Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p28120 Brassica napus
Aa31LG5G22020 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1882 Anthoceros agrestis
Actinidia12419 Actinidia chinensis
Actinidia12420 Actinidia chinensis
Actinidia26645 Actinidia chinensis
Actinidia26646 Actinidia chinensis
Actinidia26647 Actinidia chinensis
Actinidia28923 Actinidia chinensis
Actinidia28924 Actinidia chinensis
Actinidia28925 Actinidia chinensis
Actinidia28926 Actinidia chinensis
Ah.08g211380 Amaranthus hybridus
AL4G33000 Arabidopsis lyrata
Aqoxy1G01066 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1KP53S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BQYP5G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CVPH5H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G8MIGD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U3B0HF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XM7FE2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z63BRR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z72FSA Arachis hypogaea
AT2G36810 Arabidopsis thaliana
ATR0043G024 Amborella trichopoda
Atru.chr8.1720 Acer truncatum
Atru.chr8.1721 Acer truncatum
Atru.chr8.1722 Acer truncatum
Atru.chr8.1723 Acer truncatum
Atru.chr8.1733 Acer truncatum
AUR62036532 Chenopodium quinoa
AUR62042272 Chenopodium quinoa
BcaC02g07579 Brassica carinata
BolC4t21681H Brassica oleracea
BolC4t28040H Brassica oleracea
BraA04t18297Z Brassica rapa
C04p00360 Brassica napus
C04p65510 Brassica napus
CAN.G1038.13 Capsicum annuum
CANSAT80G2389 Cannabis sativa
CARHR131190 Cardamine hirsuta
Carub.0004s1865 Capsella rubella
Ca_08873_v3 Cicer arietinum L.
Ca_08928_v3 Cicer arietinum L.
Ca_29497_v3 Cicer arietinum L.
Ca_29803_v3 Cicer arietinum L.
Ca_31348_v3 Cicer arietinum L.
CBR_g37399 Chara braunii
CBR_g53950 Chara braunii
Cc06_g04620 Coffea canephora
CDE07G0268 Ceratophyllum demersum
CDE07G0362 Ceratophyllum demersum
Cfa016461 Carpinus fangiana
Ciclev10023867m.g Citrus clementina
Ciclev10024523m.g Citrus clementina
CiPaw.09G003300 Carya illinoinensis
ClCG04G009540 Citrullus lanatus
COL.COLO4_26897 Corchorus olitorius
COL.COLO4_26898 Corchorus olitorius
Cpa.g.sc5.147 Carica papaya
Cpa.g.sc5.149 Carica papaya
Cpa.g.sc5.152 Carica papaya
CsaV3_6G040160 Cucumis sativus L.
CSS0021824 Camellia sinensis var. sinensis
CSS0023266 Camellia sinensis var. sinensis
DCAR_020802 Daucus carota
Dinv35821 Davidia involucrata
Duzib093G0118 Durio zibethinus
Duzib106G1778 Durio zibethinus
ECA233G4297 Erigeron canadensis
EL10Ac7g16718 Beta vulgaris
Eucgr.K02431 Eucalyptus grandis
Eucgr.K02432 Eucalyptus grandis
FAN02G1267 Fragaria x ananassa
FAN05G0072 Fragaria x ananassa
FAN05G4099 Fragaria x ananassa
FAN09G2316 Fragaria x ananassa
FAN14G4083 Fragaria x ananassa
FAN14G4492 Fragaria x ananassa
FvH4_6g17010 Fragaria vesca
Glyma.03G186800 Glycine max
Glyma.19G186900 Glycine max
Gohir.A09G144350 Gossypium hirsutum
Gohir.A09G144400 Gossypium hirsutum
Gohir.A11G323300 Gossypium hirsutum
Gohir.D09G140200 Gossypium hirsutum
Gohir.D11G342350 Gossypium hirsutum
Gohir.D11G342400 Gossypium hirsutum
Gorai.006G160800 Gossypium raimondii
Gorai.007G372400 Gossypium raimondii
GSVIVG01033696001 Vitis vinifera
HanXRQChr13g0400661 Helianthus annuus
Haze_19462 Corylus avellana
Hma1.2p1_0547F.1_g176420 Hydrangea macrophylla
Hma1.2p1_0547F.1_g176430 Hydrangea macrophylla
Hma1.2p1_0547F.1_g176440 Hydrangea macrophylla
HPP92_022597 Vanilla planifolia
Hund20322 Selenicereus undatus
Hund20324 Selenicereus undatus
Lalb_Chr20g0112381 Lupinus albus
Lj1g0002569 Lotus japonicus
Lj3A992G55 Lonicera japonica
Lj3C992G6 Lonicera japonica
Lsat_1_v5_gn_1_74980 Lactuca sativa
Lsat_1_v5_gn_1_85261 Lactuca sativa
Lsat_1_v5_gn_2_2541 Lactuca sativa
Lsat_1_v5_gn_5_120660 Lactuca sativa
Lsat_1_v5_gn_6_28640 Lactuca sativa
Lsat_1_v5_gn_9_14660 Lactuca sativa
Lsat_1_v5_gn_9_56200 Lactuca sativa
Manes.08G013802 Manihot esculenta
Mapoly0008s0039 Marchantia polymorpha
MBI03_g13096_MAGBIO Magnolia biondii
MBI05_g14868_MAGBIO Magnolia biondii
MBI15_g35614_MAGBIO Magnolia biondii
MBI15_g45591_MAGBIO Magnolia biondii
MBI16_g06660_MAGBIO Magnolia biondii
MBI17_g12240_MAGBIO Magnolia biondii
MBI18_g37353_MAGBIO Magnolia biondii
MBI19_g13910_MAGBIO Magnolia biondii
MD12G1104900 Malus domestica
MD12G1105200 Malus domestica
Medtr7g031800 Medicago truncatula
Medtr7g102430 Medicago truncatula
MELO3C024492.2 Cucumis melo
Migut.L01724 Erythranthe guttata
MSTRG.26674 Avicennia marina
Nitab4.5_0002535g0020 Nicotiana tabacum
Nitab4.5_0003314g0020 Nicotiana tabacum
Nn6g35197 Nelumbo nucifera
Oeu045240.1 Olea europaea
Os03g0146600 Oryza sativa ssp. japonica
Peaxi162Scf00435g01013 Petunia axillaris
PGR142G1271 Punica granatum
PGSC0003DMG400011788 Solanum tuberosum
Phvul.001G181800 Phaseolus vulgaris
Phvul.009G007800 Phaseolus vulgaris
Potri.006G120800 Populus trichocarpa
Pp3c22_4780 Physcomitrium patens
Pp3c2_21970 Physcomitrium patens
Prupe.7G124700 Prunus persica
Psat0s1048g0160 Pisum sativum
Psat3g040240 Pisum sativum
Psat3g040280 Pisum sativum
PSO063G4107 Papaver somniferum
PSO339G3623 Papaver somniferum
QL01p037008 Quercus lobata
QL07p041738 Quercus lobata
QL07p042601 Quercus lobata
RcHm_v2.0_Chr3g0471001 Rosa chinensis
Rhsim03G0088500 Rhododendron simsii
Sabra06G0095000 Salix brachista
Sc20g0005740 Simmondsia chinensis
Sed0026042 Sechium edule
SEGI_09433 Sequoiadendron giganteum
SEGI_23674 Sequoiadendron giganteum
SEGI_24462 Sequoiadendron giganteum
SEGI_32647 Sequoiadendron giganteum
SEGI_39450 Sequoiadendron giganteum
SGA_v2.0_scaffold224G42922 Striga asiatica
SMO137G0253 Selaginella moellendorffii
SMO207G0008 Selaginella moellendorffii
Solyc09g008490.4 Solanum lycopersicum
Sopen09g003320 Solanum pennellii
Sp4g19070 Schrenkiella parvula
TAR633G0529 Trochodendron aralioides
THA.LOC104818591 Tarenaya hassleriana
Thecc.05G072900 Theobroma cacao
Thhalv10016131m.g Eutrema salsugineum
TPR.G15450 Trifolium pratense
TPR.G29275 Trifolium pratense
TPR.G32669 Trifolium pratense
TPR.G6 Trifolium pratense
TPR.G7209 Trifolium pratense
TPR.G8693 Trifolium pratense
TWI74G0820 Tripterygium wilfordii
vmacro07325 Vaccinium macrocarpon
vmacro07326 Vaccinium macrocarpon
Zm00001eb003810 Zea mays
Zm00001eb403350 Zea mays

User provided reference genes

Program Settings