Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p36450 Brassica napus
Aa31LG8G300 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3938 Anthoceros agrestis
Actinidia00090 Actinidia chinensis
Actinidia00091 Actinidia chinensis
Actinidia05029 Actinidia chinensis
Ah.04g166460 Amaranthus hybridus
AL1G64090 Arabidopsis lyrata
AL1G64150 Arabidopsis lyrata
AL3G24810 Arabidopsis lyrata
Aqoxy4G02225 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.08QZGW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BBM6FL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C43X3W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UPI3MA Arachis hypogaea
AT1G55930 Arabidopsis thaliana
AT3G13070 Arabidopsis thaliana
ATR0712G125 Amborella trichopoda
Atru.chr2.3629 Acer truncatum
AUR62017064 Chenopodium quinoa
AUR62040651 Chenopodium quinoa
BcaB06g25489 Brassica carinata
BcaC01g04008 Brassica carinata
BcaC05g29213 Brassica carinata
BcaNung05266 Brassica carinata
BolC3t16884H Brassica oleracea
BolC5t34156H Brassica oleracea
BraA03t12955Z Brassica rapa
BraA05t22447Z Brassica rapa
C03p46120 Brassica napus
C05p54850 Brassica napus
CAN.G337.23 Capsicum annuum
CANSAT11G2090 Cannabis sativa
CARHR087650 Cardamine hirsuta
Carub.0001s4454 Capsella rubella
Carub.0003s1241 Capsella rubella
Ca_06377_v3 Cicer arietinum L.
Ca_29420_v3 Cicer arietinum L.
CBR_g22294 Chara braunii
Cc05_g14750 Coffea canephora
Cc05_g14760 Coffea canephora
CDE10G0297 Ceratophyllum demersum
CDE10G0308 Ceratophyllum demersum
Cfa020225 Carpinus fangiana
Ciclev10007688m.g Citrus clementina
CiPaw.11G201400 Carya illinoinensis
CiPaw.12G136300 Carya illinoinensis
ClCG09G021080 Citrullus lanatus
COL.COLO4_02610 Corchorus olitorius
COL.COLO4_09798 Corchorus olitorius
Cpa.g.sc12.186 Carica papaya
CsaV3_7G018550 Cucumis sativus L.
CSS0019206 Camellia sinensis var. sinensis
CSS0039625 Camellia sinensis var. sinensis
DCAR_012909 Daucus carota
DCAR_012924 Daucus carota
DCAR_019235 Daucus carota
Dinv05352 Davidia involucrata
Dinv40838 Davidia involucrata
Duzib170G1101 Durio zibethinus
ECA236G2134 Erigeron canadensis
ECA236G2833 Erigeron canadensis
EL10Ac4g07610 Beta vulgaris
Eucgr.F03700 Eucalyptus grandis
FAN11G3562 Fragaria x ananassa
FAN16G1958 Fragaria x ananassa
FAN21G0517 Fragaria x ananassa
FAN25G0041 Fragaria x ananassa
FAN25G1232 Fragaria x ananassa
FvH4_3g24130 Fragaria vesca
Glyma.02G298200 Glycine max
Glyma.14G015600 Glycine max
Gohir.A01G087800 Gossypium hirsutum
Gohir.A01G093425 Gossypium hirsutum
Gohir.A02G077901 Gossypium hirsutum
Gohir.A11G277200 Gossypium hirsutum
Gohir.A13G134401 Gossypium hirsutum
Gohir.A13G134601 Gossypium hirsutum
Gohir.D01G073900 Gossypium hirsutum
Gohir.D11G287600 Gossypium hirsutum
Gorai.002G097000 Gossypium raimondii
Gorai.007G310900 Gossypium raimondii
Gorai.013G154900 Gossypium raimondii
GSVIVG01037786001 Vitis vinifera
HanXRQChr04g0126521 Helianthus annuus
HanXRQChr11g0326201 Helianthus annuus
HanXRQChr11g0333951 Helianthus annuus
HanXRQChr14g0443231 Helianthus annuus
HanXRQChr16g0526731 Helianthus annuus
Haze_09794 Corylus avellana
Hma1.2p1_0036F.1_g022680 Hydrangea macrophylla
HPP92_024890 Vanilla planifolia
Lalb_Chr04g0247941 Lupinus albus
Lalb_Chr17g0348801 Lupinus albus
Lj1A793T50 Lonicera japonica
Lj6g0012228 Lotus japonicus
Lj6g0018963 Lotus japonicus
Lj8A176T68 Lonicera japonica
LjContig00272g0006391 Lotus japonicus
Lsat_1_v5_gn_4_50341 Lactuca sativa
Lsat_1_v5_gn_7_113161 Lactuca sativa
Lsat_1_v5_gn_7_95440 Lactuca sativa
Manes.03G138400 Manihot esculenta
Mapoly0112s0016 Marchantia polymorpha
MBI16_g26376_MAGBIO Magnolia biondii
MCO02G018 Micromonas commoda
MD03G1188400 Malus domestica
MD11G1204000 Malus domestica
Medtr5g094740 Medicago truncatula
MELO3C024905.2 Cucumis melo
Migut.M01671 Erythranthe guttata
MSTRG.15783 Avicennia marina
MSTRG.6988 Avicennia marina
Nitab4.5_0000461g0120 Nicotiana tabacum
Nitab4.5_0003612g0010 Nicotiana tabacum
Nn1g03233 Nelumbo nucifera
Nn1g07452 Nelumbo nucifera
Oeu019606.1 Olea europaea
Oeu044499.1 Olea europaea
Oeu057086.1 Olea europaea
Os03g0593200 Oryza sativa ssp. japonica
Peaxi162Scf00285g00817 Petunia axillaris
PGR031G3702 Punica granatum
PGSC0003DMG400022184 Solanum tuberosum
Phvul.008G276000 Phaseolus vulgaris
Potri.001G362100 Populus trichocarpa
Pp3c10_7850 Physcomitrium patens
Pp3c1_38160 Physcomitrium patens
Pp3c2_3830 Physcomitrium patens
PRCOL_00003811 Prasinoderma coloniale
Prupe.4G235000 Prunus persica
Psat2g008920 Pisum sativum
PSO210G2219 Papaver somniferum
PSO302G0051 Papaver somniferum
PSO541G6272 Papaver somniferum
PSO675G1367 Papaver somniferum
QL08p005445 Quercus lobata
QL08p006267 Quercus lobata
QL08p006272 Quercus lobata
QL93p0192_0044 Quercus lobata
RcHm_v2.0_Chr1g0355491 Rosa chinensis
RcHm_v2.0_Chr2g0115171 Rosa chinensis
RcHm_v2.0_Chr5g0042791 Rosa chinensis
RcHm_v2.0_Chr5g0042841 Rosa chinensis
RcHm_v2.0_Chr5g0043091 Rosa chinensis
RcHm_v2.0_Chr5g0043101 Rosa chinensis
RcHm_v2.0_Chr5g0043121 Rosa chinensis
RcHm_v2.0_Chr5g0043141 Rosa chinensis
Sabra16G0238600 Salix brachista
SalBow8G1137 Salvia bowleyana
Sc16g0007940 Simmondsia chinensis
Sed0001420 Sechium edule
Sed0024668 Sechium edule
SEGI_11677 Sequoiadendron giganteum
SEGI_18466 Sequoiadendron giganteum
SEGI_20343 Sequoiadendron giganteum
SEGI_39420 Sequoiadendron giganteum
SGA_v2.0_scaffold168G38536 Striga asiatica
SGA_v2.0_scaffold171G38885 Striga asiatica
SGA_v2.0_scaffold304G47939 Striga asiatica
SGA_v2.0_scaffold456G51916 Striga asiatica
SGA_v2.0_scaffold456G51921 Striga asiatica
SMO367G1292 Selaginella moellendorffii
Solyc07g065310.3 Solanum lycopersicum
Sopen07g033510 Solanum pennellii
Sp1g41540 Schrenkiella parvula
Sp3g11240 Schrenkiella parvula
TAR627G0963 Trochodendron aralioides
TAR629G2412 Trochodendron aralioides
THA.LOC104822741 Tarenaya hassleriana
Thecc.07G019500 Theobroma cacao
Thhalv10011303m.g Eutrema salsugineum
Thhalv10020238m.g Eutrema salsugineum
TPR.G14161 Trifolium pratense
TWI38G0150 Tripterygium wilfordii
TWI39G0575 Tripterygium wilfordii
unitig_85.g27343 Utricularia gibba
vmacro11557 Vaccinium macrocarpon
vmacro11558 Vaccinium macrocarpon
VMungo0647G1153 Vigna mungo
Zm00001eb049810 Zea mays

User provided reference genes

Program Settings