Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p13020 Brassica napus
Aa31LG8G12520 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1195 Anthoceros agrestis
Actinidia28031 Actinidia chinensis
Ah.01g023970 Amaranthus hybridus
Ah.03g139970 Amaranthus hybridus
AL3G45800 Arabidopsis lyrata
Aqoxy6G00874 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8F9AHD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8NDV1J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AL483W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JLXM4S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QQ8XF2 Arachis hypogaea
AT2G14110 Arabidopsis thaliana
ATR0767G074 Amborella trichopoda
ATR0767G082 Amborella trichopoda
Atru.chr3.1247 Acer truncatum
Atru.chr6.1261 Acer truncatum
Atru.chr6.1269 Acer truncatum
AUR62003663 Chenopodium quinoa
AUR62012887 Chenopodium quinoa
AUR62017972 Chenopodium quinoa
AUR62027111 Chenopodium quinoa
BcaB02g11486 Brassica carinata
BcaC04g22775 Brassica carinata
BolC9t54449H Brassica oleracea
BraA09t36947Z Brassica rapa
C09p15420 Brassica napus
CAN.G997.2 Capsicum annuum
CANSAT01G0714 Cannabis sativa
CANSAT54G1150 Cannabis sativa
CARHR104200 Cardamine hirsuta
Carub.0003s2836 Capsella rubella
Ca_00163_v3 Cicer arietinum L.
CBR_g26273 Chara braunii
Cc02_g20920 Coffea canephora
Cc07_g14100 Coffea canephora
CDE04G3107 Ceratophyllum demersum
Cfa005734 Carpinus fangiana
Cfa006882 Carpinus fangiana
Ciclev10026755m.g Citrus clementina
Ciclev10029337m.g Citrus clementina
CiPaw.05G029600 Carya illinoinensis
CiPaw.07G047500 Carya illinoinensis
ClCG09G016080 Citrullus lanatus
COL.COLO4_32389 Corchorus olitorius
Cpa.g.sc20.1 Carica papaya
Cpa.g.sc55.25 Carica papaya
Cre09.g401738 Chlamydomonas reinhardtii
CsaV3_7G006880 Cucumis sativus L.
CSS0016886 Camellia sinensis var. sinensis
CSS0036052 Camellia sinensis var. sinensis
CSS0050337 Camellia sinensis var. sinensis
DCAR_003601 Daucus carota
Dinv13602 Davidia involucrata
Dinv24149 Davidia involucrata
Dinv36604 Davidia involucrata
Duzib052G0856 Durio zibethinus
Duzib147G0892 Durio zibethinus
ECA236G1467 Erigeron canadensis
EL10Ac9g22073 Beta vulgaris
Eucgr.G00988 Eucalyptus grandis
FAN15G0689 Fragaria x ananassa
FAN19G1458 Fragaria x ananassa
FAN23G0964 Fragaria x ananassa
FAN24G2578 Fragaria x ananassa
FAN26G3235 Fragaria x ananassa
FAN28G0881 Fragaria x ananassa
FvH4_1g19640 Fragaria vesca
FvH4_2g11710 Fragaria vesca
Glyma.07G181900 Glycine max
Glyma.08G067900 Glycine max
Glyma.13G256700 Glycine max
Glyma.15G058200 Glycine max
Gohir.A13G050900 Gossypium hirsutum
Gohir.D12G017100 Gossypium hirsutum
Gohir.D13G049650 Gossypium hirsutum
Gorai.008G017400 Gossypium raimondii
Gorai.013G055500 Gossypium raimondii
GSVIVG01015646001 Vitis vinifera
GSVIVG01015647001 Vitis vinifera
GSVIVG01015652001 Vitis vinifera
HanXRQChr08g0227191 Helianthus annuus
Haze_03870 Corylus avellana
Haze_10523 Corylus avellana
Hma1.2p1_0908F.1_g235485 Hydrangea macrophylla
Hma1.2p1_1058F.1_g252870 Hydrangea macrophylla
HPP92_016899 Vanilla planifolia
Hund00378 Selenicereus undatus
Hund16529 Selenicereus undatus
Lalb_Chr05g0216361 Lupinus albus
Lalb_Chr16g0382941 Lupinus albus
Lalb_Chr18g0060401 Lupinus albus
Lj4g0024713 Lotus japonicus
Lj5A230G39 Lonicera japonica
Lj5A230G40 Lonicera japonica
Lj6g0003535 Lotus japonicus
Lsat_1_v5_gn_7_82781 Lactuca sativa
Manes.07G038200 Manihot esculenta
Manes.10G098600 Manihot esculenta
Manes.12G126200 Manihot esculenta
Mapoly0010s0051 Marchantia polymorpha
Mapoly0032s0046 Marchantia polymorpha
Mapoly0042s0017 Marchantia polymorpha
Mapoly0042s0019 Marchantia polymorpha
MBI16_g12461_MAGBIO Magnolia biondii
MCO09G863 Micromonas commoda
MCO11G520 Micromonas commoda
MCO16G283 Micromonas commoda
MD01G1039300 Malus domestica
MD05G1047400 Malus domestica
MD10G1054300 Malus domestica
Medtr2g009600 Medicago truncatula
Medtr4g093560 Medicago truncatula
MELO3C018606.2 Cucumis melo
Migut.B00552 Erythranthe guttata
Migut.N01096 Erythranthe guttata
MSTRG.20281 Avicennia marina
MSTRG.27816 Avicennia marina
Nitab4.5_0002017g0010 Nicotiana tabacum
Nitab4.5_0002095g0060 Nicotiana tabacum
Nitab4.5_0008998g0010 Nicotiana tabacum
Nitab4.5_0011038g0020 Nicotiana tabacum
Nn1g05569 Nelumbo nucifera
Nn5g29884 Nelumbo nucifera
Oeu042406.1 Olea europaea
Os03g0737300 Oryza sativa ssp. japonica
Os03g0737400 Oryza sativa ssp. japonica
Os11g0434000 Oryza sativa ssp. japonica
Peaxi162Scf00003g03230 Petunia axillaris
Peaxi162Scf00299g00634 Petunia axillaris
PGR042G0672 Punica granatum
PGR102G1409 Punica granatum
PGSC0003DMG400031403 Solanum tuberosum
PGSC0003DMG400033580 Solanum tuberosum
Phvul.002G212900 Phaseolus vulgaris
Phvul.006G202000 Phaseolus vulgaris
Potri.017G043700 Populus trichocarpa
Potri.017G043900 Populus trichocarpa
Pp3c1_28610 Physcomitrium patens
PRCOL_00003087 Prasinoderma coloniale
Prupe.6G201600 Prunus persica
Prupe.8G069800 Prunus persica
Psat1g214120 Pisum sativum
Psat7g101120 Pisum sativum
PSO541G0595 Papaver somniferum
QL11p025207 Quercus lobata
RcHm_v2.0_Chr2g0111211 Rosa chinensis
RcHm_v2.0_Chr6g0271011 Rosa chinensis
Rhsim05G0101900 Rhododendron simsii
RhsimUnG0154900 Rhododendron simsii
Sabra17G0029800 Salix brachista
SalBow6G1284 Salvia bowleyana
SalBow8G4107 Salvia bowleyana
Sc18g0007060 Simmondsia chinensis
Sed0006788 Sechium edule
Sed0018824 Sechium edule
SEGI_37389 Sequoiadendron giganteum
SGA_v2.0_scaffold83G26375 Striga asiatica
SMO271G0099 Selaginella moellendorffii
Solyc01g105970.3 Solanum lycopersicum
Solyc10g047310.1 Solanum lycopersicum
Sopen01g048350 Solanum pennellii
Sp3g27460 Schrenkiella parvula
TAR376G0575 Trochodendron aralioides
TAR628G1674 Trochodendron aralioides
THA.LOC104807183 Tarenaya hassleriana
THA.LOC104824951 Tarenaya hassleriana
Thecc.01G090400 Theobroma cacao
Thecc.02G129300 Theobroma cacao
Thhalv10022868m.g Eutrema salsugineum
TPR.G2887 Trifolium pratense
TPR.G9500 Trifolium pratense
TWI14G0912 Tripterygium wilfordii
TWI59G0852 Tripterygium wilfordii
unitig_37.g12793 Utricularia gibba
unitig_46.g18833 Utricularia gibba
vmacro19957 Vaccinium macrocarpon
VMungo0251G2759 Vigna mungo
VMungo0540G1729 Vigna mungo
Zm00001eb215290 Zea mays

User provided reference genes

Program Settings