Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p33800 Brassica napus
Aa31LG2G3530 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2329__2330 Anthoceros agrestis
Actinidia09188 Actinidia chinensis
Actinidia13420 Actinidia chinensis
Actinidia15875 Actinidia chinensis
Actinidia15876 Actinidia chinensis
Actinidia15877 Actinidia chinensis
Actinidia17345 Actinidia chinensis
Actinidia20850 Actinidia chinensis
Actinidia35995 Actinidia chinensis
Actinidia36313 Actinidia chinensis
Ah.10g037590 Amaranthus hybridus
AL2G25520 Arabidopsis lyrata
Aqoxy3G03940 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.395ZIT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4V7WUF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.57NG5G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MNN8Y6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UJVA95 Arachis hypogaea
AT1G67140 Arabidopsis thaliana
ATR0564G046 Amborella trichopoda
ATR0564G289 Amborella trichopoda
Atru.chr8.887 Acer truncatum
AUR62008978 Chenopodium quinoa
AUR62014525 Chenopodium quinoa
BcaB03g15908 Brassica carinata
BolC6t39126H Brassica oleracea
BraA07t31006Z Brassica rapa
C06p43130 Brassica napus
CAN.G625.3 Capsicum annuum
CAN.G625.4 Capsicum annuum
CANSAT64G2814 Cannabis sativa
CARHR059590 Cardamine hirsuta
CARHR059600 Cardamine hirsuta
Carub.0002s1343 Capsella rubella
Ca_03194_v3 Cicer arietinum L.
Ca_04077_v3 Cicer arietinum L.
Ca_04078_v3 Cicer arietinum L.
Ca_07055_v3 Cicer arietinum L.
CBR_g31193 Chara braunii
Cc07_g08900 Coffea canephora
CDE02G0049 Ceratophyllum demersum
CDE02G2490 Ceratophyllum demersum
CDE02G4394 Ceratophyllum demersum
Cfa024622 Carpinus fangiana
Ciclev10010942m.g Citrus clementina
Ciclev10011943m.g Citrus clementina
CiPaw.04G040900 Carya illinoinensis
CiPaw.04G041000 Carya illinoinensis
ClCG11G005420 Citrullus lanatus
ClCG11G005430 Citrullus lanatus
ClCG11G005440 Citrullus lanatus
COL.COLO4_05467 Corchorus olitorius
COL.COLO4_16179 Corchorus olitorius
COL.COLO4_16180 Corchorus olitorius
Cpa.g.c36099 Carica papaya
Cpa.g.sc179.5 Carica papaya
Cpa.g.sc179.6 Carica papaya
Cpa.g.sc179.7 Carica papaya
Cpa.g.sc179.9 Carica papaya
Cpa.g.sc3785.2 Carica papaya
Cre16.g684100 Chlamydomonas reinhardtii
CsaV3_5G039200 Cucumis sativus L.
CSS0006962 Camellia sinensis var. sinensis
CSS0008855 Camellia sinensis var. sinensis
CSS0012709 Camellia sinensis var. sinensis
CSS0018407 Camellia sinensis var. sinensis
CSS0027472 Camellia sinensis var. sinensis
CSS0031203 Camellia sinensis var. sinensis
CSS0032645 Camellia sinensis var. sinensis
CSS0040864 Camellia sinensis var. sinensis
DCAR_017205 Daucus carota
Dinv08429 Davidia involucrata
Dinv33933 Davidia involucrata
Dinv33934 Davidia involucrata
Dinv34837 Davidia involucrata
Duzib133G1200 Durio zibethinus
ECA232G1957 Erigeron canadensis
EL10Ac2g04592 Beta vulgaris
EL10Ac2g04610 Beta vulgaris
EL10Ac8g19727 Beta vulgaris
Eucgr.F02484 Eucalyptus grandis
FAN02G2813 Fragaria x ananassa
FAN09G0938 Fragaria x ananassa
FAN14G4373 Fragaria x ananassa
FvH4_6g45230 Fragaria vesca
Glyma.08G364200 Glycine max
Glyma.18G297900 Glycine max
Gohir.A07G071701 Gossypium hirsutum
Gohir.D07G076100 Gossypium hirsutum
Gorai.001G080300 Gossypium raimondii
Gorai.001G080600 Gossypium raimondii
GSVIVG01031064001 Vitis vinifera
HanXRQChr14g0438731 Helianthus annuus
Haze_14141 Corylus avellana
Hma1.2p1_0136F.1_g062170 Hydrangea macrophylla
Hma1.2p1_0136F.1_g062180 Hydrangea macrophylla
HPP92_003934 Vanilla planifolia
HPP92_003935 Vanilla planifolia
Hund04285 Selenicereus undatus
Hund16134 Selenicereus undatus
Hund16135 Selenicereus undatus
Lalb_Chr21g0317871 Lupinus albus
Lj1g0009000 Lotus japonicus
Lj1g0022983 Lotus japonicus
Lj2C445G6 Lonicera japonica
Lj2C445T15 Lonicera japonica
Lj6g0007936 Lotus japonicus
Lsat_1_v5_gn_1_87981 Lactuca sativa
Lsat_1_v5_gn_3_65920 Lactuca sativa
Lsat_1_v5_gn_4_153641 Lactuca sativa
Lsat_1_v5_gn_4_153700 Lactuca sativa
Lsat_1_v5_gn_4_161940 Lactuca sativa
Lsat_1_v5_gn_4_179241 Lactuca sativa
Lsat_1_v5_gn_5_70501 Lactuca sativa
Lsat_1_v5_gn_7_94541 Lactuca sativa
Lsat_1_v5_gn_8_163720 Lactuca sativa
Lsat_1_v5_gn_8_43240 Lactuca sativa
Manes.02G067500 Manihot esculenta
Manes.07G074028 Manihot esculenta
Mapoly0010s0133 Marchantia polymorpha
Mapoly0101s0033 Marchantia polymorpha
MBI02_g02968_MAGBIO Magnolia biondii
MCO14G535 Micromonas commoda
MD12G1002400 Malus domestica
MD14G1001900 Malus domestica
Medtr7g406950 Medicago truncatula
MELO3C022095.2 Cucumis melo
Migut.H00208 Erythranthe guttata
Nitab4.5_0001569g0050 Nicotiana tabacum
Nitab4.5_0002288g0020 Nicotiana tabacum
Nn4g23790 Nelumbo nucifera
Oeu052985.1 Olea europaea
Os06g0505100 Oryza sativa ssp. japonica
Os06g0505202 Oryza sativa ssp. japonica
Os06g0505302 Oryza sativa ssp. japonica
Peaxi162Scf00814g00242 Petunia axillaris
PGR004G1392 Punica granatum
PGSC0003DMG400012673 Solanum tuberosum
Phvul.008G004700 Phaseolus vulgaris
Potri.004G101250 Populus trichocarpa
Pp3c15_3000 Physcomitrium patens
Pp3c9_4980 Physcomitrium patens
PRCOL_00002157 Prasinoderma coloniale
Prupe.7G002300 Prunus persica
Psat3g206280 Pisum sativum
PSO063G7466 Papaver somniferum
PSO782G1231 Papaver somniferum
QL02p051676 Quercus lobata
QL02p051715 Quercus lobata
RcHm_v2.0_Chr2g0123031 Rosa chinensis
RcHm_v2.0_Chr2g0162941 Rosa chinensis
RcHm_v2.0_Chr2g0163391 Rosa chinensis
RcHm_v2.0_Chr2g0166391 Rosa chinensis
RcHm_v2.0_Chr2g0166401 Rosa chinensis
Rhsim09G0080700 Rhododendron simsii
SalBow3G0178 Salvia bowleyana
Sc23g0006880 Simmondsia chinensis
Sed0012635 Sechium edule
SEGI_31548 Sequoiadendron giganteum
SEGI_32880 Sequoiadendron giganteum
SEGI_40473 Sequoiadendron giganteum
SGA_v2.0_scaffold33G13453 Striga asiatica
SHI17842 Sapria himalayana
SMO239G0031 Selaginella moellendorffii
Solyc02g085810.3 Solanum lycopersicum
Sopen02g030490 Solanum pennellii
Sp5g22090 Schrenkiella parvula
TAR629G0674 Trochodendron aralioides
THA.LOC104805559 Tarenaya hassleriana
Thecc.04G136100 Theobroma cacao
Thhalv10017993m.g Eutrema salsugineum
TPR.G40067 Trifolium pratense
TWI53G0876 Tripterygium wilfordii
unitig_899.g14510 Utricularia gibba
unitig_899.g14511 Utricularia gibba
vmacro05567 Vaccinium macrocarpon
VMungo1383G2489 Vigna mungo
Zm00001eb382690 Zea mays

User provided reference genes

Program Settings