Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p26030 Brassica napus
A09p38310 Brassica napus
Aa31sc109G20 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3275 Anthoceros agrestis
Actinidia25761 Actinidia chinensis
Actinidia30673 Actinidia chinensis
Actinidia30674 Actinidia chinensis
Actinidia30675 Actinidia chinensis
Actinidia33257 Actinidia chinensis
AL1G41340 Arabidopsis lyrata
Aqoxy3G01454 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.D6D033 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JB8DT0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MTFP9U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZS76EK Arachis hypogaea
AT1G27850 Arabidopsis thaliana
ATR0609G075 Amborella trichopoda
Atru.chr11.2246 Acer truncatum
Atru.chr11.2261 Acer truncatum
AUR62005571 Chenopodium quinoa
AUR62024159 Chenopodium quinoa
BcaC05g26600 Brassica carinata
BcaC05g26601 Brassica carinata
BcaC05g26769 Brassica carinata
BcaC05g26779 Brassica carinata
BcaNung07311 Brassica carinata
BolC3t19710H Brassica oleracea
BolC5t31369H Brassica oleracea
BraA08t34553Z Brassica rapa
BraA09t39341Z Brassica rapa
C03p74620 Brassica napus
C05p26490 Brassica napus
CAN.G692.1 Capsicum annuum
CANSAT01G2001 Cannabis sativa
CARHR027310 Cardamine hirsuta
Carub.0001s2631 Capsella rubella
Ca_16482_v3 Cicer arietinum L.
Cc11_g16600 Coffea canephora
CDE02G1696 Ceratophyllum demersum
CDE04G0036 Ceratophyllum demersum
CDE04G3030 Ceratophyllum demersum
CDE05G3292 Ceratophyllum demersum
CDE07G0717 Ceratophyllum demersum
CDE07G1392 Ceratophyllum demersum
Cfa009315 Carpinus fangiana
Ciclev10030548m.g Citrus clementina
CiPaw.05G115100 Carya illinoinensis
ClCG08G017300 Citrullus lanatus
COL.COLO4_23621 Corchorus olitorius
Cpa.g.c26951.1 Carica papaya
Cpa.g.c26951.2 Carica papaya
Cpa.g.c44110 Carica papaya
CsaV3_2G025330 Cucumis sativus L.
CSS0000134 Camellia sinensis var. sinensis
CSS0021953 Camellia sinensis var. sinensis
CSS0032396 Camellia sinensis var. sinensis
DCAR_007014 Daucus carota
DCAR_013711 Daucus carota
DCAR_024085 Daucus carota
Dinv10992 Davidia involucrata
Dinv14800 Davidia involucrata
Duzib248G1684 Durio zibethinus
Duzib251G0504 Durio zibethinus
Duzib268G1283 Durio zibethinus
ECA233G0646 Erigeron canadensis
ECA234G2423 Erigeron canadensis
EL10Ac6g13438 Beta vulgaris
Eucgr.H04665 Eucalyptus grandis
FAN07G1399 Fragaria x ananassa
FAN07G1859 Fragaria x ananassa
FAN12G3820 Fragaria x ananassa
FAN17G1537 Fragaria x ananassa
FAN22G2024 Fragaria x ananassa
FvH4_4g24320 Fragaria vesca
Glyma.05G145400 Glycine max
Glyma.08G102200 Glycine max
Glyma.11G248200 Glycine max
Glyma.18G009000 Glycine max
Gohir.A03G128600 Gossypium hirsutum
Gohir.D02G152400 Gossypium hirsutum
Gorai.005G171400 Gossypium raimondii
GSVIVG01010345001 Vitis vinifera
HanXRQChr08g0207491 Helianthus annuus
HanXRQChr17g0569161 Helianthus annuus
Hma1.2p1_0167F.1_g073780 Hydrangea macrophylla
Hma1.2p1_1340F.1_g276740 Hydrangea macrophylla
Hma1.2p1_1340F.1_g276750 Hydrangea macrophylla
HPP92_004598 Vanilla planifolia
HPP92_006184 Vanilla planifolia
Hund06065 Selenicereus undatus
Lalb_Chr08g0230701 Lupinus albus
Lalb_Chr11g0075691 Lupinus albus
Lalb_Chr11g0075701 Lupinus albus
Lalb_Chr23g0277961 Lupinus albus
Lj4g0001101 Lotus japonicus
Lj6C822T10 Lonicera japonica
Lj6C822T9 Lonicera japonica
Lsat_1_v5_gn_4_2860 Lactuca sativa
Lsat_1_v5_gn_8_150260 Lactuca sativa
Manes.12G014700 Manihot esculenta
Manes.13G015800 Manihot esculenta
Mapoly0001s0565 Marchantia polymorpha
MBI08_g41743_MAGBIO Magnolia biondii
MD13G1112200 Malus domestica
MD16G1111800 Malus domestica
Medtr2g025250 Medicago truncatula
MELO3C010729.2 Cucumis melo
Migut.E00239 Erythranthe guttata
Migut.K00697 Erythranthe guttata
MSTRG.524 Avicennia marina
MSTRG.7981 Avicennia marina
Nitab4.5_0000240g0070 Nicotiana tabacum
Nitab4.5_0011772g0020 Nicotiana tabacum
Nn3g16538 Nelumbo nucifera
Nn4g22404 Nelumbo nucifera
Oeu003040.1 Olea europaea
Oeu038669.1 Olea europaea
Oeu041685.1 Olea europaea
Oeu056685.2 Olea europaea
Os12g0239000 Oryza sativa ssp. japonica
Os12g0239200 Oryza sativa ssp. japonica
Peaxi162Scf00128g00924 Petunia axillaris
PGR102G1232 Punica granatum
PGSC0003DMG400017461 Solanum tuberosum
Phvul.001G259600 Phaseolus vulgaris
Phvul.002G093600 Phaseolus vulgaris
Phvul.002G176100 Phaseolus vulgaris
Potri.008G178600 Populus trichocarpa
Potri.010G056200 Populus trichocarpa
Pp3c17_22500 Physcomitrium patens
Pp3c17_22550 Physcomitrium patens
Prupe.1G233200 Prunus persica
Psat0s2958g0080 Pisum sativum
Psat3g121600 Pisum sativum
Psat4g118720 Pisum sativum
Psat5g094600 Pisum sativum
Psat5g186360 Pisum sativum
Psat7g035960 Pisum sativum
PSO063G3359 Papaver somniferum
PSO063G5558 Papaver somniferum
PSO782G2541 Papaver somniferum
QL03p054734 Quercus lobata
RcHm_v2.0_Chr4g0431121 Rosa chinensis
Rhsim12G0030500 Rhododendron simsii
Rhsim12G0030600 Rhododendron simsii
Rhsim12G0030700 Rhododendron simsii
Rhsim12G0031400 Rhododendron simsii
Sabra08G0136300 Salix brachista
Sabra10G0048900 Salix brachista
SalBow2G2689 Salvia bowleyana
SalBow8G5205 Salvia bowleyana
Sc11g0000660 Simmondsia chinensis
Sed0027794 Sechium edule
SEGI_06277 Sequoiadendron giganteum
SGA_v2.0_scaffold391G50642 Striga asiatica
SGA_v2.0_scaffold87G27127 Striga asiatica
SHI17938 Sapria himalayana
Solyc05g014640.3 Solanum lycopersicum
Sopen05g009770 Solanum pennellii
Sp1g24060 Schrenkiella parvula
TAR374G0580 Trochodendron aralioides
TAR622G0818 Trochodendron aralioides
TAR629G0808 Trochodendron aralioides
THA.LOC104825519 Tarenaya hassleriana
Thecc.02G274300 Theobroma cacao
Thhalv10006616m.g Eutrema salsugineum
TPR.G22439 Trifolium pratense
TWI18G0501 Tripterygium wilfordii
TWI36G0084 Tripterygium wilfordii
TWI75G0226 Tripterygium wilfordii
unitig_22.g6413 Utricularia gibba
unitig_699.g19949 Utricularia gibba
unitig_699.g19950 Utricularia gibba
unitig_747.g21131 Utricularia gibba
unitig_747.g21132 Utricularia gibba
vmacro01085 Vaccinium macrocarpon
VMungo0251G0774 Vigna mungo
VMungo1383G3029 Vigna mungo
Zm00001eb133500 Zea mays
Zm00001eb133580 Zea mays
Zm00001eb409890 Zea mays

User provided reference genes

Program Settings