Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p26810 Brassica napus
A07p17930 Brassica napus
Aa31LG5G8390 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3619 Anthoceros agrestis
Actinidia07000 Actinidia chinensis
AL4G20470 Arabidopsis lyrata
AL8G39810 Arabidopsis lyrata
Aqoxy2G00042 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.286ZLS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.66YQP5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.802V4W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CI8U65 Arachis hypogaea
AT2G26990 Arabidopsis thaliana
ATR1096G029 Amborella trichopoda
Atru.chr3.2831 Acer truncatum
AUR62033585 Chenopodium quinoa
AUR62041414 Chenopodium quinoa
BcaB01g03038 Brassica carinata
BcaB02g10062 Brassica carinata
BcaB04g18969 Brassica carinata
BcaC01g03723 Brassica carinata
BcaC01g04918 Brassica carinata
BcaC02g10849 Brassica carinata
BcaC02g10850 Brassica carinata
BolC3t15555H Brassica oleracea
BolC3t17208H Brassica oleracea
BolC4t23951H Brassica oleracea
BraA03t11892Z Brassica rapa
BraA07t29511Z Brassica rapa
C03p32130 Brassica napus
C04p24530 Brassica napus
CAN.G128.106 Capsicum annuum
CAN.G1332.3 Capsicum annuum
CAN.G96.3 Capsicum annuum
CANSAT64G0238 Cannabis sativa
CARHR063930 Cardamine hirsuta
CARHR119240 Cardamine hirsuta
Carub.0004s0747 Capsella rubella
Ca_03426_v3 Cicer arietinum L.
CBR_g24102 Chara braunii
Cc00_g15040 Coffea canephora
Cc00_g24230 Coffea canephora
CDE04G0576 Ceratophyllum demersum
CDE04G2865 Ceratophyllum demersum
CDE07G0877 Ceratophyllum demersum
Cfa024421 Carpinus fangiana
Ciclev10015276m.g Citrus clementina
CiPaw.09G163100 Carya illinoinensis
ClCG02G024160 Citrullus lanatus
COL.COLO4_24925 Corchorus olitorius
Cpa.g.sc84.81 Carica papaya
Cre01.g030800 Chlamydomonas reinhardtii
CsaV3_4G017290 Cucumis sativus L.
CsaV3_4G023170 Cucumis sativus L.
CsaV3_UNG234370 Cucumis sativus L.
CSS0016417 Camellia sinensis var. sinensis
CSS0043612 Camellia sinensis var. sinensis
DCAR_013515 Daucus carota
DCAR_020626 Daucus carota
Dinv12305 Davidia involucrata
Duzib150G0366 Durio zibethinus
Duzib168G0367 Durio zibethinus
ECA236G0656 Erigeron canadensis
EL10Ac1g01678 Beta vulgaris
EL10Ac1g01679 Beta vulgaris
EL10Ac7g16998 Beta vulgaris
Eucgr.B03772 Eucalyptus grandis
FAN07G2602 Fragaria x ananassa
FAN11G0061 Fragaria x ananassa
FAN12G3037 Fragaria x ananassa
FAN12G3698 Fragaria x ananassa
FAN22G0723 Fragaria x ananassa
FAN25G1295 Fragaria x ananassa
FvH4_4g27570 Fragaria vesca
Glyma.03G004400 Glycine max
Glyma.05G079400 Glycine max
Glyma.19G072400 Glycine max
Glyma.19G121500 Glycine max
Gohir.A07G118200 Gossypium hirsutum
Gohir.A09G107400 Gossypium hirsutum
Gohir.D07G122600 Gossypium hirsutum
Gohir.D09G104200 Gossypium hirsutum
Gorai.001G132400 Gossypium raimondii
Gorai.006G121500 Gossypium raimondii
GSVIVG01025835001 Vitis vinifera
HanXRQChr04g0125421 Helianthus annuus
HanXRQChr06g0178281 Helianthus annuus
Haze_20342 Corylus avellana
Haze_20346 Corylus avellana
Haze_26275 Corylus avellana
Hma1.2p1_2801F.1_g328800 Hydrangea macrophylla
HPP92_012450 Vanilla planifolia
Hund04069 Selenicereus undatus
Hund19273 Selenicereus undatus
Lalb_Chr14g0365261 Lupinus albus
Lalb_Chr24g0400701 Lupinus albus
Lj1g0018589 Lotus japonicus
Lj2C938G6 Lonicera japonica
Lsat_1_v5_gn_8_85240 Lactuca sativa
Manes.01G175000 Manihot esculenta
Manes.02G133500 Manihot esculenta
Mapoly0063s0071 Marchantia polymorpha
MBI13_g30274_MAGBIO Magnolia biondii
MBI19_g17996_MAGBIO Magnolia biondii
MCO01G792 Micromonas commoda
MD00G1108200 Malus domestica
MD03G1163800 Malus domestica
MD11G1176300 Malus domestica
Medtr7g087530 Medicago truncatula
MELO3C014699.2 Cucumis melo
Migut.N02389 Erythranthe guttata
MSTRG.21332 Avicennia marina
Nitab4.5_0000062g0380 Nicotiana tabacum
Nitab4.5_0000492g0220 Nicotiana tabacum
Nitab4.5_0000718g0260 Nicotiana tabacum
Nitab4.5_0005212g0010 Nicotiana tabacum
Nitab4.5_0008505g0020 Nicotiana tabacum
Nn7g37169 Nelumbo nucifera
Oeu013457.1 Olea europaea
Oeu027218.1 Olea europaea
Os01g0279200 Oryza sativa ssp. japonica
Peaxi162Scf00032g02619 Petunia axillaris
Peaxi162Scf00791g00019 Petunia axillaris
PGR102G1130 Punica granatum
PGSC0003DMG400022712 Solanum tuberosum
PGSC0003DMG400028109 Solanum tuberosum
PGSC0003DMG400032509 Solanum tuberosum
Phvul.001G102200 Phaseolus vulgaris
Potri.001G222700 Populus trichocarpa
Potri.009G020900 Populus trichocarpa
Pp3c15_2200 Physcomitrium patens
Pp3c17_10150 Physcomitrium patens
Pp3c9_2060 Physcomitrium patens
PRCOL_00002476 Prasinoderma coloniale
Prupe.6G156800 Prunus persica
Psat3g083920 Pisum sativum
Psat7g060600 Pisum sativum
PSO339G6626 Papaver somniferum
PSO384G3915 Papaver somniferum
QL07p015316 Quercus lobata
QL07p015334 Quercus lobata
RcHm_v2.0_Chr4g0435421 Rosa chinensis
RcHm_v2.0_Chr5g0050051 Rosa chinensis
Rhsim13G0197000 Rhododendron simsii
Rhsim13G0201300 Rhododendron simsii
Sabra09G0011400 Salix brachista
Sabra16G0132300 Salix brachista
Sc20g0005970 Simmondsia chinensis
Sed0007264 Sechium edule
Sed0025468 Sechium edule
SEGI_33472 Sequoiadendron giganteum
SEGI_33516 Sequoiadendron giganteum
SEGI_37910 Sequoiadendron giganteum
SGA_v2.0_scaffold26G11383 Striga asiatica
SGA_v2.0_scaffold3G01428 Striga asiatica
SHI24965 Sapria himalayana
SHI24968 Sapria himalayana
SMO117G0130 Selaginella moellendorffii
Solyc01g008840.3 Solanum lycopersicum
Solyc10g081150.3 Solanum lycopersicum
Solyc11g062430.2 Solanum lycopersicum
Sopen01g004350 Solanum pennellii
Sopen10g031650 Solanum pennellii
Sopen11g024630 Solanum pennellii
Sopen11g024640 Solanum pennellii
Sp4g08320 Schrenkiella parvula
TAR623G0430 Trochodendron aralioides
THA.LOC104800481 Tarenaya hassleriana
THA.LOC104826467 Tarenaya hassleriana
Thecc.09G256000 Theobroma cacao
Thhalv10001988m.g Eutrema salsugineum
TPR.G23658 Trifolium pratense
TWI75G1397 Tripterygium wilfordii
TWI79G0192 Tripterygium wilfordii
vmacro04105 Vaccinium macrocarpon
vmacro14282 Vaccinium macrocarpon
VMungo1309G2340 Vigna mungo
VMungo1383G3260 Vigna mungo
Zm00001eb128990 Zea mays
Zm00001eb332660 Zea mays

User provided reference genes

Program Settings