleracea
BolC8t51471H Brassica oleracea
BraA04t17533Z Brassica rapa
C04p54940 Brassica napus
C08p38970 Brassica napus
CAN.G774.2 Capsicum annuum
CANSAT80G0729 Cannabis sativa
CARHR116740 Cardamine hirsuta
Carub.0004s0455 Capsella rubella
Ca_07893_v3 Cicer arietinum L.
Ca_28300_v3 Cicer arietinum L.
CBR_g61467 Chara braunii
CBR_g61468 Chara braunii
Cc10_g13370 Coffea canephora
Cc10_g13400 Coffea canephora
CDE05G1919 Ceratophyllum demersum
CDE05G2345 Ceratophyllum demersum
Cfa015653 Carpinus fangiana
Cfa023770 Carpinus fangiana
Ciclev10018838m.g Citrus clementina
CiPaw.05G188800 Carya illinoinensis
CiPaw.12G042900 Carya illinoinensis
CiPaw.15G056500 Carya illinoinensis
ClCG01G014690 Citrullus lanatus
COL.COLO4_09285 Corchorus olitorius
COL.COLO4_09286 Corchorus olitorius
COL.COLO4_28121 Corchorus olitorius
Cpa.g.sc250.13 Carica papaya
Cre13.g580900 Chlamydomonas reinhardtii
CsaV3_1G007630 Cucumis sativus L.
CSS0032323 Camellia sinensis var. sinensis
DCAR_001872 Daucus carota
DCAR_007996 Daucus carota
DCAR_021618 Daucus carota
DCAR_029022 Daucus carota
Dinv23145 Davidia involucrata
Duzib205G0757 Durio zibethinus
ECA247G4076 Erigeron canadensis
EL10Ac9g21903 Beta vulgaris
Eucgr.E01497 Eucalyptus grandis
FAN04G1110 Fragaria x ananassa
FAN04G2874 Fragaria x ananassa
FAN08G1033 Fragaria x ananassa
FAN08G1067 Fragaria x ananassa
FAN08G1590 Fragaria x ananassa
FAN13G0915 Fragaria x ananassa
FAN13G2455 Fragaria x ananassa
FAN16G2509 Fragaria x ananassa
FAN18G4532 Fragaria x ananassa
FAN20G1682 Fragaria x ananassa
FAN21G1362 Fragaria x ananassa
FAN25G1437 Fragaria x ananassa
FvH4_5g08310 Fragaria vesca
FvH4_5g16770 Fragaria vesca
FvH4_5g25261 Fragaria vesca
Glyma.09G261800 Glycine max
Glyma.18G230300 Glycine max
Gohir.A03G052800 Gossypium hirsutum
Gohir.D03G114300 Gossypium hirsutum
Gorai.003G120600 Gossypium raimondii
GSVIVG01008542001 Vitis vinifera
HanXRQChr02g0034711 Helianthus annuus
HanXRQChr13g0426321 Helianthus annuus
Haze_07135 Corylus avellana
Haze_09759 Corylus avellana
Haze_27048 Corylus avellana
Hma1.2p1_0014F.1_g009460 Hydrangea macrophylla
HPP92_020969 Vanilla planifolia
Hund02439 Selenicereus undatus
Lalb_Chr01g0021111 Lupinus albus
Lj1g0027711 Lotus japonicus
Lj5C96T4 Lonicera japonica
Lj7A11G39 Lonicera japonica
Lj7A12G15 Lonicera japonica
Lj7A12G16 Lonicera japonica
Lsat_1_v5_gn_1_28960 Lactuca sativa
Manes.06G119400 Manihot esculenta
Mapoly0084s0039 Marchantia polymorpha
MBI07_g31017_MAGBIO Magnolia biondii
MCO12G200 Micromonas commoda
MD06G1142000 Malus domestica
MD14G1157300 Malus domestica
Medtr6g024025 Medicago truncatula
Medtr7g012400 Medicago truncatula
Medtr7g076710 Medicago truncatula
Medtr7g090710 Medicago truncatula
MELO3C002182.2 Cucumis melo
Migut.N03254 Erythranthe guttata
Nitab4.5_0005642g0040 Nicotiana tabacum
Nitab4.5_0006042g0010 Nicotiana tabacum
Nn4g22329 Nelumbo nucifera
Oeu001550.1 Olea europaea
Os07g0162300 Oryza sativa ssp. japonica
Peaxi162Scf00119g00520 Petunia axillaris
PGR004G1062 Punica granatum
PGSC0003DMG400012349 Solanum tuberosum
Phvul.008G067600 Phaseolus vulgaris
Potri.015G096100 Populus trichocarpa
Pp3c21_1450 Physcomitrium patens
PRCOL_00003781 Prasinoderma coloniale
Prupe.5G151200 Prunus persica
Psat3g110800 Pisum sativum
PSO017G3328 Papaver somniferum
PSO063G1302 Papaver somniferum
PSO170G3101 Papaver somniferum
PSO170G6136 Papaver somniferum
PSO421G0376 Papaver somniferum
PSO423G0213 Papaver somniferum
PSO478G4955 Papaver somniferum
PSO675G5360 Papaver somniferum
PSO724G0964 Papaver somniferum
PSO724G1140 Papaver somniferum
PSO724G1315 Papaver somniferum
QL10p002959 Quercus lobata
RcHm_v2.0_Chr5g0020401 Rosa chinensis
RcHm_v2.0_Chr5g0063241 Rosa chinensis
RcHm_v2.0_Chr5g0063291 Rosa chinensis
RcHm_v2.0_Chr7g0190211 Rosa chinensis
Rhsim10G0051500 Rhododendron simsii
Rhsim12G0174400 Rhododendron simsii
Sabra15G0116900 Salix brachista
SalBow6G4120 Salvia bowleyana
SalBow7G4372 Salvia bowleyana
Sc10g0010460 Simmondsia chinensis
Sed0027713 Sechium edule
SEGI_19941 Sequoiadendron giganteum
SGA_v2.0_scaffold28G11963 Striga asiatica
SGA_v2.0_scaffold2G01192 Striga asiatica
SHI21367 Sapria himalayana
SHI21468 Sapria himalayana
SMO117G0291 Selaginella moellendorffii
Solyc08g080850.4 Solanum lycopersicum
Sopen08g029150 Solanum pennellii
Sp4g03970 Schrenkiella parvula
TAR371G0204 Trochodendron aralioides
TAR625G0709 Trochodendron aralioides
TAR629G0830 Trochodendron aralioides
THA.LOC104800505 Tarenaya hassleriana
Thecc.03G129000 Theobroma cacao
Thhalv10000120m.g Eutrema salsugineum
TPR.G21069 Trifolium pratense
TPR.G23280 Trifolium pratense
TPR.G23288 Trifolium pratense
TPR.G2433 Trifolium pratense
TWI23G0194 Tripterygium wilfordii
unitig_21.g20184 Utricularia gibba
vmacro16677 Vaccinium macrocarpon
VMungo1383G2243 Vigna mungo
VMungo1383G3568 Vigna mungo
Zm00001eb103140 Zea mays
Zm00001eb256780 Zea mays
Zm00001eb256800 Zea mays
Zm00001eb256810 Zea mays
Zm00001eb256840 Zea mays

User provided reference genes

Program Settings