Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p13100 Brassica napus
A05p16340 Brassica napus
Aa31LG2G2350 Aethionema arabicum
Aa31LG9G17930 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1258 Anthoceros agrestis
Actinidia03285 Actinidia chinensis
Actinidia06802 Actinidia chinensis
Ah.04g159020 Amaranthus hybridus
Ah.06g195440 Amaranthus hybridus
AL2G20220 Arabidopsis lyrata
AL7G45160 Arabidopsis lyrata
Aqoxy2G04029 Aquilegia oxysepala
Aqoxy6G02348 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1B1F65 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.424XKM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R9V655 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U6L591 Arachis hypogaea
AT1G65220 Arabidopsis thaliana
AT5G36230 Arabidopsis thaliana
ATR0215G022 Amborella trichopoda
Atru.chr12.1771 Acer truncatum
AUR62000304 Chenopodium quinoa
AUR62006649 Chenopodium quinoa
BcaB02g08039 Brassica carinata
BcaB05g24096 Brassica carinata
BcaB06g27011 Brassica carinata
BcaC03g14684 Brassica carinata
BcaC08g44332 Brassica carinata
BolC2t08264H Brassica oleracea
BolC6t36955H Brassica oleracea
BraA02t06366Z Brassica rapa
BraA05t20541Z Brassica rapa
C02p21240 Brassica napus
C06p17610 Brassica napus
C06p17620 Brassica napus
CAN.G1086.2 Capsicum annuum
CAN.G254.1 Capsicum annuum
CAN.G694.22 Capsicum annuum
CAN.G96.1 Capsicum annuum
CANSAT54G2490 Cannabis sativa
CARHR056830 Cardamine hirsuta
CARHR216500 Cardamine hirsuta
Carub.0002s1075 Capsella rubella
Carub.0007s3190 Capsella rubella
Ca_07991_v3 Cicer arietinum L.
CBR_g11137 Chara braunii
CBR_g21840 Chara braunii
Cc09_g03700 Coffea canephora
Cc09_g03710 Coffea canephora
CDE02G2989 Ceratophyllum demersum
CDE06G0032 Ceratophyllum demersum
Ciclev10011861m.g Citrus clementina
CiPaw.07G081100 Carya illinoinensis
CiPaw.08G114700 Carya illinoinensis
ClCG11G009850 Citrullus lanatus
COL.COLO4_38033 Corchorus olitorius
Cpa.g.sc39.12 Carica papaya
Cpa.g.sc39.13 Carica papaya
Cre06.g298350 Chlamydomonas reinhardtii
CsaV3_2G010490 Cucumis sativus L.
CSS0003666 Camellia sinensis var. sinensis
CSS0027041 Camellia sinensis var. sinensis
DCAR_024893 Daucus carota
Dinv10505 Davidia involucrata
Dinv29094 Davidia involucrata
Duzib106G0094 Durio zibethinus
Duzib128G0856 Durio zibethinus
Duzib128G2042 Durio zibethinus
Duzib177G0044 Durio zibethinus
ECA238G1935 Erigeron canadensis
EL10Ac4g09959 Beta vulgaris
Eucgr.B01418 Eucalyptus grandis
Eucgr.H01394 Eucalyptus grandis
FAN02G0116 Fragaria x ananassa
FAN05G0002 Fragaria x ananassa
FAN05G4209 Fragaria x ananassa
FAN09G4891 Fragaria x ananassa
FAN14G4155 Fragaria x ananassa
FAN19G1016 Fragaria x ananassa
FvH4_1g28180 Fragaria vesca
FvH4_6g00450 Fragaria vesca
Glyma.09G249900 Glycine max
Glyma.18G242500 Glycine max
Gohir.A05G392700 Gossypium hirsutum
Gohir.A08G226000 Gossypium hirsutum
Gohir.D04G024400 Gossypium hirsutum
Gohir.D08G246400 Gossypium hirsutum
Gorai.004G262900 Gossypium raimondii
Gorai.012G026900 Gossypium raimondii
GSVIVG01019078001 Vitis vinifera
HanXRQChr01g0006971 Helianthus annuus
HanXRQChr07g0194781 Helianthus annuus
HanXRQChr14g0454791 Helianthus annuus
Haze_04566 Corylus avellana
Haze_26180 Corylus avellana
Hma1.2p1_0609F.1_g188350 Hydrangea macrophylla
Hma1.2p1_0609F.1_g188360 Hydrangea macrophylla
Hma1.2p1_3457F.1_g336095 Hydrangea macrophylla
HPP92_020238 Vanilla planifolia
Hund07351 Selenicereus undatus
Hund21902 Selenicereus undatus
Lalb_Chr01g0020451 Lupinus albus
Lalb_Chr01g0020461 Lupinus albus
Lalb_Chr02g0149471 Lupinus albus
Lalb_Chr03g0038661 Lupinus albus
Lalb_Chr21g0311461 Lupinus albus
Lj1A575G21 Lonicera japonica
Lj1A595G25 Lonicera japonica
Lj1C575G1 Lonicera japonica
Lj1C595G1 Lonicera japonica
Lj1g0016551 Lotus japonicus
Lsat_1_v5_gn_2_108360 Lactuca sativa
Lsat_1_v5_gn_2_49320 Lactuca sativa
Manes.12G005200 Manihot esculenta
Manes.13G005100 Manihot esculenta
Mapoly0005s0128 Marchantia polymorpha
MD00G1113300 Malus domestica
MD04G1245300 Malus domestica
MD12G1086500 Malus domestica
MD13G1060900 Malus domestica
Medtr7g080110 Medicago truncatula
MELO3C008571.2 Cucumis melo
Migut.F01871 Erythranthe guttata
Migut.F02121 Erythranthe guttata
MSTRG.27392 Avicennia marina
MSTRG.8209 Avicennia marina
Nitab4.5_0000083g0110 Nicotiana tabacum
Nitab4.5_0000971g0050 Nicotiana tabacum
Nitab4.5_0001435g0070 Nicotiana tabacum
Nitab4.5_0006298g0010 Nicotiana tabacum
Nn1g09834 Nelumbo nucifera
Oeu046890.2 Olea europaea
Oeu062047.1 Olea europaea
Os11g0414000 Oryza sativa ssp. japonica
Peaxi162Scf00156g00215 Petunia axillaris
PGR031G2727 Punica granatum
PGR119G1052 Punica granatum
PGSC0003DMG400023474 Solanum tuberosum
Phvul.008G054000 Phaseolus vulgaris
Potri.013G085600 Populus trichocarpa
Potri.019G053600 Populus trichocarpa
Pp3c18_18860 Physcomitrium patens
Pp3c19_1810 Physcomitrium patens
Pp3c21_10580 Physcomitrium patens
Prupe.6G361900 Prunus persica
Psat3g102960 Pisum sativum
PSO170G3829 Papaver somniferum
PSO357G0157 Papaver somniferum
QL01p049619 Quercus lobata
RcHm_v2.0_Chr3g0447821 Rosa chinensis
Rhsim02G0249700 Rhododendron simsii
Rhsim09G0130400 Rhododendron simsii
Sabra13G0078100 Salix brachista
SalBow1G2501 Salvia bowleyana
Sc09g0001440 Simmondsia chinensis
Sc16g0010420 Simmondsia chinensis
Sed0016020 Sechium edule
SMO340G0078 Selaginella moellendorffii
Solyc05g055770.3 Solanum lycopersicum
Sopen05g034180 Solanum pennellii
Sp5g19900 Schrenkiella parvula
Sp7g05930 Schrenkiella parvula
TAR365G1231 Trochodendron aralioides
TAR636G0205 Trochodendron aralioides
THA.LOC104805704 Tarenaya hassleriana
THA.LOC104821913 Tarenaya hassleriana
THA.LOC104823808 Tarenaya hassleriana
Thecc.05G194200 Theobroma cacao
Thhalv10004315m.g Eutrema salsugineum
Thhalv10018708m.g Eutrema salsugineum
TPR.G18384 Trifolium pratense
TPR.G21729 Trifolium pratense
TPR.G31806 Trifolium pratense
TWI36G0808 Tripterygium wilfordii
TWI75G0041 Tripterygium wilfordii
unitig_26.g9578 Utricularia gibba
unitig_749.g13493 Utricularia gibba
vmacro10403 Vaccinium macrocarpon
VMungo1383G3136 Vigna mungo
Zm00001eb090730 Zea mays
Zm00001eb200810 Zea mays

User provided reference genes

Program Settings