Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p02360 Brassica napus
A01p02370 Brassica napus
A01p23830 Brassica napus
A03p48010 Brassica napus
A03p64280 Brassica napus
A08p22170 Brassica napus
A09p44010 Brassica napus
Aa31LG1G15010 Aethionema arabicum
Aa31LG4G19000 Aethionema arabicum
Aa31LG6G13290 Aethionema arabicum
Aa31LG8G15780 Aethionema arabicum
Ah.03g141100 Amaranthus hybridus
AL3G51440 Arabidopsis lyrata
AL5G31260 Arabidopsis lyrata
AL7G14560 Arabidopsis lyrata
AL8G45040 Arabidopsis lyrata
Aqoxy6G01157 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.IAMR94 Arachis hypogaea
AT2G18200 Arabidopsis thaliana
AT2G18210 Arabidopsis thaliana
AT3G50900 Arabidopsis thaliana
AT4G36500 Arabidopsis thaliana
AT5G66490 Arabidopsis thaliana
ATR0568G115 Amborella trichopoda
ATR0568G162 Amborella trichopoda
Atru.chr3.624 Acer truncatum
BcaB01g00567 Brassica carinata
BcaB02g10024 Brassica carinata
BcaB03g12394 Brassica carinata
BcaB05g23252 Brassica carinata
BcaC01g00464 Brassica carinata
BcaC06g33070 Brassica carinata
BcaC06g33072 Brassica carinata
BcaC06g33329 Brassica carinata
BcaC06g33330 Brassica carinata
BcaC06g34708 Brassica carinata
BcaC07g39558 Brassica carinata
BcaC09g50052 Brassica carinata
BcaNung00728 Brassica carinata
BcaNung00729 Brassica carinata
BcaNung05311 Brassica carinata
BcaNung05312 Brassica carinata
BolC1t00245H Brassica oleracea
BolC1t00246H Brassica oleracea
BolC1t02898H Brassica oleracea
BolC3t20271H Brassica oleracea
BolC7t45120H Brassica oleracea
BolC7t46598H Brassica oleracea
BolC8t50229H Brassica oleracea
BraA01t00224Z Brassica rapa
BraA01t00225Z Brassica rapa
BraA01t02291Z Brassica rapa
BraA03t13909Z Brassica rapa
BraA03t15498Z Brassica rapa
BraA08t34177Z Brassica rapa
BraA09t39859Z Brassica rapa
C01p02570 Brassica napus
C01p02580 Brassica napus
C01p29550 Brassica napus
C03p80150 Brassica napus
C07p46020 Brassica napus
C07p61730 Brassica napus
C08p26110 Brassica napus
CAN.G358.54 Capsicum annuum
CARHR160470 Cardamine hirsuta
CARHR244820 Cardamine hirsuta
CARHR281260 Cardamine hirsuta
Carub.0003s3236 Capsella rubella
Carub.0003s3237 Capsella rubella
Carub.0005s1729 Capsella rubella
Carub.0007s0382 Capsella rubella
Ca_22293_v3 Cicer arietinum L.
COL.COLO4_22043 Corchorus olitorius
Cpa.g.sc6.148 Carica papaya
CsaV3_6G046430 Cucumis sativus L.
CSS0002171 Camellia sinensis var. sinensis
DCAR_016030 Daucus carota
Duzib147G0407 Durio zibethinus
Duzib264G0487 Durio zibethinus
ECA238G1778 Erigeron canadensis
ECA238G4264 Erigeron canadensis
EL10As8g23917 Beta vulgaris
Glyma.01G172100 Glycine max
Glyma.02G054900 Glycine max
Glyma.02G055000 Glycine max
Glyma.11G071100 Glycine max
Glyma.16G135400 Glycine max
Glyma.16G135600 Glycine max
Gohir.A11G183100 Gossypium hirsutum
Gohir.A12G063700 Gossypium hirsutum
Gohir.D11G189500 Gossypium hirsutum
Gohir.D12G063500 Gossypium hirsutum
Gorai.007G201700 Gossypium raimondii
Gorai.008G066800 Gossypium raimondii
GSVIVG01018926001 Vitis vinifera
HanXRQChr07g0191651 Helianthus annuus
HanXRQChr14g0440581 Helianthus annuus
Hma1.2p1_1297F.1_g274110 Hydrangea macrophylla
HPP92_023423 Vanilla planifolia
Lalb_Chr05g0212681 Lupinus albus
Lalb_Chr09g0322201 Lupinus albus
Lalb_Chr09g0333461 Lupinus albus
Lalb_Chr16g0391061 Lupinus albus
Lj2g0025508 Lotus japonicus
Lj4g0007128 Lotus japonicus
Lj4g0009905 Lotus japonicus
Lj4g0028115 Lotus japonicus
Lsat_1_v5_gn_2_77300 Lactuca sativa
Lsat_1_v5_gn_2_77320 Lactuca sativa
Lsat_1_v5_gn_2_77360 Lactuca sativa
Lsat_1_v5_gn_8_64500 Lactuca sativa
Lsat_1_v5_gn_9_118581 Lactuca sativa
Manes.01G137700 Manihot esculenta
Manes.02G096100 Manihot esculenta
MBI10_g06731_MAGBIO Magnolia biondii
Medtr5g020860 Medicago truncatula
Medtr7g026910 Medicago truncatula
Medtr8g077145 Medicago truncatula
MELO3C007840.2 Cucumis melo
Migut.H02530 Erythranthe guttata
Nitab4.5_0000178g0280 Nicotiana tabacum
Nitab4.5_0000178g0350 Nicotiana tabacum
Nitab4.5_0007490g0050 Nicotiana tabacum
Nitab4.5_0012261g0010 Nicotiana tabacum
Nn1g04930 Nelumbo nucifera
Nn5g29663 Nelumbo nucifera
Oeu025181.1 Olea europaea
Oeu035340.1 Olea europaea
Peaxi162Scf00366g00066 Petunia axillaris
Peaxi162Scf00366g00073 Petunia axillaris
Peaxi162Scf00366g00711 Petunia axillaris
PGR119G0937 Punica granatum
PGSC0003DMG400003518 Solanum tuberosum
PGSC0003DMG400003519 Solanum tuberosum
PGSC0003DMG401003517 Solanum tuberosum
PGSC0003DMG402003517 Solanum tuberosum
Phvul.002G032400 Phaseolus vulgaris
Phvul.003G255300 Phaseolus vulgaris
Phvul.003G255400 Phaseolus vulgaris
Potri.007G022200 Populus trichocarpa
Potri.007G022300 Populus trichocarpa
Psat2g157880 Pisum sativum
Psat4g094680 Pisum sativum
Psat4g094720 Pisum sativum
Psat4g094760 Pisum sativum
QL06p047086 Quercus lobata
Sabra07G0019300 Salix brachista
Sabra07G0019500 Salix brachista
SalBow8G4897 Salvia bowleyana
Sc03g0003120 Simmondsia chinensis
Sc16g0002610 Simmondsia chinensis
Sed0008243 Sechium edule
Sed0017680 Sechium edule
SGA_v2.0_scaffold12G06299 Striga asiatica
SGA_v2.0_scaffold51G18826 Striga asiatica
SGA_v2.0_scaffold51G18830 Striga asiatica
Solyc02g085005.1 Solanum lycopersicum
Solyc02g085010.1 Solanum lycopersicum
Sopen02g029690 Solanum pennellii
Sopen02g029700 Solanum pennellii
Sp1g22390 Schrenkiella parvula
Sp2g30240 Schrenkiella parvula
Sp7g34150 Schrenkiella parvula
Sp7g34160 Schrenkiella parvula
TAR247G0001 Trochodendron aralioides
THA.LOC104807465 Tarenaya hassleriana
THA.LOC104819775 Tarenaya hassleriana
THA.LOC104826691 Tarenaya hassleriana
Thecc.01G031800 Theobroma cacao
Thhalv10005334m.g Eutrema salsugineum
Thhalv10010834m.g Eutrema salsugineum
Thhalv10022919m.g Eutrema salsugineum
Thhalv10023197m.g Eutrema salsugineum
Thhalv10026576m.g Eutrema salsugineum
TPR.G2362 Trifolium pratense
TPR.G24102 Trifolium pratense
TPR.G24112 Trifolium pratense
TWI09G1369 Tripterygium wilfordii
unitig_0.g473 Utricularia gibba
VMungo0251G0164 Vigna mungo
VMungo0251G1302 Vigna mungo
VMungo1215G0776 Vigna mungo

User provided reference genes

Program Settings