Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p19390 Brassica napus
A09p02120 Brassica napus
A09p30470 Brassica napus
A09p54740 Brassica napus
Aa31LG5G2360 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.5133 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1784 Anthoceros agrestis
Actinidia21120 Actinidia chinensis
Actinidia21121 Actinidia chinensis
Actinidia24902 Actinidia chinensis
Ah.02g110950 Amaranthus hybridus
AL6G50290 Arabidopsis lyrata
Aqoxy2G03377 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.ARWK2P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X3NAFX Arachis hypogaea
AT4G02720 Arabidopsis thaliana
ATR0332G007 Amborella trichopoda
ATR0824G270 Amborella trichopoda
Atru.chr5.1462 Acer truncatum
AUR62003538 Chenopodium quinoa
AUR62017852 Chenopodium quinoa
BcaB01g02014 Brassica carinata
BcaC01g01554 Brassica carinata
BcaC01g01557 Brassica carinata
BcaC01g01558 Brassica carinata
BcaC01g01560 Brassica carinata
BcaC01g01561 Brassica carinata
BcaC02g08380 Brassica carinata
BcaC03g13677 Brassica carinata
BcaC03g16168 Brassica carinata
BcaC04g24009 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p02420 Brassica napus
BNapus_Darmor_BZH_scaffold_38p02440 Brassica napus
BNapus_Darmor_BZH_scaffold_38p02460 Brassica napus
BolC2t06954H Brassica oleracea
BolC2t09922H Brassica oleracea
BolC3t21610H Brassica oleracea
BolC3t21613H Brassica oleracea
BolC3t21614H Brassica oleracea
BolC4t27032H Brassica oleracea
BolC8t51344H Brassica oleracea
BolC9t53150H Brassica oleracea
BraA04t17534Z Brassica rapa
BraA09t35861Z Brassica rapa
BraA09t38617Z Brassica rapa
BraA09t40883Z Brassica rapa
BraA09t40884Z Brassica rapa
C02p39120 Brassica napus
C03p93060 Brassica napus
C03p93070 Brassica napus
C03p93080 Brassica napus
C03p93100 Brassica napus
C03p93140 Brassica napus
C03p93150 Brassica napus
C04p54970 Brassica napus
C08p37610 Brassica napus
C09p02210 Brassica napus
C09p02220 Brassica napus
CAN.G439.4 Capsicum annuum
CANSAT01G1819 Cannabis sativa
CARHR251050 Cardamine hirsuta
Carub.0006s3439 Capsella rubella
Ca_05843_v3 Cicer arietinum L.
Ca_09749_v3 Cicer arietinum L.
CBR_g4136 Chara braunii
Cc00_g04130 Coffea canephora
Cc01_g10690 Coffea canephora
CDE06G2067 Ceratophyllum demersum
CDE07G1463 Ceratophyllum demersum
Cfa003508 Carpinus fangiana
Cfa006159 Carpinus fangiana
Ciclev10019827m.g Citrus clementina
CiPaw.08G106300 Carya illinoinensis
ClCG10G016420 Citrullus lanatus
COL.COLO4_09072 Corchorus olitorius
Cpa.g.sc52.49 Carica papaya
Cre01.g032250 Chlamydomonas reinhardtii
CsaV3_3G039920 Cucumis sativus L.
DCAR_000720 Daucus carota
Dinv32920 Davidia involucrata
Duzib177G1090 Durio zibethinus
ECA248G3600 Erigeron canadensis
EL10Ac5g10556 Beta vulgaris
FAN07G0259 Fragaria x ananassa
FAN17G2080 Fragaria x ananassa
FAN22G0082 Fragaria x ananassa
FAN22G0164 Fragaria x ananassa
FAN22G1557 Fragaria x ananassa
FAN22G1718 Fragaria x ananassa
FAN24G1220 Fragaria x ananassa
FAN24G2199 Fragaria x ananassa
FvH4_2g11951 Fragaria vesca
FvH4_4g12190 Fragaria vesca
Glyma.02G146600 Glycine max
Glyma.10G027400 Glycine max
Gohir.A12G004500 Gossypium hirsutum
Gohir.D12G004200 Gossypium hirsutum
Gorai.008G004000 Gossypium raimondii
GSVIVG01001165001 Vitis vinifera
HanXRQChr01g0002971 Helianthus annuus
Haze_04691 Corylus avellana
Haze_16066 Corylus avellana
Haze_27548 Corylus avellana
Hma1.2p1_0667F.1_g199770 Hydrangea macrophylla
Hma1.2p1_0822F.1_g224390 Hydrangea macrophylla
HPP92_009020 Vanilla planifolia
Hund11854 Selenicereus undatus
Lalb_Chr06g0162931 Lupinus albus
Lj1A173G45 Lonicera japonica
Lj1C175T4 Lonicera japonica
Lj2C1116T3 Lonicera japonica
Lj5g0005692 Lotus japonicus
Lsat_1_v5_gn_5_184160 Lactuca sativa
Manes.01G206800 Manihot esculenta
Manes.05G077600 Manihot esculenta
Mapoly0051s0007 Marchantia polymorpha
MBI07_g03188_MAGBIO Magnolia biondii
MCO02G035 Micromonas commoda
MD03G1262900 Malus domestica
MD07G1100600 Malus domestica
MD11G1283600 Malus domestica
Medtr8g028640 Medicago truncatula
MELO3C009735.2 Cucumis melo
Migut.D00312 Erythranthe guttata
MSTRG.21553 Avicennia marina
Nitab4.5_0005156g0010 Nicotiana tabacum
Nitab4.5_0006700g0010 Nicotiana tabacum
Nn1g02285 Nelumbo nucifera
Nn4g26302 Nelumbo nucifera
Oeu028073.1 Olea europaea
Oeu033495.1 Olea europaea
Oeu041715.2 Olea europaea
Os09g0455400 Oryza sativa ssp. japonica
Peaxi162Scf00217g00025 Petunia axillaris
PGR119G0967 Punica granatum
PGSC0003DMG400046756 Solanum tuberosum
Phvul.007G172800 Phaseolus vulgaris
Potri.002G051500 Populus trichocarpa
Potri.005G210900 Populus trichocarpa
Pp3c9_17960 Physcomitrium patens
PRCOL_00001828 Prasinoderma coloniale
Prupe.6G167600 Prunus persica
Prupe.8G239200 Prunus persica
Psat4g156760 Pisum sativum
PSO210G3188 Papaver somniferum
PSO832G2619 Papaver somniferum
QL01p012613 Quercus lobata
QL03p072399 Quercus lobata
RcHm_v2.0_Chr4g0409951 Rosa chinensis
Rhsim01G0273900 Rhododendron simsii
Rhsim07G0046700 Rhododendron simsii
Rhsim10G0030500 Rhododendron simsii
Sabra05G0161100 Salix brachista
SalBow4G2167 Salvia bowleyana
Sc24g0003320 Simmondsia chinensis
Sed0011367 Sechium edule
SEGI_20713 Sequoiadendron giganteum
SGA_v2.0_scaffold138G35328 Striga asiatica
SGA_v2.0_scaffold1G00491 Striga asiatica
SMO231G0049 Selaginella moellendorffii
SMO351G0411 Selaginella moellendorffii
Solyc11g071660.1 Solanum lycopersicum
Sopen11g029330 Solanum pennellii
Sp6g02650 Schrenkiella parvula
TAR369G1095 Trochodendron aralioides
TAR633G0718 Trochodendron aralioides
THA.LOC104801238 Tarenaya hassleriana
THA.LOC104825995 Tarenaya hassleriana
Thecc.01G276600 Theobroma cacao
Thhalv10028691m.g Eutrema salsugineum
TPR.G23082 Trifolium pratense
TPR.G28157 Trifolium pratense
TWI59G1147 Tripterygium wilfordii
unitig_0.g1040 Utricularia gibba
unitig_0.g1042 Utricularia gibba
vmacro18863 Vaccinium macrocarpon
vmacro19512 Vaccinium macrocarpon
vmacro19513 Vaccinium macrocarpon
VMungo0720G2447 Vigna mungo
Zm00001eb314820 Zea mays

User provided reference genes

Program Settings