Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p35360 Brassica napus
A03p41100 Brassica napus
A06p03570 Brassica napus
Aa31LG10G4390 Aethionema arabicum
Aa31LG8G5960 Aethionema arabicum
Actinidia00451 Actinidia chinensis
Actinidia00452 Actinidia chinensis
Actinidia12961 Actinidia chinensis
Actinidia12962 Actinidia chinensis
Ah.01g020190 Amaranthus hybridus
AL1G57020 Arabidopsis lyrata
AL3G32540 Arabidopsis lyrata
Aqoxy6G01362 Aquilegia oxysepala
Aqoxy7G03045 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7G1ZKD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.920WM2 Arachis hypogaea
AT1G49630 Arabidopsis thaliana
AT3G19170 Arabidopsis thaliana
ATR0100G044 Amborella trichopoda
Atru.chr5.2744 Acer truncatum
Atru.chr5.2745 Acer truncatum
Atru.chr5.2746 Acer truncatum
AUR62011441 Chenopodium quinoa
AUR62016621 Chenopodium quinoa
BcaB04g19030 Brassica carinata
BcaB07g33638 Brassica carinata
BcaC01g03642 Brassica carinata
BcaC08g43166 Brassica carinata
BolC1t04455H Brassica oleracea
BolC3t17311H Brassica oleracea
BolC6t35586H Brassica oleracea
BraA01t03617Z Brassica rapa
BraA03t13267Z Brassica rapa
BraA06t23565Z Brassica rapa
C01p44870 Brassica napus
C01p45010 Brassica napus
C03p50190 Brassica napus
C06p04590 Brassica napus
CAN.G1041.6 Capsicum annuum
CAN.G1041.7 Capsicum annuum
CAN.G241.30 Capsicum annuum
CARHR039670 Cardamine hirsuta
CARHR094570 Cardamine hirsuta
Carub.0001s3883 Capsella rubella
Carub.0003s1899 Capsella rubella
Ca_24336_v3 Cicer arietinum L.
CBR_g17894 Chara braunii
CBR_g29853 Chara braunii
CBR_g30953 Chara braunii
CBR_g30954 Chara braunii
CBR_g53546 Chara braunii
CBR_g53548 Chara braunii
Cc02_g18640 Coffea canephora
CDE10G0143 Ceratophyllum demersum
Cfa005469 Carpinus fangiana
Cfa026983 Carpinus fangiana
Ciclev10027722m.g Citrus clementina
Ciclev10029929m.g Citrus clementina
Ciclev10030315m.g Citrus clementina
CiPaw.05G052400 Carya illinoinensis
ClCG02G005810 Citrullus lanatus
ClCG02G005830 Citrullus lanatus
COL.COLO4_14247 Corchorus olitorius
COL.COLO4_32675 Corchorus olitorius
Cpa.g.sc62.29 Carica papaya
Cre01.g020918 Chlamydomonas reinhardtii
CsaV3_7G008690 Cucumis sativus L.
CSS0001000 Camellia sinensis var. sinensis
DCAR_001621 Daucus carota
DCAR_001622 Daucus carota
DCAR_029027 Daucus carota
Dinv23608 Davidia involucrata
Dinv42141 Davidia involucrata
Duzib052G0714 Durio zibethinus
ECA234G3461 Erigeron canadensis
ECA238G1787 Erigeron canadensis
EL10Ac9g21832 Beta vulgaris
Eucgr.G01465 Eucalyptus grandis
FAN15G0137 Fragaria x ananassa
FAN20G0084 Fragaria x ananassa
FAN24G2426 Fragaria x ananassa
FAN27G3432 Fragaria x ananassa
FvH4_2g06380 Fragaria vesca
Glyma.01G244900 Glycine max
Gohir.A04G120800 Gossypium hirsutum
Gohir.D04G162300 Gossypium hirsutum
Gorai.012G150300 Gossypium raimondii
GSVIVG01031766001 Vitis vinifera
HanXRQChr07g0196921 Helianthus annuus
HanXRQChr10g0301751 Helianthus annuus
Haze_01842 Corylus avellana
Haze_01847 Corylus avellana
HPP92_005967 Vanilla planifolia
HPP92_005974 Vanilla planifolia
Hund00328 Selenicereus undatus
Lalb_Chr16g0376231 Lupinus albus
Lj1g0003010 Lotus japonicus
Lj5A208T46 Lonicera japonica
Lj5A208T47 Lonicera japonica
Lsat_1_v5_gn_1_14301 Lactuca sativa
Lsat_1_v5_gn_2_29981 Lactuca sativa
Lsat_1_v5_gn_5_112961 Lactuca sativa
Manes.10G066200 Manihot esculenta
Mapoly0138s0034 Marchantia polymorpha
Mapoly0138s0035 Marchantia polymorpha
Mapoly0138s0037 Marchantia polymorpha
Mapoly0813s0001 Marchantia polymorpha
MBI06_g04502_MAGBIO Magnolia biondii
MCO05G354 Micromonas commoda
MCO14G172 Micromonas commoda
MD05G1077600 Malus domestica
MD05G1077700 Malus domestica
MD05G1077900 Malus domestica
MD05G1078000 Malus domestica
MD05G1078300 Malus domestica
MD05G1078400 Malus domestica
MD05G1078600 Malus domestica
MD05G1078700 Malus domestica
MD07G1090800 Malus domestica
MD10G1092200 Malus domestica
MD11G1150900 Malus domestica
Medtr5g004680 Medicago truncatula
MELO3C018441.2 Cucumis melo
Migut.B00330 Erythranthe guttata
MSTRG.16753 Avicennia marina
Nitab4.5_0001899g0100 Nicotiana tabacum
Nitab4.5_0002097g0080 Nicotiana tabacum
Nn5g30224 Nelumbo nucifera
Oeu007277.1 Olea europaea
Os02g0761400 Oryza sativa ssp. japonica
Peaxi162Scf00016g01731 Petunia axillaris
PGR042G3302 Punica granatum
PGSC0003DMG400025820 Solanum tuberosum
Phvul.002G054400 Phaseolus vulgaris
Potri.004G142300 Populus trichocarpa
Potri.009G103700 Populus trichocarpa
Pp3c5_3160 Physcomitrium patens
PRCOL_00004407 Prasinoderma coloniale
PRCOL_00005085 Prasinoderma coloniale
PRCOL_00005679 Prasinoderma coloniale
Prupe.8G122100 Prunus persica
Prupe.8G122200 Prunus persica
Psat4g213560 Pisum sativum
PSO541G0814 Papaver somniferum
PSO675G1899 Papaver somniferum
QL11p036227 Quercus lobata
RcHm_v2.0_Chr6g0258261 Rosa chinensis
Rhsim11G0167000 Rhododendron simsii
Sabra04G0094100 Salix brachista
Sabra09G0079400 Salix brachista
SalBow6G4323 Salvia bowleyana
Sc08g0000010 Simmondsia chinensis
Sc23g0007040 Simmondsia chinensis
Sed0020763 Sechium edule
SEGI_22772 Sequoiadendron giganteum
SEGI_28735 Sequoiadendron giganteum
SEGI_28882 Sequoiadendron giganteum
SGA_v2.0_scaffold32G13071 Striga asiatica
SGA_v2.0_scaffold90G27671 Striga asiatica
SHI05876 Sapria himalayana
SHI05877 Sapria himalayana
SHI06221 Sapria himalayana
SMO169G0211 Selaginella moellendorffii
Solyc01g108600.3 Solanum lycopersicum
Sopen01g050820 Solanum pennellii
Sp1g36500 Schrenkiella parvula
Sp3g17240 Schrenkiella parvula
TAR381G1366 Trochodendron aralioides
THA.LOC104801598 Tarenaya hassleriana
THA.LOC104818544 Tarenaya hassleriana
Thecc.02G098600 Theobroma cacao
Thhalv10011199m.g Eutrema salsugineum
Thhalv10019955m.g Eutrema salsugineum
TPR.G21611 Trifolium pratense
TWI79G1596 Tripterygium wilfordii
unitig_21.g20751 Utricularia gibba
vmacro02191 Vaccinium macrocarpon
VMungo1215G1975 Vigna mungo
VMungo1309G1152 Vigna mungo
Zm00001eb255690 Zea mays

User provided reference genes

Program Settings