Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p45880 Brassica napus
A03p45890 Brassica napus
A07p04500 Brassica napus
A09p11030 Brassica napus
Aa31LG10G12850 Aethionema arabicum
Aa31LG8G13840 Aethionema arabicum
Actinidia00577 Actinidia chinensis
Actinidia02250 Actinidia chinensis
Actinidia20473 Actinidia chinensis
Ah.01g018690 Amaranthus hybridus
Ah.01g018700 Amaranthus hybridus
AL3G49110 Arabidopsis lyrata
AL6G49210 Arabidopsis lyrata
Aqoxy3G00105 Aquilegia oxysepala
Aqoxy6G02342 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1WM9G2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.29MT7J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3VNM1Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DJ2H3Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E6R97N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EIL6RR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JJ9I6U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QESS4Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VP2AIV Arachis hypogaea
AT1G72590 Arabidopsis thaliana
AT2G16530 Arabidopsis thaliana
AT3G43840 Arabidopsis thaliana
ATR0149G029 Amborella trichopoda
Atru.chr5.3157 Acer truncatum
Atru.chr5.3158 Acer truncatum
Atru.chr5.3170 Acer truncatum
AUR62010373 Chenopodium quinoa
AUR62016846 Chenopodium quinoa
BcaB03g16370 Brassica carinata
BcaB08g34654 Brassica carinata
BcaC01g03005 Brassica carinata
BcaC01g03007 Brassica carinata
BcaC04g23013 Brassica carinata
BcaC04g23014 Brassica carinata
BcaC06g36152 Brassica carinata
BolC3t18001H Brassica oleracea
BolC3t18002H Brassica oleracea
BolC7t41138H Brassica oleracea
BolC9t54197H Brassica oleracea
BraA03t13718Z Brassica rapa
BraA03t13719Z Brassica rapa
BraA07t28241Z Brassica rapa
BraA09t36743Z Brassica rapa
C03p57250 Brassica napus
C03p57260 Brassica napus
C07p07190 Brassica napus
C09p13040 Brassica napus
CAN.G170.108 Capsicum annuum
CANSAT11G1548 Cannabis sativa
CARHR106750 Cardamine hirsuta
Carub.0003s3031 Capsella rubella
Ca_20939_v3 Cicer arietinum L.
CBR_g38102 Chara braunii
Cc02_g16850 Coffea canephora
CDE04G0582 Ceratophyllum demersum
Ciclev10028796m.g Citrus clementina
CiPaw.05G074000 Carya illinoinensis
CiPaw.06G127600 Carya illinoinensis
ClCG02G004480 Citrullus lanatus
COL.COLO4_10619 Corchorus olitorius
COL.COLO4_21950 Corchorus olitorius
Cpa.g.sc150.10 Carica papaya
Cre17.g720950 Chlamydomonas reinhardtii
CsaV3_7G000470 Cucumis sativus L.
CSS0003544 Camellia sinensis var. sinensis
DCAR_029109 Daucus carota
Dinv41992 Davidia involucrata
Duzib147G1035 Durio zibethinus
Duzib187G0007 Durio zibethinus
Duzib248G1248 Durio zibethinus
ECA246G0289 Erigeron canadensis
ECA248G3380 Erigeron canadensis
EL10Ac9g21623 Beta vulgaris
Eucgr.G01738 Eucalyptus grandis
Eucgr.H01470 Eucalyptus grandis
FAN15G1017 Fragaria x ananassa
FAN15G1606 Fragaria x ananassa
FAN20G2911 Fragaria x ananassa
FAN24G1697 Fragaria x ananassa
FAN27G2026 Fragaria x ananassa
FvH4_2g10631 Fragaria vesca
FvH4_2g10640 Fragaria vesca
Glyma.11G110300 Glycine max
Glyma.12G036600 Glycine max
Gohir.A02G169600 Gossypium hirsutum
Gohir.A10G241100 Gossypium hirsutum
Gohir.A13G086490 Gossypium hirsutum
Gohir.A13G086535 Gossypium hirsutum
Gohir.D03G010400 Gossypium hirsutum
Gohir.D10G253300 Gossypium hirsutum
Gohir.D13G096525 Gossypium hirsutum
Gorai.001G243600 Gossypium raimondii
Gorai.003G010800 Gossypium raimondii
Gorai.011G293600 Gossypium raimondii
GSVIVG01018810001 Vitis vinifera
GSVIVG01024163001 Vitis vinifera
HanXRQChr15g0478351 Helianthus annuus
HanXRQChr17g0544071 Helianthus annuus
HanXRQChr17g0544321 Helianthus annuus
Haze_02230 Corylus avellana
Hma1.2p1_0066F.1_g035740 Hydrangea macrophylla
Hma1.2p1_0218F.1_g092290 Hydrangea macrophylla
HPP92_014428 Vanilla planifolia
Hund00176 Selenicereus undatus
Hund00184 Selenicereus undatus
Lalb_Chr01g0002121 Lupinus albus
Lj3g0001283 Lotus japonicus
Lj5A188T38 Lonicera japonica
Lsat_1_v5_gn_3_44301 Lactuca sativa
Lsat_1_v5_gn_3_44541 Lactuca sativa
Lsat_1_v5_gn_3_44581 Lactuca sativa
Manes.04G064400 Manihot esculenta
Mapoly0130s0019 Marchantia polymorpha
MBI19_g04330_MAGBIO Magnolia biondii
MCO04G152 Micromonas commoda
MD05G1054700 Malus domestica
MD10G1062200 Malus domestica
Medtr4g072070 Medicago truncatula
MELO3C002788.2 Cucumis melo
MELO3C028750.2 Cucumis melo
MELO3C035508.2 Cucumis melo
Migut.H02258 Erythranthe guttata
MSTRG.16879 Avicennia marina
Nitab4.5_0005266g0010 Nicotiana tabacum
Nitab4.5_0008276g0050 Nicotiana tabacum
Nn5g29249 Nelumbo nucifera
Oeu060416.1 Olea europaea
Os04g0576800 Oryza sativa ssp. japonica
Os07g0493400 Oryza sativa ssp. japonica
Peaxi162Scf00016g00041 Petunia axillaris
PGR042G3425 Punica granatum
Phvul.011G038300 Phaseolus vulgaris
Potri.004G163600 Populus trichocarpa
Potri.009G125200 Populus trichocarpa
Pp3c2_14820 Physcomitrium patens
PRCOL_00000897 Prasinoderma coloniale
Prupe.8G083500 Prunus persica
Psat7g139560 Pisum sativum
PSO541G5287 Papaver somniferum
PSO675G2881 Papaver somniferum
QL11p046566 Quercus lobata
RcHm_v2.0_Chr6g0268311 Rosa chinensis
RcHm_v2.0_Chr6g0268321 Rosa chinensis
RcHm_v2.0_Chr6g0268341 Rosa chinensis
Rhsim05G0067900 Rhododendron simsii
Sabra04G0109800 Salix brachista
Sabra09G0096200 Salix brachista
SalBow3G0187 Salvia bowleyana
Sc18g0005420 Simmondsia chinensis
Sed0011434 Sechium edule
SEGI_09637 Sequoiadendron giganteum
SEGI_30689 Sequoiadendron giganteum
SGA_v2.0_scaffold2G00942 Striga asiatica
SMO367G0753 Selaginella moellendorffii
Solyc01g110460.4 Solanum lycopersicum
Sopen01g052590 Solanum pennellii
Sp3g29780 Schrenkiella parvula
Sp3g29790 Schrenkiella parvula
Sp3g29800 Schrenkiella parvula
TAR376G0190 Trochodendron aralioides
TAR628G1389 Trochodendron aralioides
THA.LOC104807290 Tarenaya hassleriana
Thecc.01G021700 Theobroma cacao
Thecc.02G073800 Theobroma cacao
Thecc.02G074000 Theobroma cacao
Thecc.10G037600 Theobroma cacao
Thhalv10000231m.g Eutrema salsugineum
Thhalv10022773m.g Eutrema salsugineum
TPR.G28160 Trifolium pratense
TWI38G0305 Tripterygium wilfordii
unitig_32.g11228 Utricularia gibba
vmacro17417 Vaccinium macrocarpon
VMungo1127G2166 Vigna mungo
Zm00001eb073390 Zea mays
Zm00001eb428540 Zea mays

User provided reference genes

Program Settings