Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p06820 Brassica napus
A10p23880 Brassica napus
Aa31LG11G14650 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.156 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1806 Anthoceros agrestis
Actinidia39173 Actinidia chinensis
Ah.04g151120 Amaranthus hybridus
Ah.13g077020 Amaranthus hybridus
AL6G25600 Arabidopsis lyrata
Aqoxy2G00325 Aquilegia oxysepala
Aqoxy2G03781 Aquilegia oxysepala
Aqoxy3G03819 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.C9KHWR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LP5CTB Arachis hypogaea
AT5G14800 Arabidopsis thaliana
ATR0721G010 Amborella trichopoda
Atru.chr1.1452 Acer truncatum
Atru.chr1.1464 Acer truncatum
AUR62030362 Chenopodium quinoa
AUR62040845 Chenopodium quinoa
BcaB01g05096 Brassica carinata
BcaB08g36945 Brassica carinata
BcaC02g08088 Brassica carinata
BcaC02g10122 Brassica carinata
BcaC02g10661 Brassica carinata
BcaC02g11310 Brassica carinata
BcaC02g11392 Brassica carinata
BcaC04g19007 Brassica carinata
BcaC06g33558 Brassica carinata
BcaC07g37429 Brassica carinata
BcaC08g44899 Brassica carinata
BcaNung06051 Brassica carinata
BolC3t13281H Brassica oleracea
BolC3t20511H Brassica oleracea
BolC3t20513H Brassica oleracea
BolC4t23181H Brassica oleracea
BolC4t23262H Brassica oleracea
BolC4t24169H Brassica oleracea
BolC4t24812H Brassica oleracea
BolC6t37672H Brassica oleracea
BolC8t47752H Brassica oleracea
BolC9t59073H Brassica oleracea
BraA03t10007Z Brassica rapa
BraA10t44452Z Brassica rapa
C03p07820 Brassica napus
C03p82400 Brassica napus
C03p82420 Brassica napus
C04p16080 Brassica napus
C04p17110 Brassica napus
C04p26360 Brassica napus
C06p25140 Brassica napus
C08p09060 Brassica napus
C09p62360 Brassica napus
CANSAT64G1401 Cannabis sativa
CARHR198510 Cardamine hirsuta
Carub.0006s1298 Capsella rubella
Ca_08401_v3 Cicer arietinum L.
CBR_g16006 Chara braunii
CBR_g37250 Chara braunii
Cc06_g18620 Coffea canephora
CDE02G3693 Ceratophyllum demersum
CDE09G0749 Ceratophyllum demersum
Cfa016709 Carpinus fangiana
Ciclev10005607m.g Citrus clementina
CiPaw.09G044700 Carya illinoinensis
ClCG04G004210 Citrullus lanatus
COL.COLO4_33945 Corchorus olitorius
Cpa.g.sc49.96 Carica papaya
Cre03.g154550 Chlamydomonas reinhardtii
CsaV3_4G027860 Cucumis sativus L.
CSS0041120 Camellia sinensis var. sinensis
DCAR_020545 Daucus carota
Dinv03868 Davidia involucrata
Dinv08489 Davidia involucrata
Dinv34388 Davidia involucrata
Duzib056G0002 Durio zibethinus
Duzib093G1609 Durio zibethinus
ECA232G1919 Erigeron canadensis
EL10Ac3g07192 Beta vulgaris
Eucgr.K01616 Eucalyptus grandis
Eucgr.K01625 Eucalyptus grandis
FAN02G2058 Fragaria x ananassa
FAN05G1327 Fragaria x ananassa
FAN05G4135 Fragaria x ananassa
FAN06G3481 Fragaria x ananassa
FAN14G1808 Fragaria x ananassa
FvH4_6g25150 Fragaria vesca
FvH4_7g06311 Fragaria vesca
FvH4_7g06312 Fragaria vesca
Glyma.03G129100 Glycine max
Glyma.19G131500 Glycine max
Gohir.A07G024700 Gossypium hirsutum
Gohir.D07G028300 Gossypium hirsutum
Gorai.001G029600 Gossypium raimondii
GSVIVG01033588001 Vitis vinifera
HanXRQChr08g0208641 Helianthus annuus
HanXRQChr09g0266491 Helianthus annuus
Haze_19732 Corylus avellana
Haze_26946 Corylus avellana
Haze_27356 Corylus avellana
HPP92_001015 Vanilla planifolia
Hund24632 Selenicereus undatus
Lalb_Chr14g0365931 Lupinus albus
Lj1A1105T22 Lonicera japonica
Lj1g0026826 Lotus japonicus
Lj2A394G34 Lonicera japonica
Lsat_1_v5_gn_4_129320 Lactuca sativa
Manes.09G008001 Manihot esculenta
Mapoly0029s0092 Marchantia polymorpha
MBI03_g17131_MAGBIO Magnolia biondii
MBI03_g45406_MAGBIO Magnolia biondii
MBI09_g02151_MAGBIO Magnolia biondii
MBI10_g20272_MAGBIO Magnolia biondii
MBI13_g29520_MAGBIO Magnolia biondii
MCO04G012 Micromonas commoda
MCO05G631 Micromonas commoda
MD12G1091600 Malus domestica
MD12G1091800 Malus domestica
MD12G1094100 Malus domestica
MD12G1094200 Malus domestica
MD14G1084400 Malus domestica
Medtr1046s0010 Medicago truncatula
Medtr7g090160 Medicago truncatula
MELO3C019039.2 Cucumis melo
Migut.K00123 Erythranthe guttata
MSTRG.10798 Avicennia marina
MSTRG.15651 Avicennia marina
Nitab4.5_0003379g0050 Nicotiana tabacum
Nitab4.5_0006282g0020 Nicotiana tabacum
Nn1g08168 Nelumbo nucifera
Nn7g36480 Nelumbo nucifera
Oeu029492.1 Olea europaea
Oeu050503.1 Olea europaea
Os01g0948400 Oryza sativa ssp. japonica
Peaxi162Scf00149g00116 Petunia axillaris
PGR042G2932 Punica granatum
PGR142G2709 Punica granatum
PGSC0003DMG400010441 Solanum tuberosum
Phvul.001G124300 Phaseolus vulgaris
Potri.006G042600 Populus trichocarpa
Potri.016G007450 Populus trichocarpa
Pp3c10_15650 Physcomitrium patens
PRCOL_00005946 Prasinoderma coloniale
Prupe.7G045400 Prunus persica
Prupe.7G045500 Prunus persica
Psat3g078000 Pisum sativum
PSO210G1377 Papaver somniferum
PSO782G0909 Papaver somniferum
PSO832G0079 Papaver somniferum
QL07p007726 Quercus lobata
RcHm_v2.0_Chr1g0334171 Rosa chinensis
RcHm_v2.0_Chr2g0125021 Rosa chinensis
RcHm_v2.0_Chr2g0125031 Rosa chinensis
Rhsim03G0034800 Rhododendron simsii
Rhsim13G0081800 Rhododendron simsii
RhsimUnG0217200 Rhododendron simsii
Sabra06G0028900 Salix brachista
Sc13g0001320 Simmondsia chinensis
Sc13g0001340 Simmondsia chinensis
Sed0017232 Sechium edule
Sed0027268 Sechium edule
SEGI_35199 Sequoiadendron giganteum
SEGI_40635 Sequoiadendron giganteum
SGA_v2.0_scaffold44G16671 Striga asiatica
SGA_v2.0_scaffold94G28522 Striga asiatica
SHI05043 Sapria himalayana
SMO337G0103 Selaginella moellendorffii
Solyc02g068640.3 Solanum lycopersicum
Sopen02g017810 Solanum pennellii
Sp6g29240 Schrenkiella parvula
TAR623G0480 Trochodendron aralioides
TAR623G1635 Trochodendron aralioides
THA.LOC104816595 Tarenaya hassleriana
Thecc.05G140900 Theobroma cacao
Thhalv10014353m.g Eutrema salsugineum
TPR.G9312 Trifolium pratense
TWI53G1459 Tripterygium wilfordii
unitig_26.g8850 Utricularia gibba
vmacro07822 Vaccinium macrocarpon
VMungo1383G2371 Vigna mungo
Zm00001eb141220 Zea mays

User provided reference genes

Program Settings