Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p26850 Brassica napus
A07p42340 Brassica napus
A08p05010 Brassica napus
A08p05170 Brassica napus
Aa31LG3G7130 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1832 Anthoceros agrestis
Ah.01g001730 Amaranthus hybridus
Ah.01g002120 Amaranthus hybridus
Ah.01g002650 Amaranthus hybridus
AL1G54750 Arabidopsis lyrata
Aqoxy2G00660 Aquilegia oxysepala
Aqoxy3G00356 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.K6AR5W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S5DLTG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SNS3QW Arachis hypogaea
AT1G48175 Arabidopsis thaliana
ATR0307G033 Amborella trichopoda
Atru.chr12.1654 Acer truncatum
AUR62000790 Chenopodium quinoa
AUR62005177 Chenopodium quinoa
AUR62015080 Chenopodium quinoa
AUR62017542 Chenopodium quinoa
BcaB04g17461 Brassica carinata
BcaB07g33785 Brassica carinata
BcaC06g35194 Brassica carinata
BcaC06g36546 Brassica carinata
BcaC07g37168 Brassica carinata
BcaC08g43013 Brassica carinata
BolC6t35394H Brassica oleracea
BolC7t42388H Brassica oleracea
BolC8t47358H Brassica oleracea
BolC9t57639H Brassica oleracea
BraA05t20080Z Brassica rapa
BraA05t21564Z Brassica rapa
BraA08t32523Z Brassica rapa
BraA08t32534Z Brassica rapa
C06p02680 Brassica napus
C07p18790 Brassica napus
C08p05410 Brassica napus
C09p47960 Brassica napus
CAN.G199.14 Capsicum annuum
CANSAT80G0863 Cannabis sativa
CANSAT80G1489 Cannabis sativa
CARHR037820 Cardamine hirsuta
CARHR289090 Cardamine hirsuta
CARHR290860 Cardamine hirsuta
Carub.0001s3726 Capsella rubella
CBR_g19929 Chara braunii
Cc02_g28280 Coffea canephora
Cc02_g28290 Coffea canephora
Cc02_g28300 Coffea canephora
Cc02_g28310 Coffea canephora
CDE04G0848 Ceratophyllum demersum
Ciclev10009594m.g Citrus clementina
CiPaw.07G197200 Carya illinoinensis
ClCG06G013620 Citrullus lanatus
COL.COLO4_07061 Corchorus olitorius
COL.COLO4_10721 Corchorus olitorius
Cre12.g509600 Chlamydomonas reinhardtii
CsaV3_1G031890 Cucumis sativus L.
CSS0017606 Camellia sinensis var. sinensis
CSS0018468 Camellia sinensis var. sinensis
CSS0020950 Camellia sinensis var. sinensis
CSS0037914 Camellia sinensis var. sinensis
DCAR_018031 Daucus carota
Dinv41177 Davidia involucrata
Duzib170G0568 Durio zibethinus
ECA232G4969 Erigeron canadensis
ECA234G0864 Erigeron canadensis
EL10Ac4g09380 Beta vulgaris
EL10Ac4g09383 Beta vulgaris
EL10Ac4g09389 Beta vulgaris
EL10Ac9g22760 Beta vulgaris
Eucgr.E02102 Eucalyptus grandis
Eucgr.E02142 Eucalyptus grandis
Eucgr.E02147 Eucalyptus grandis
Eucgr.E02155 Eucalyptus grandis
Eucgr.E02171 Eucalyptus grandis
Eucgr.E02175 Eucalyptus grandis
Eucgr.E02201 Eucalyptus grandis
Eucgr.E02232 Eucalyptus grandis
Eucgr.E02240 Eucalyptus grandis
Eucgr.E02248 Eucalyptus grandis
Eucgr.E02291 Eucalyptus grandis
Eucgr.E02296 Eucalyptus grandis
Eucgr.E02304 Eucalyptus grandis
Eucgr.E02530 Eucalyptus grandis
Eucgr.E02551 Eucalyptus grandis
Eucgr.E02600 Eucalyptus grandis
Eucgr.E02911 Eucalyptus grandis
Eucgr.E02915 Eucalyptus grandis
Eucgr.E02942 Eucalyptus grandis
FAN04G3185 Fragaria x ananassa
FAN08G2334 Fragaria x ananassa
FAN17G1929 Fragaria x ananassa
FAN18G2818 Fragaria x ananassa
FAN22G0067 Fragaria x ananassa
FvH4_4g02103 Fragaria vesca
FvH4_4g07280 Fragaria vesca
FvH4_5g15360 Fragaria vesca
Glyma.13G100600 Glycine max
Glyma.17G059300 Glycine max
Gohir.A04G090600 Gossypium hirsutum
Gohir.D04G130600 Gossypium hirsutum
Gorai.012G114300 Gossypium raimondii
GSVIVG01010856001 Vitis vinifera
HanXRQChr16g0514821 Helianthus annuus
Haze_22022 Corylus avellana
Haze_26440 Corylus avellana
Hma1.2p1_1326F.1_g275840 Hydrangea macrophylla
HPP92_008659 Vanilla planifolia
Hund24135 Selenicereus undatus
Lalb_Chr13g0300001 Lupinus albus
Lj4g0009154 Lotus japonicus
Lj5A749G38 Lonicera japonica
Lj5A766G14 Lonicera japonica
Lsat_1_v5_gn_4_41160 Lactuca sativa
Lsat_1_v5_gn_5_115440 Lactuca sativa
Lsat_1_v5_gn_5_90120 Lactuca sativa
Manes.02G069300 Manihot esculenta
Mapoly0047s0093 Marchantia polymorpha
MBI19_g45101_MAGBIO Magnolia biondii
MCO05G158 Micromonas commoda
MD13G1241600 Malus domestica
MD16G1248500 Malus domestica
Medtr7g086830 Medicago truncatula
MELO3C017427.2 Cucumis melo
Migut.L01881 Erythranthe guttata
MSTRG.10440 Avicennia marina
Nitab4.5_0000617g0240 Nicotiana tabacum
Nitab4.5_0000725g0020 Nicotiana tabacum
Nitab4.5_0000725g0040 Nicotiana tabacum
Nitab4.5_0010556g0010 Nicotiana tabacum
Nn3g18876 Nelumbo nucifera
Oeu005620.2 Olea europaea
Oeu008798.1 Olea europaea
Oeu064557.2 Olea europaea
Os03g0321900 Oryza sativa ssp. japonica
Peaxi162Scf01038g00134 Petunia axillaris
PGR001G0004 Punica granatum
PGSC0003DMG400022976 Solanum tuberosum
Phvul.003G141300 Phaseolus vulgaris
Potri.006G075300 Populus trichocarpa
Pp3c14_6040 Physcomitrium patens
PRCOL_00000145 Prasinoderma coloniale
Prupe.1G075100 Prunus persica
Psat3g085920 Pisum sativum
PSO801G0378 Papaver somniferum
PSO832G0096 Papaver somniferum
QL07p021332 Quercus lobata
RcHm_v2.0_Chr4g0399541 Rosa chinensis
RcHm_v2.0_Chr4g0399571 Rosa chinensis
RcHm_v2.0_Chr7g0180711 Rosa chinensis
Rhsim01G0116900 Rhododendron simsii
Sabra06G0056000 Salix brachista
SalBow5G0739 Salvia bowleyana
SalBow5G5556 Salvia bowleyana
Sc20g0003900 Simmondsia chinensis
Sed0004806 Sechium edule
SEGI_25137 Sequoiadendron giganteum
SGA_v2.0_scaffold14G07081 Striga asiatica
SGA_v2.0_scaffold231G43408 Striga asiatica
SMO164G0036 Selaginella moellendorffii
Solyc07g008650.4 Solanum lycopersicum
Sopen07g004580 Solanum pennellii
Sp1g35130 Schrenkiella parvula
Sp7g33250 Schrenkiella parvula
TAR626G0116 Trochodendron aralioides
THA.LOC104800261 Tarenaya hassleriana
Thecc.09G186100 Theobroma cacao
Thhalv10001035m.g Eutrema salsugineum
Thhalv10012316m.g Eutrema salsugineum
TPR.G17987 Trifolium pratense
TPR.G31075 Trifolium pratense
TWI34G0584 Tripterygium wilfordii
TWI63G0052 Tripterygium wilfordii
unitig_8.g4676 Utricularia gibba
vmacro20813 Vaccinium macrocarpon
VMungo1127G0216 Vigna mungo
VMungo1215G0400 Vigna mungo
Zm00001eb054120 Zea mays

User provided reference genes

Program Settings