Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p22390 Brassica napus
A01p33000 Brassica napus
Aa31LG8G8720 Aethionema arabicum
Aa31LG9G2270 Aethionema arabicum
Actinidia22425 Actinidia chinensis
AL3G36350 Arabidopsis lyrata
AL7G40590 Arabidopsis lyrata
Aqoxy4G00416 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.H0VTBF Arachis hypogaea
AT3G22160 Arabidopsis thaliana
AT4G15120 Arabidopsis thaliana
Atru.chr10.409 Acer truncatum
Atru.chr8.1002 Acer truncatum
BcaB04g20540 Brassica carinata
BcaB06g26318 Brassica carinata
BcaC05g28098 Brassica carinata
BcaC09g49150 Brassica carinata
BcaC09g50190 Brassica carinata
BcaC09g50191 Brassica carinata
BcaC09g50198 Brassica carinata
BcaNung00304 Brassica carinata
BolC1t02727H Brassica oleracea
BolC1t04173H Brassica oleracea
BolC5t32867H Brassica oleracea
BraA01t02156Z Brassica rapa
BraA01t03420Z Brassica rapa
BraA05t21543Z Brassica rapa
C01p27950 Brassica napus
C01p42110 Brassica napus
C05p41250 Brassica napus
CAN.G1299.6 Capsicum annuum
CANSAT35G1226 Cannabis sativa
CARHR098040 Cardamine hirsuta
CARHR221860 Cardamine hirsuta
Carub.0003s2233 Capsella rubella
Carub.0007s2687 Capsella rubella
Ca_01992_v3 Cicer arietinum L.
Cfa000664 Carpinus fangiana
Ciclev10016595m.g Citrus clementina
CiPaw.09G073700 Carya illinoinensis
CiPaw.10G062300 Carya illinoinensis
CiPaw.10G062400 Carya illinoinensis
ClCG01G025570 Citrullus lanatus
ClCG11G016820 Citrullus lanatus
COL.COLO4_17627 Corchorus olitorius
COL.COLO4_17629 Corchorus olitorius
COL.COLO4_33765 Corchorus olitorius
Cpa.g.sc30.129 Carica papaya
Cpa.g.sc30.131 Carica papaya
CsaV3_4G032360 Cucumis sativus L.
DCAR_001286 Daucus carota
DCAR_004339 Daucus carota
DCAR_021260 Daucus carota
DCAR_024218 Daucus carota
Dinv31174 Davidia involucrata
Duzib132G0260 Durio zibethinus
Duzib132G1175 Durio zibethinus
Duzib248G0332 Durio zibethinus
Duzib248G1013 Durio zibethinus
ECA240G2605 Erigeron canadensis
ECA246G2171 Erigeron canadensis
Eucgr.D00026 Eucalyptus grandis
FAN02G4313 Fragaria x ananassa
FAN05G3549 Fragaria x ananassa
FAN09G4092 Fragaria x ananassa
FAN11G1675 Fragaria x ananassa
FAN14G1837 Fragaria x ananassa
FAN16G0324 Fragaria x ananassa
FAN21G0474 Fragaria x ananassa
FAN25G3700 Fragaria x ananassa
FvH4_3g12720 Fragaria vesca
FvH4_6g39500 Fragaria vesca
Glyma.05G133000 Glycine max
Glyma.08G087400 Glycine max
Glyma.09G051900 Glycine max
Glyma.15G158200 Glycine max
Gohir.A07G083901 Gossypium hirsutum
Gohir.A12G048100 Gossypium hirsutum
Gohir.A12G048200 Gossypium hirsutum
Gohir.D07G087400 Gossypium hirsutum
Gohir.D12G046900 Gossypium hirsutum
Gohir.D12G047000 Gossypium hirsutum
Gorai.001G093400 Gossypium raimondii
Gorai.008G049400 Gossypium raimondii
Gorai.008G049600 Gossypium raimondii
Haze_06156 Corylus avellana
Haze_06157 Corylus avellana
Hma1.2p1_0088F.1_g045023 Hydrangea macrophylla
Hma1.2p1_0088F.1_g045026 Hydrangea macrophylla
Hma1.2p1_0088F.1_g045030 Hydrangea macrophylla
Hma1.2p1_0088F.1_g045040 Hydrangea macrophylla
Lalb_Chr04g0247001 Lupinus albus
Lalb_Chr12g0208981 Lupinus albus
Lalb_Chr15g0083801 Lupinus albus
Lalb_Chr18g0052151 Lupinus albus
Lj1P1147T18 Lonicera japonica
Lsat_1_v5_gn_3_116801 Lactuca sativa
Manes.03G074500 Manihot esculenta
Medtr2g035850 Medicago truncatula
Medtr4g094698 Medicago truncatula
MELO3C007028.2 Cucumis melo
MELO3C026380.2 Cucumis melo
Migut.M02002 Erythranthe guttata
MSTRG.12273 Avicennia marina
MSTRG.14877 Avicennia marina
MSTRG.6598 Avicennia marina
Nitab4.5_0000138g0140 Nicotiana tabacum
Nitab4.5_0000170g0400 Nicotiana tabacum
Nitab4.5_0000443g0140 Nicotiana tabacum
Nitab4.5_0000443g0160 Nicotiana tabacum
Nitab4.5_0002232g0070 Nicotiana tabacum
Nitab4.5_0002305g0070 Nicotiana tabacum
Nitab4.5_0008708g0020 Nicotiana tabacum
Nitab4.5_0008965g0010 Nicotiana tabacum
Oeu008729.1 Olea europaea
Oeu022924.1 Olea europaea
Oeu041444.1 Olea europaea
Oeu046931.1 Olea europaea
Oeu052638.1 Olea europaea
Oeu052639.1 Olea europaea
Oeu054525.1 Olea europaea
Peaxi162Scf00047g00243 Petunia axillaris
Peaxi162Scf00198g00104 Petunia axillaris
Peaxi162Scf00199g00093 Petunia axillaris
Peaxi162Scf00199g00915 Petunia axillaris
Peaxi162Scf00556g00041 Petunia axillaris
Peaxi162Scf00876g00004 Petunia axillaris
Peaxi162Scf01809g00001 Petunia axillaris
PGR004G1269 Punica granatum
PGR031G0807 Punica granatum
PGSC0003DMG400009434 Solanum tuberosum
PGSC0003DMG400009442 Solanum tuberosum
PGSC0003DMG400011745 Solanum tuberosum
PGSC0003DMG400014938 Solanum tuberosum
Phvul.002G189900 Phaseolus vulgaris
Phvul.008G290700 Phaseolus vulgaris
Phvul.009G241900 Phaseolus vulgaris
Potri.001G158800 Populus trichocarpa
Potri.003G075800 Populus trichocarpa
Prupe.3G185800 Prunus persica
Prupe.4G116000 Prunus persica
Psat1g149760 Pisum sativum
PSO675G7834 Papaver somniferum
QL11p012767 Quercus lobata
RcHm_v2.0_Chr2g0153531 Rosa chinensis
RcHm_v2.0_Chr5g0020711 Rosa chinensis
Sabra01G0133000 Salix brachista
Sabra03G0046300 Salix brachista
SalBow3G3892 Salvia bowleyana
SalBow8G4256 Salvia bowleyana
Sc05g0004730 Simmondsia chinensis
Sed0006784 Sechium edule
Sed0022416 Sechium edule
Sed0023526 Sechium edule
SGA_v2.0_scaffold175G39345 Striga asiatica
SGA_v2.0_scaffold175G39346 Striga asiatica
SGA_v2.0_scaffold49G18379 Striga asiatica
SGA_v2.0_scaffold73G24425 Striga asiatica
Solyc02g031990.1 Solanum lycopersicum
Solyc02g068460.1 Solanum lycopersicum
Solyc07g043250.1 Solanum lycopersicum
Sopen02g010250 Solanum pennellii
Sopen02g017600 Solanum pennellii
Sopen02g017610 Solanum pennellii
Sopen07g022830 Solanum pennellii
Sp3g19970 Schrenkiella parvula
Sp7g13350 Schrenkiella parvula
TAR627G0259 Trochodendron aralioides
THA.LOC104803007 Tarenaya hassleriana
THA.LOC104809076 Tarenaya hassleriana
THA.LOC104822519 Tarenaya hassleriana
Thecc.02G005300 Theobroma cacao
Thecc.02G005500 Theobroma cacao
Thhalv10021568m.g Eutrema salsugineum
Thhalv10026342m.g Eutrema salsugineum
TPR.G31240 Trifolium pratense
TPR.G31858 Trifolium pratense
TWI32G0059 Tripterygium wilfordii
TWI38G0220 Tripterygium wilfordii
TWI63G0470 Tripterygium wilfordii
VMungo0251G2884 Vigna mungo
VMungo1309G0233 Vigna mungo

User provided reference genes

Program Settings