Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p33450 Brassica napus
A06p43140 Brassica napus
A08p32170 Brassica napus
A08p32180 Brassica napus
Aa31LG4G16180 Aethionema arabicum
Actinidia12318 Actinidia chinensis
Actinidia28167 Actinidia chinensis
Ah.02g126530 Amaranthus hybridus
Ah.03g139140 Amaranthus hybridus
Ah.03g139150 Amaranthus hybridus
Ah.03g139160 Amaranthus hybridus
AL1G25770 Arabidopsis lyrata
AL5G13190 Arabidopsis lyrata
AT1G13930 Arabidopsis thaliana
AT2G03440 Arabidopsis thaliana
ATR0111G024 Amborella trichopoda
ATR0579G128 Amborella trichopoda
AUR62003131 Chenopodium quinoa
AUR62003132 Chenopodium quinoa
AUR62003133 Chenopodium quinoa
AUR62007951 Chenopodium quinoa
AUR62007952 Chenopodium quinoa
BcaB03g13120 Brassica carinata
BcaB03g13123 Brassica carinata
BcaB07g30301 Brassica carinata
BcaC03g17214 Brassica carinata
BcaC06g31183 Brassica carinata
BcaC06g33998 Brassica carinata
BcaC07g38709 Brassica carinata
BcaC07g38710 Brassica carinata
BolC2t11232H Brassica oleracea
BolC7t43901H Brassica oleracea
BolC8t49263H Brassica oleracea
BolC8t49264H Brassica oleracea
BraA02t08366Z Brassica rapa
BraA06t27202Z Brassica rapa
BraA08t35141Z Brassica rapa
BraA08t35142Z Brassica rapa
C02p51440 Brassica napus
C07p33870 Brassica napus
C08p16390 Brassica napus
C08p16400 Brassica napus
CAN.G1340.8 Capsicum annuum
CANSAT64G1198 Cannabis sativa
CARHR014300 Cardamine hirsuta
CARHR145780 Cardamine hirsuta
Carub.0001s1363 Capsella rubella
Carub.0005s0241 Capsella rubella
Ca_04944_v3 Cicer arietinum L.
Ca_18813_v3 Cicer arietinum L.
Cc11_g12330 Coffea canephora
CDE02G1866 Ceratophyllum demersum
CDE02G2907 Ceratophyllum demersum
CDE02G3795 Ceratophyllum demersum
Cfa008902 Carpinus fangiana
Ciclev10033000m.g Citrus clementina
CiPaw.05G127600 Carya illinoinensis
CiPaw.05G127700 Carya illinoinensis
ClCG05G023860 Citrullus lanatus
COL.COLO4_27925 Corchorus olitorius
COL.COLO4_27926 Corchorus olitorius
Cpa.g.sc1.96 Carica papaya
Cpa.g.sc1.97 Carica papaya
CsaV3_5G033160 Cucumis sativus L.
CSS0028215 Camellia sinensis var. sinensis
CSS0045101 Camellia sinensis var. sinensis
DCAR_027453 Daucus carota
Dinv16707 Davidia involucrata
Duzib251G0287 Durio zibethinus
Duzib251G0928 Durio zibethinus
ECA234G0349 Erigeron canadensis
ECA246G1290 Erigeron canadensis
Eucgr.B03178 Eucalyptus grandis
FAN17G1589 Fragaria x ananassa
FAN22G1555 Fragaria x ananassa
FvH4_4g30460 Fragaria vesca
Glyma.07G226567 Glycine max
Glyma.07G226633 Glycine max
Glyma.20G027200 Glycine max
Gohir.A03G103000 Gossypium hirsutum
Gohir.D02G128200 Gossypium hirsutum
Gorai.005G143900 Gossypium raimondii
HanXRQChr10g0308121 Helianthus annuus
HanXRQChr15g0477051 Helianthus annuus
Haze_11978 Corylus avellana
Hma1.2p1_0354F.1_g133590 Hydrangea macrophylla
HPP92_023625 Vanilla planifolia
HPP92_023639 Vanilla planifolia
Lalb_Chr05g0215091 Lupinus albus
Lalb_Chr17g0341041 Lupinus albus
Lj2g0020869 Lotus japonicus
Lj4g0005239 Lotus japonicus
Lj6P782T102 Lonicera japonica
Lsat_1_v5_gn_3_56161 Lactuca sativa
Lsat_1_v5_gn_4_11980 Lactuca sativa
Manes.01G030000 Manihot esculenta
Manes.01G030100 Manihot esculenta
MBI16_g00500_MAGBIO Magnolia biondii
MD13G1065600 Malus domestica
MD13G1065700 Malus domestica
MD16G1064100 Malus domestica
MD16G1064200 Malus domestica
Medtr4g082830 Medicago truncatula
Medtr4g082860 Medicago truncatula
Medtr5g043660 Medicago truncatula
MELO3C012136.2 Cucumis melo
Migut.E00060 Erythranthe guttata
Migut.L01216 Erythranthe guttata
MSTRG.2322 Avicennia marina
MSTRG.735 Avicennia marina
MSTRG.7763 Avicennia marina
Nitab4.5_0000014g0290 Nicotiana tabacum
Nitab4.5_0000334g0290 Nicotiana tabacum
Nitab4.5_0002806g0050 Nicotiana tabacum
Nitab4.5_0015741g0010 Nicotiana tabacum
Nn4g23335 Nelumbo nucifera
Oeu048150.1 Olea europaea
Os10g0330000 Oryza sativa ssp. japonica
Peaxi162Scf00314g00022 Petunia axillaris
Peaxi162Scf00314g00031 Petunia axillaris
Peaxi162Scf00930g00051 Petunia axillaris
PGR102G0417 Punica granatum
PGR102G3239 Punica granatum
PGSC0003DMG400028384 Solanum tuberosum
PGSC0003DMG400035643 Solanum tuberosum
Phvul.002G168000 Phaseolus vulgaris
Potri.008G093200 Populus trichocarpa
Potri.010G161200 Populus trichocarpa
Prupe.1G282500 Prunus persica
Psat2g127960 Pisum sativum
Psat7g135200 Pisum sativum
Psat7g135240 Pisum sativum
PSO017G6890 Papaver somniferum
PSO478G4998 Papaver somniferum
QL03p070977 Quercus lobata
QL03p070993 Quercus lobata
QL03p071009 Quercus lobata
QL03p071021 Quercus lobata
Rhsim03G0019300 Rhododendron simsii
Rhsim12G0134200 Rhododendron simsii
Sabra08G0070000 Salix brachista
Sabra10G0122600 Salix brachista
Sabra10G0122700 Salix brachista
SalBow2G1698 Salvia bowleyana
SalBow2G1975 Salvia bowleyana
Sc04g0007730 Simmondsia chinensis
Sc04g0007740 Simmondsia chinensis
Sed0005785 Sechium edule
Sed0019389 Sechium edule
SEGI_07999 Sequoiadendron giganteum
SEGI_33923 Sequoiadendron giganteum
SGA_v2.0_scaffold16G07759 Striga asiatica
SGA_v2.0_scaffold287G47154 Striga asiatica
SGA_v2.0_scaffold36G14434 Striga asiatica
Solyc04g005480.1 Solanum lycopersicum
Solyc05g012570.3 Solanum lycopersicum
Sopen04g001500 Solanum pennellii
Sopen05g007400 Solanum pennellii
Sopen05g007410 Solanum pennellii
Sp1g12030 Schrenkiella parvula
Sp2g14360 Schrenkiella parvula
TAR622G0811 Trochodendron aralioides
THA.LOC104805946 Tarenaya hassleriana
Thecc.02G335500 Theobroma cacao
Thecc.02G335600 Theobroma cacao
Thhalv10004968m.g Eutrema salsugineum
Thhalv10008975m.g Eutrema salsugineum
TPR.G2267 Trifolium pratense
TPR.G24450 Trifolium pratense
TPR.G34052 Trifolium pratense
TPR.G34063 Trifolium pratense
TWI75G0276 Tripterygium wilfordii
unitig_699.g19910 Utricularia gibba
vmacro22354 Vaccinium macrocarpon
vmacro22355 Vaccinium macrocarpon
vmacro22356 Vaccinium macrocarpon
vmacro22463 Vaccinium macrocarpon
VMungo0251G2653 Vigna mungo
Zm00001eb007060 Zea mays
Zm00001eb334140 Zea mays

User provided reference genes

Program Settings