Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p32560 Brassica napus
A06p10680 Brassica napus
A09p61980 Brassica napus
Aa31LG1G450 Aethionema arabicum
Aa31LG2G7930 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.628 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2281 Anthoceros agrestis
Actinidia37486 Actinidia chinensis
Ah.03g147270 Amaranthus hybridus
AL1G26600 Arabidopsis lyrata
AL5G11180 Arabidopsis lyrata
Aqoxy3G04044 Aquilegia oxysepala
Aqoxy3G04050_Aqoxy3G04051 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5QEX77 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.74LDE2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CL5R4G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ES5X1M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RN5M7S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YNYX6A Arachis hypogaea
AT1G14630 Arabidopsis thaliana
AT2G01990 Arabidopsis thaliana
Atru.chr11.978 Acer truncatum
AUR62003488 Chenopodium quinoa
AUR62017797 Chenopodium quinoa
BcaB02g06532 Brassica carinata
BcaB07g30363 Brassica carinata
BcaC03g17106 Brassica carinata
BcaC05g25378 Brassica carinata
BcaC07g41555 Brassica carinata
BolC2t11091H Brassica oleracea
BolC5t30003H Brassica oleracea
BolC8t52109H Brassica oleracea
BraA02t08274Z Brassica rapa
BraA06t24248Z Brassica rapa
BraA06t24250Z Brassica rapa
C02p50130 Brassica napus
C05p12590 Brassica napus
C08p45560 Brassica napus
CAN.G282.91 Capsicum annuum
CANSAT78G0176 Cannabis sativa
CARHR015130 Cardamine hirsuta
CARHR144590 Cardamine hirsuta
Carub.0001s1439 Capsella rubella
Carub.0005s0100 Capsella rubella
Ca_17075_v3 Cicer arietinum L.
Ca_18200_v3 Cicer arietinum L.
Cc11_g05230 Coffea canephora
CDE07G0997 Ceratophyllum demersum
Cfa021194 Carpinus fangiana
Ciclev10016179m.g Citrus clementina
CiPaw.05G160300 Carya illinoinensis
ClCG01G006870 Citrullus lanatus
COL.COLO4_27553 Corchorus olitorius
Cpa.g.c30279.1 Carica papaya
Cpa.g.c30279.2 Carica papaya
CsaV3_5G017270 Cucumis sativus L.
CSS0003003 Camellia sinensis var. sinensis
DCAR_002640 Daucus carota
DCAR_026837 Daucus carota
DCAR_030320 Daucus carota
Dinv01909 Davidia involucrata
Dinv07026 Davidia involucrata
Duzib248G0765 Durio zibethinus
Duzib251G0867 Durio zibethinus
ECA234G1081 Erigeron canadensis
EL10Ac6g15384 Beta vulgaris
Eucgr.B02634 Eucalyptus grandis
FAN07G0800 Fragaria x ananassa
FAN12G4100 Fragaria x ananassa
FAN17G0989 Fragaria x ananassa
FAN22G0848 Fragaria x ananassa
FvH4_4g35920 Fragaria vesca
Glyma.02G241700 Glycine max
Glyma.05G136600 Glycine max
Glyma.08G091800 Glycine max
Glyma.11G213200 Glycine max
Glyma.14G211400 Glycine max
Gohir.A01G144600 Gossypium hirsutum
Gohir.A04G143300 Gossypium hirsutum
Gohir.D01G135900 Gossypium hirsutum
Gohir.D04G186600 Gossypium hirsutum
Gorai.002G170200 Gossypium raimondii
Gorai.012G183000 Gossypium raimondii
GSVIVG01011569001 Vitis vinifera
GSVIVG01035252001 Vitis vinifera
HanXRQChr16g0527671 Helianthus annuus
HanXRQChr17g0566501 Helianthus annuus
Haze_10751 Corylus avellana
Hma1.2p1_0068F.1_g037290 Hydrangea macrophylla
HPP92_016178 Vanilla planifolia
HPP92_016179 Vanilla planifolia
HPP92_026737 Vanilla planifolia
Hund04323 Selenicereus undatus
Lalb_Chr07g0188021 Lupinus albus
Lalb_Chr12g0209261 Lupinus albus
Lalb_Chr13g0293021 Lupinus albus
Lj3A858T45 Lonicera japonica
Lj4g0002501 Lotus japonicus
Lj6g0001325 Lotus japonicus
Lj6P728T10 Lonicera japonica
Lsat_1_v5_gn_4_22080 Lactuca sativa
Lsat_1_v5_gn_5_35201 Lactuca sativa
Manes.15G140200 Manihot esculenta
Manes.17G091300 Manihot esculenta
Mapoly0006s0267 Marchantia polymorpha
MBI13_g40625_MAGBIO Magnolia biondii
MBI13_g47388_MAGBIO Magnolia biondii
MBI19_g02927_MAGBIO Magnolia biondii
MD13G1013900 Malus domestica
MD16G1011100 Malus domestica
Medtr3g064750 Medicago truncatula
MELO3C005226.2 Cucumis melo
Migut.E00571 Erythranthe guttata
MSTRG.13651 Avicennia marina
MSTRG.2100 Avicennia marina
Nitab4.5_0001529g0010 Nicotiana tabacum
Nitab4.5_0003241g0040 Nicotiana tabacum
Nn3g18495 Nelumbo nucifera
Nn4g24596 Nelumbo nucifera
Nn4g24636 Nelumbo nucifera
Oeu024856.1 Olea europaea
Oeu044066.1 Olea europaea
Os09g0448500 Oryza sativa ssp. japonica
Peaxi162Scf00349g00216 Petunia axillaris
PGR142G4244 Punica granatum
Phvul.001G227400 Phaseolus vulgaris
Phvul.002G185400 Phaseolus vulgaris
Phvul.008G239400 Phaseolus vulgaris
Potri.008G140900 Populus trichocarpa
Potri.010G100700 Populus trichocarpa
Pp3c20_12300 Physcomitrium patens
Pp3c23_10500 Physcomitrium patens
Pp3c23_1740 Physcomitrium patens
Pp3c24_7020 Physcomitrium patens
Prupe.1G339600 Prunus persica
Psat5g142120 Pisum sativum
Psat7g085960 Pisum sativum
PSO063G7219 Papaver somniferum
PSO782G3794 Papaver somniferum
QL03p040635 Quercus lobata
RcHm_v2.0_Chr4g0445521 Rosa chinensis
Rhsim09G0082700 Rhododendron simsii
Sabra08G0106900 Salix brachista
Sabra10G0073200 Salix brachista
SalBow2G0473 Salvia bowleyana
SalBow2G0509 Salvia bowleyana
Sc23g0005370 Simmondsia chinensis
Sed0010422 Sechium edule
Sed0021361 Sechium edule
SEGI_11099 Sequoiadendron giganteum
SEGI_18764 Sequoiadendron giganteum
SEGI_19876 Sequoiadendron giganteum
SEGI_20431 Sequoiadendron giganteum
SEGI_27861 Sequoiadendron giganteum
SGA_v2.0_scaffold348G49583 Striga asiatica
Solyc01g005010.4 Solanum lycopersicum
Sopen01g001100 Solanum pennellii
Sp1g12990 Schrenkiella parvula
Sp2g13420 Schrenkiella parvula
TAR374G0003 Trochodendron aralioides
TAR374G0520 Trochodendron aralioides
TAR622G0215 Trochodendron aralioides
TAR687G0001 Trochodendron aralioides
THA.LOC104805107 Tarenaya hassleriana
THA.LOC104824112 Tarenaya hassleriana
Thecc.02G300900 Theobroma cacao
Thhalv10004908m.g Eutrema salsugineum
Thhalv10008716m.g Eutrema salsugineum
TPR.G11955 Trifolium pratense
TPR.G26698 Trifolium pratense
TWI53G0580 Tripterygium wilfordii
TWI74G0156 Tripterygium wilfordii
vmacro10757 Vaccinium macrocarpon
VMungo0251G2986 Vigna mungo
VMungo0647G0269 Vigna mungo
VMungo1383G1870 Vigna mungo
Zm00001eb037710 Zea mays
Zm00001eb100680 Zea mays
Zm00001eb193320 Zea mays
Zm00001eb256450 Zea mays
Zm00001eb314530 Zea mays

User provided reference genes

Program Settings