Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p16290 Brassica napus
Aa31LG3G590 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2817 Anthoceros agrestis
Actinidia19535 Actinidia chinensis
Ah.02g128710 Amaranthus hybridus
Ah.03g136510 Amaranthus hybridus
AL7G45460 Arabidopsis lyrata
Aqoxy5G02922 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.603RL1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q8LDW0 Arachis hypogaea
AT5G36880 Arabidopsis thaliana
ATR0582G187 Amborella trichopoda
Atru.chr6.2744 Acer truncatum
AUR62017459 Chenopodium quinoa
AUR62032527 Chenopodium quinoa
BcaB04g18331 Brassica carinata
BcaB06g27038 Brassica carinata
BcaC02g08777 Brassica carinata
BolC4t26673H Brassica oleracea
BraA04t17268Z Brassica rapa
C04p50770 Brassica napus
CAN.G473.168 Capsicum annuum
CANSAT64G2350 Cannabis sativa
CARHR216250 Cardamine hirsuta
Carub.0007s3210 Capsella rubella
Ca_08241_v3 Cicer arietinum L.
CBR_g19652 Chara braunii
CBR_g32518 Chara braunii
Cc07_g01460 Coffea canephora
Cc07_g01470 Coffea canephora
Cc11_g07440 Coffea canephora
Cc11_g07450 Coffea canephora
CDE02G2343 Ceratophyllum demersum
CDE05G3017 Ceratophyllum demersum
CDE06G2431 Ceratophyllum demersum
Cfa007126 Carpinus fangiana
Cfa025252 Carpinus fangiana
Cfa025265 Carpinus fangiana
Ciclev10014353m.g Citrus clementina
CiPaw.03G114200 Carya illinoinensis
ClCG01G007930 Citrullus lanatus
ClCG05G012410 Citrullus lanatus
COL.COLO4_13414 Corchorus olitorius
Cpa.g.sc70.30 Carica papaya
Cre01.g055408 Chlamydomonas reinhardtii
Cre01.g071662 Chlamydomonas reinhardtii
Cre07.g353450 Chlamydomonas reinhardtii
CsaV3_3G020130 Cucumis sativus L.
CsaV3_5G021900 Cucumis sativus L.
CSS0001904 Camellia sinensis var. sinensis
CSS0031457 Camellia sinensis var. sinensis
DCAR_000960 Daucus carota
DCAR_014314 Daucus carota
Dinv33256 Davidia involucrata
Duzib114G0127 Durio zibethinus
Duzib128G1600 Durio zibethinus
ECA238G4746 Erigeron canadensis
ECA246G1064 Erigeron canadensis
EL10Ac1g01743 Beta vulgaris
EL10Ac6g13914 Beta vulgaris
Eucgr.G01905 Eucalyptus grandis
FAN05G4622 Fragaria x ananassa
FAN09G3990 Fragaria x ananassa
FAN14G2381 Fragaria x ananassa
FvH4_6g54480 Fragaria vesca
Glyma.16G044600 Glycine max
Glyma.19G107300 Glycine max
Gohir.A05G405300 Gossypium hirsutum
Gohir.A06G180800 Gossypium hirsutum
Gohir.D04G010300 Gossypium hirsutum
Gohir.D06G187600 Gossypium hirsutum
Gorai.010G219900 Gossypium raimondii
Gorai.012G012200 Gossypium raimondii
GSVIVG01032938001 Vitis vinifera
HanXRQChr07g0197941 Helianthus annuus
HanXRQChr07g0197951 Helianthus annuus
HanXRQChr07g0197971 Helianthus annuus
HanXRQChr17g0550861 Helianthus annuus
Haze_14994 Corylus avellana
Haze_26545 Corylus avellana
Haze_26668 Corylus avellana
Hma1.2p1_0421F.1_g149840 Hydrangea macrophylla
HPP92_008234 Vanilla planifolia
HPP92_023104 Vanilla planifolia
Hund04148 Selenicereus undatus
Hund12915 Selenicereus undatus
Lalb_Chr14g0364211 Lupinus albus
Lalb_Chr22g0359411 Lupinus albus
Lalb_Chr22g0359421 Lupinus albus
Lj1g0018654 Lotus japonicus
Lj1g0025699 Lotus japonicus
Lj7C620T2 Lonicera japonica
Lsat_1_v5_gn_2_95161 Lactuca sativa
Lsat_1_v5_gn_3_105260 Lactuca sativa
Lsat_1_v5_gn_4_113941 Lactuca sativa
Lsat_1_v5_gn_4_97721 Lactuca sativa
Manes.04G095800 Manihot esculenta
Manes.04G095900 Manihot esculenta
Manes.11G072000 Manihot esculenta
Mapoly0024s0068 Marchantia polymorpha
Mapoly0041s0059 Marchantia polymorpha
MBI07_g24942_MAGBIO Magnolia biondii
MCO06G185 Micromonas commoda
MCO13G321 Micromonas commoda
MD09G1000400 Malus domestica
MD17G1003300 Malus domestica
Medtr7g084850 Medicago truncatula
MELO3C005081.2 Cucumis melo
MELO3C014749.2 Cucumis melo
Migut.F00005 Erythranthe guttata
MSTRG.24123 Avicennia marina
MSTRG.3032 Avicennia marina
Nitab4.5_0000055g0220 Nicotiana tabacum
Nitab4.5_0002901g0010 Nicotiana tabacum
Nitab4.5_0006606g0020 Nicotiana tabacum
Nitab4.5_0007193g0010 Nicotiana tabacum
Nitab4.5_0009445g0010 Nicotiana tabacum
Nn3g16184 Nelumbo nucifera
Nn3g16186 Nelumbo nucifera
Nn4g22048 Nelumbo nucifera
Oeu035283.1 Olea europaea
Os02g0525900 Oryza sativa ssp. japonica
Os04g0404800 Oryza sativa ssp. japonica
Peaxi162Scf00420g00946 Petunia axillaris
Peaxi162Scf01054g00026 Petunia axillaris
PGR042G3037 Punica granatum
PGR142G3918 Punica granatum
PGSC0003DMG400004100 Solanum tuberosum
PGSC0003DMG400020231 Solanum tuberosum
Phvul.001G097800 Phaseolus vulgaris
Potri.014G140900 Populus trichocarpa
Pp3c11_11320 Physcomitrium patens
Pp3c1_12020 Physcomitrium patens
Pp3c20_22210 Physcomitrium patens
PRCOL_00001628 Prasinoderma coloniale
PRCOL_00003027 Prasinoderma coloniale
Prupe.3G315800 Prunus persica
Psat3g091520 Pisum sativum
PSO017G1153 Papaver somniferum
PSO478G4644 Papaver somniferum
QL02p068081 Quercus lobata
RcHm_v2.0_Chr2g0176771 Rosa chinensis
Rhsim08G0037000 Rhododendron simsii
Sabra14G0106200 Salix brachista
SalBow4G1463 Salvia bowleyana
Sc03g0005450 Simmondsia chinensis
Sed0000094 Sechium edule
Sed0016846 Sechium edule
Sed0021768 Sechium edule
SEGI_21439 Sequoiadendron giganteum
SEGI_29007 Sequoiadendron giganteum
SGA_v2.0_scaffold44G16959 Striga asiatica
SMO137G0374 Selaginella moellendorffii
SMO361G0284 Selaginella moellendorffii
Solyc02g094640.4 Solanum lycopersicum
Solyc07g017860.3 Solanum lycopersicum
Sopen02g039280 Solanum pennellii
Sopen07g006650 Solanum pennellii
Sp7g05640 Schrenkiella parvula
TAR371G0004 Trochodendron aralioides
TAR371G0495 Trochodendron aralioides
TAR374G0877 Trochodendron aralioides
TAR622G0539 Trochodendron aralioides
THA.LOC104809015 Tarenaya hassleriana
THA.LOC104809016 Tarenaya hassleriana
THA.LOC104815254 Tarenaya hassleriana
Thecc.04G053400 Theobroma cacao
Thhalv10027656m.g Eutrema salsugineum
TPR.G159 Trifolium pratense
TPR.G19480 Trifolium pratense
TPR.G20658 Trifolium pratense
TPR.G28319 Trifolium pratense
TWI32G0714 Tripterygium wilfordii
unitig_736.g22468 Utricularia gibba
unitig_736.g22469 Utricularia gibba
vmacro22108 Vaccinium macrocarpon
vmacro22109 Vaccinium macrocarpon
vmacro22928 Vaccinium macrocarpon
VMungo1383G3364 Vigna mungo
Zm00001eb084450 Zea mays
Zm00001eb242380 Zea mays

User provided reference genes

Program Settings