Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p55100 Brassica napus
Aa31LG10G17280 Aethionema arabicum
Actinidia19972 Actinidia chinensis
Actinidia21149 Actinidia chinensis
Actinidia24929 Actinidia chinensis
Ah.02g111340 Amaranthus hybridus
Ah.11g050100 Amaranthus hybridus
Ah.11g050110 Amaranthus hybridus
AL5G46290 Arabidopsis lyrata
Aqoxy2G03489 Aquilegia oxysepala
Aqoxy5G00378 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.735JS3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.900HG3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S69P4W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X14VTN Arachis hypogaea
AT3G63430 Arabidopsis thaliana
ATR0665G375 Amborella trichopoda
Atru.chr5.1540 Acer truncatum
AUR62011961 Chenopodium quinoa
AUR62032274 Chenopodium quinoa
AUR62041345 Chenopodium quinoa
BcaC07g40810 Brassica carinata
BcaC07g42691 Brassica carinata
BolC8t51378H Brassica oleracea
BraA09t40917Z Brassica rapa
C08p38040 Brassica napus
CANSAT25G1147 Cannabis sativa
CARHR291540 Cardamine hirsuta
Carub.0005s3005 Capsella rubella
Ca_08637_v3 Cicer arietinum L.
Ca_09721_v3 Cicer arietinum L.
Cc00_g27210 Coffea canephora
CDE06G2016 Ceratophyllum demersum
CDE07G1346 Ceratophyllum demersum
Cfa006213 Carpinus fangiana
Ciclev10018911m.g Citrus clementina
CiPaw.07G086100 Carya illinoinensis
ClCG07G000540 Citrullus lanatus
COL.COLO4_06099 Corchorus olitorius
Cpa.g.c31397 Carica papaya
CsaV3_2G013800 Cucumis sativus L.
CSS0001059 Camellia sinensis var. sinensis
CSS0002956 Camellia sinensis var. sinensis
CSS0004377 Camellia sinensis var. sinensis
CSS0007174 Camellia sinensis var. sinensis
CSS0009045 Camellia sinensis var. sinensis
CSS0010046 Camellia sinensis var. sinensis
CSS0011133 Camellia sinensis var. sinensis
CSS0017033 Camellia sinensis var. sinensis
CSS0018040 Camellia sinensis var. sinensis
CSS0021062 Camellia sinensis var. sinensis
CSS0029515 Camellia sinensis var. sinensis
CSS0035692 Camellia sinensis var. sinensis
CSS0036794 Camellia sinensis var. sinensis
CSS0039890 Camellia sinensis var. sinensis
CSS0045357 Camellia sinensis var. sinensis
CSS0048058 Camellia sinensis var. sinensis
DCAR_002692 Daucus carota
DCAR_005854 Daucus carota
DCAR_012508 Daucus carota
Dinv22492 Davidia involucrata
Dinv34555 Davidia involucrata
Duzib133G0640 Durio zibethinus
Duzib138G1561 Durio zibethinus
Duzib211G0278 Durio zibethinus
ECA247G1386 Erigeron canadensis
ECA248G3364 Erigeron canadensis
EL10Ac5g10483 Beta vulgaris
Eucgr.B01477 Eucalyptus grandis
FAN15G1200 Fragaria x ananassa
FAN20G2722 Fragaria x ananassa
FAN24G2611 Fragaria x ananassa
FAN27G1464 Fragaria x ananassa
FvH4_2g22810 Fragaria vesca
Glyma.02G143400 Glycine max
Glyma.10G031000 Glycine max
Gohir.A05G392150 Gossypium hirsutum
Gohir.A07G207900 Gossypium hirsutum
Gohir.A08G062500 Gossypium hirsutum
Gohir.A11G126200 Gossypium hirsutum
Gohir.D04G024950 Gossypium hirsutum
Gohir.D07G213901 Gossypium hirsutum
Gohir.D08G071700 Gossypium hirsutum
Gohir.D11G131801 Gossypium hirsutum
Gorai.001G241900 Gossypium raimondii
Gorai.004G075700 Gossypium raimondii
Gorai.007G140900 Gossypium raimondii
Gorai.012G027500 Gossypium raimondii
GSVIVG01003137001 Vitis vinifera
HanXRQChr01g0006931 Helianthus annuus
HanXRQChr06g0177881 Helianthus annuus
HanXRQChr10g0282171 Helianthus annuus
HanXRQChr15g0466901 Helianthus annuus
Haze_04629 Corylus avellana
Hma1.2p1_0210F.1_g089550 Hydrangea macrophylla
HPP92_020343 Vanilla planifolia
HPP92_024347 Vanilla planifolia
Hund02868 Selenicereus undatus
Lalb_Chr01g0019961 Lupinus albus
Lalb_Chr06g0162731 Lupinus albus
Lj1A56T63 Lonicera japonica
Lj1g0025199 Lotus japonicus
Lj5g0023922 Lotus japonicus
Lsat_1_v5_gn_5_184780 Lactuca sativa
Lsat_1_v5_gn_9_7940 Lactuca sativa
Manes.01G203100 Manihot esculenta
Manes.05G082700 Manihot esculenta
MBI04_g36520_MAGBIO Magnolia biondii
MD03G1256300 Malus domestica
MD11G1277100 Malus domestica
Medtr1g041880 Medicago truncatula
Medtr1g071070 Medicago truncatula
Medtr7g095890 Medicago truncatula
MELO3C014319.2 Cucumis melo
Migut.D00347 Erythranthe guttata
Migut.N02178 Erythranthe guttata
MSTRG.12545 Avicennia marina
MSTRG.17468 Avicennia marina
MSTRG.18275 Avicennia marina
MSTRG.21519 Avicennia marina
Nitab4.5_0000617g0200 Nicotiana tabacum
Nitab4.5_0010556g0020 Nicotiana tabacum
Nn1g00777 Nelumbo nucifera
Nn1g02509 Nelumbo nucifera
Nn1g04680 Nelumbo nucifera
Nn1g04862 Nelumbo nucifera
Nn1g04863 Nelumbo nucifera
Nn1g04864 Nelumbo nucifera
Nn2g11247 Nelumbo nucifera
Nn3g19462 Nelumbo nucifera
Nn3g21249 Nelumbo nucifera
Nn5g28224 Nelumbo nucifera
Oeu002272.1 Olea europaea
Oeu011513.1 Olea europaea
Oeu058798.1 Olea europaea
Os11g0587300 Oryza sativa ssp. japonica
Peaxi162Scf01038g00148 Petunia axillaris
PGR119G2143 Punica granatum
PGSC0003DMG400022986 Solanum tuberosum
Phvul.007G175800 Phaseolus vulgaris
Potri.002G046700 Populus trichocarpa
Potri.005G216300 Populus trichocarpa
Prupe.8G233400 Prunus persica
Psat3g061520 Pisum sativum
Psat6g058320 Pisum sativum
PSO210G6408 Papaver somniferum
PSO832G0360 Papaver somniferum
QL02p069683 Quercus lobata
QL12p042499 Quercus lobata
RcHm_v2.0_Chr6g0289731 Rosa chinensis
Rhsim01G0271400 Rhododendron simsii
Rhsim13G0030000 Rhododendron simsii
Sabra02G0037600 Salix brachista
Sabra05G0165800 Salix brachista
SalBow4G1883 Salvia bowleyana
SalBow4G1898 Salvia bowleyana
SalBow6G3195 Salvia bowleyana
Sc05g0001120 Simmondsia chinensis
Sed0018560 Sechium edule
SEGI_20817 Sequoiadendron giganteum
SGA_v2.0_scaffold214G42261 Striga asiatica
SGA_v2.0_scaffold502G52516 Striga asiatica
SGA_v2.0_scaffold76G25113 Striga asiatica
SGA_v2.0_scaffold81G26054 Striga asiatica
SHI10022 Sapria himalayana
Solyc07g008670.3 Solanum lycopersicum
Sopen07g004600 Solanum pennellii
Sp5g00120 Schrenkiella parvula
TAR362G1025 Trochodendron aralioides
TAR633G0743 Trochodendron aralioides
TAR633G1445 Trochodendron aralioides
THA.LOC104817570 Tarenaya hassleriana
Thecc.01G269500 Theobroma cacao
Thhalv10005863m.g Eutrema salsugineum
TPR.G19092 Trifolium pratense
TPR.G39068 Trifolium pratense
TPR.G39105 Trifolium pratense
vmacro02620 Vaccinium macrocarpon
vmacro14883 Vaccinium macrocarpon
VMungo0720G1763 Vigna mungo
Zm00001eb200650 Zea mays

User provided reference genes

Program Settings