Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p35330 Brassica napus
A05p40650 Brassica napus
Aa31LG5G18100 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.3329 Anthoceros agrestis
Actinidia11655 Actinidia chinensis
Actinidia23132 Actinidia chinensis
Actinidia34522 Actinidia chinensis
Ah.07g202460 Amaranthus hybridus
AL3G18900 Arabidopsis lyrata
Aqoxy2G04159 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0NAL6S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1KAH27 Arachis hypogaea
AT3G07560 Arabidopsis thaliana
ATR0737G020 Amborella trichopoda
ATR0752G090 Amborella trichopoda
Atru.chr4.1339 Acer truncatum
Atru.chr6.3488 Acer truncatum
AUR62002363 Chenopodium quinoa
AUR62023822 Chenopodium quinoa
BcaB03g14694 Brassica carinata
BcaB04g21287 Brassica carinata
BcaC01g04277 Brassica carinata
BcaC05g29550 Brassica carinata
BolC1t05546H Brassica oleracea
BolC3t16562H Brassica oleracea
BolC5t34630H Brassica oleracea
BraA01t04376Z Brassica rapa
BraA05t22796Z Brassica rapa
C03p42940 Brassica napus
C05p59760 Brassica napus
CAN.G181.49 Capsicum annuum
CANSAT11G1915 Cannabis sativa
CANSAT56G4141 Cannabis sativa
CARHR082220 Cardamine hirsuta
CARHR082240 Cardamine hirsuta
Carub.0003s0711 Capsella rubella
Ca_01239_v3 Cicer arietinum L.
CBR_g38951 Chara braunii
CBR_g50337 Chara braunii
Cc02_g30690 Coffea canephora
CDE02G4798 Ceratophyllum demersum
CDE05G3137 Ceratophyllum demersum
Cfa015215 Carpinus fangiana
Ciclev10016105m.g Citrus clementina
Ciclev10021425m.g Citrus clementina
CiPaw.01G173700 Carya illinoinensis
CiPaw.02G103400 Carya illinoinensis
ClCG07G011660 Citrullus lanatus
COL.COLO4_29926 Corchorus olitorius
Cpa.g.sc8.23 Carica papaya
Cre13.g574700 Chlamydomonas reinhardtii
CsaV3_4G002560 Cucumis sativus L.
CSS0006211 Camellia sinensis var. sinensis
CSS0026869 Camellia sinensis var. sinensis
CSS0030404 Camellia sinensis var. sinensis
Dinv28779 Davidia involucrata
Duzib133G0954 Durio zibethinus
Duzib138G1354 Durio zibethinus
Duzib170G0932 Durio zibethinus
Duzib211G0255 Durio zibethinus
ECA236G4570 Erigeron canadensis
EL10Ac3g06027 Beta vulgaris
Eucgr.A00039 Eucalyptus grandis
Eucgr.B03613 Eucalyptus grandis
Eucgr.C02476 Eucalyptus grandis
Eucgr.H00681 Eucalyptus grandis
FAN01G1095 Fragaria x ananassa
FAN01G2016 Fragaria x ananassa
FAN04G1289 Fragaria x ananassa
FAN06G0586 Fragaria x ananassa
FAN06G2565 Fragaria x ananassa
FAN08G2486 Fragaria x ananassa
FAN10G3558 Fragaria x ananassa
FAN18G3379 Fragaria x ananassa
FvH4_5g32960 Fragaria vesca
FvH4_7g08180 Fragaria vesca
Glyma.11G125400 Glycine max
Glyma.13G346400 Glycine max
Glyma.15G027800 Glycine max
Gohir.A07G157900 Gossypium hirsutum
Gohir.A11G145000 Gossypium hirsutum
Gohir.D11G153200 Gossypium hirsutum
Gorai.007G162100 Gossypium raimondii
Gorai.N001500 Gossypium raimondii
HanXRQChr01g0010521 Helianthus annuus
HanXRQChr10g0281191 Helianthus annuus
Haze_01421 Corylus avellana
Hma1.2p1_0161F.1_g071790 Hydrangea macrophylla
Hma1.2p1_0635F.1_g193140 Hydrangea macrophylla
Hma1.2p1_2403F.1_g321420 Hydrangea macrophylla
HPP92_015668 Vanilla planifolia
Hund03185 Selenicereus undatus
Lalb_Chr22g0352031 Lupinus albus
Lalb_Chr24g0396641 Lupinus albus
Lj2C1109G11 Lonicera japonica
Lj3g0024368 Lotus japonicus
Lj3g0026330 Lotus japonicus
Lsat_1_v5_gn_5_175601 Lactuca sativa
Lsat_1_v5_gn_8_98601 Lactuca sativa
Manes.11G127100 Manihot esculenta
Manes.12G057507 Manihot esculenta
Manes.12G057905 Manihot esculenta
Manes.12G058104 Manihot esculenta
Manes.12G058903 Manihot esculenta
Manes.13G057600 Manihot esculenta
Mapoly0080s0067 Marchantia polymorpha
MBI02_g24302_MAGBIO Magnolia biondii
MBI18_g24478_MAGBIO Magnolia biondii
MCO15G241 Micromonas commoda
MD00G1127600 Malus domestica
MD04G1046700 Malus domestica
Medtr2g099360 Medicago truncatula
MELO3C017788.2 Cucumis melo
Migut.N00690 Erythranthe guttata
MSTRG.12731 Avicennia marina
MSTRG.12733 Avicennia marina
MSTRG.17947 Avicennia marina
Nitab4.5_0002641g0020 Nicotiana tabacum
Nitab4.5_0003952g0050 Nicotiana tabacum
Nn1g09539 Nelumbo nucifera
Nn7g37555 Nelumbo nucifera
Oeu013421.2 Olea europaea
Oeu020438.1 Olea europaea
Oeu020439.1 Olea europaea
Os03g0786000 Oryza sativa ssp. japonica
Os07g0152800 Oryza sativa ssp. japonica
Peaxi162Scf00372g00722 Petunia axillaris
Peaxi162Scf00995g00322 Petunia axillaris
PGR083G0513 Punica granatum
PGR102G0947 Punica granatum
PGSC0003DMG400020552 Solanum tuberosum
PGSC0003DMG400020658 Solanum tuberosum
Phvul.005G155400 Phaseolus vulgaris
Phvul.011G052000 Phaseolus vulgaris
Potri.014G197200 Populus trichocarpa
Potri.017G018400 Populus trichocarpa
Pp3c11_19790 Physcomitrium patens
Prupe.1G200400 Prunus persica
Psat5g291600 Pisum sativum
PSO017G3256 Papaver somniferum
PSO837G0022 Papaver somniferum
QL10p052081 Quercus lobata
RcHm_v2.0_Chr1g0340971 Rosa chinensis
RcHm_v2.0_Chr7g0230961 Rosa chinensis
Sabra06G0076200 Salix brachista
Sabra07G0108500 Salix brachista
Sabra07G0120800 Salix brachista
Sabra14G0133100 Salix brachista
Sc19g0002790 Simmondsia chinensis
Sed0005976 Sechium edule
Sed0021377 Sechium edule
SEGI_01562 Sequoiadendron giganteum
SEGI_02285 Sequoiadendron giganteum
SEGI_07594 Sequoiadendron giganteum
SEGI_24544 Sequoiadendron giganteum
SEGI_40649 Sequoiadendron giganteum
SGA_v2.0_scaffold77G25327 Striga asiatica
SGA_v2.0_scaffold95G28678 Striga asiatica
SMO146G0020 Selaginella moellendorffii
Solyc06g007700.4 Solanum lycopersicum
Sopen06g002590 Solanum pennellii
Sp3g06480 Schrenkiella parvula
TAR362G1102 Trochodendron aralioides
TAR365G1107 Trochodendron aralioides
TAR633G2284 Trochodendron aralioides
THA.LOC104819024 Tarenaya hassleriana
THA.LOC104822456 Tarenaya hassleriana
Thecc.01G205200 Theobroma cacao
Thecc.04G171800 Theobroma cacao
Thhalv10021215m.g Eutrema salsugineum
TPR.G6564 Trifolium pratense
TWI18G0659 Tripterygium wilfordii
TWI36G1391 Tripterygium wilfordii
TWI36G1709 Tripterygium wilfordii
unitig_22.g5196 Utricularia gibba
unitig_8.g3681 Utricularia gibba
vmacro14674 Vaccinium macrocarpon
VMungo1080G0920 Vigna mungo
VMungo1127G1572 Vigna mungo
Zm00001eb059960 Zea mays
Zm00001eb117520 Zea mays

User provided reference genes

Program Settings