Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p30870 Brassica napus
A09p02170 Brassica napus
A09p02180 Brassica napus
Aa31LG5G2380 Aethionema arabicum
Aa31LG8G1370 Aethionema arabicum
Aa31sc472G20 Aethionema arabicum
Aa31sc472G30 Aethionema arabicum
Actinidia00759 Actinidia chinensis
Actinidia00760 Actinidia chinensis
Actinidia00770 Actinidia chinensis
Actinidia00771 Actinidia chinensis
Actinidia09127 Actinidia chinensis
Actinidia24900 Actinidia chinensis
Actinidia24901 Actinidia chinensis
AL1084U10010 Arabidopsis lyrata
AL2G38120 Arabidopsis lyrata
AL6G50180 Arabidopsis lyrata
AL6G50220 Arabidopsis lyrata
AL6G50230 Arabidopsis lyrata
AL6G50250 Arabidopsis lyrata
AL6G50260 Arabidopsis lyrata
Aqoxy2G03370 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.97IXSS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E8A0WP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PW6FZP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SSYA5T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y8QVM3 Arachis hypogaea
AT4G02733 Arabidopsis thaliana
AT4G02735 Arabidopsis thaliana
AT4G02740 Arabidopsis thaliana
AT4G02760 Arabidopsis thaliana
AT4G08535 Arabidopsis thaliana
ATR0332G031 Amborella trichopoda
ATR0782G094 Amborella trichopoda
Atru.chr5.1458 Acer truncatum
BcaB01g02007 Brassica carinata
BcaB05g23891 Brassica carinata
BcaB07g33030 Brassica carinata
BcaC01g06733 Brassica carinata
BcaC01g06734 Brassica carinata
BcaC01g06735 Brassica carinata
BcaC04g24012 Brassica carinata
BolC3t16050H Brassica oleracea
BolC3t16051H Brassica oleracea
BolC3t16054H Brassica oleracea
BolC6t36333H Brassica oleracea
BolC6t36334H Brassica oleracea
BolC9t53154H Brassica oleracea
BolC9t53155H Brassica oleracea
BraA03t12264Z Brassica rapa
BraA03t13564Z Brassica rapa
BraA09t35865Z Brassica rapa
BraA09t35866Z Brassica rapa
C03p37590 Brassica napus
C03p37600 Brassica napus
C03p37610 Brassica napus
C03p37620 Brassica napus
C03p37640 Brassica napus
C06p11970 Brassica napus
C06p11990 Brassica napus
C09p02260 Brassica napus
CAN.G1549.7 Capsicum annuum
CANSAT25G1654 Cannabis sativa
CARHR251080 Cardamine hirsuta
CARHR251100 Cardamine hirsuta
CARHR251120 Cardamine hirsuta
CARHR251130 Cardamine hirsuta
Carub.0006s3430 Capsella rubella
Carub.0006s3431 Capsella rubella
Carub.0006s3432 Capsella rubella
Carub.0006s3435 Capsella rubella
Carub.0006s3436 Capsella rubella
Ca_08607_v3 Cicer arietinum L.
Ca_10811_v3 Cicer arietinum L.
CBR_g46206 Chara braunii
Cfa006156 Carpinus fangiana
Ciclev10019577m.g Citrus clementina
CiPaw.07G090900 Carya illinoinensis
ClCG09G007110 Citrullus lanatus
COL.COLO4_09077 Corchorus olitorius
Cpa.g.sc52.47 Carica papaya
Cpa.g.sc52.48 Carica papaya
CsaV3_7G028050 Cucumis sativus L.
CSS0013750 Camellia sinensis var. sinensis
CSS0049215 Camellia sinensis var. sinensis
DCAR_002728 Daucus carota
DCAR_012485 Daucus carota
Dinv32922 Davidia involucrata
Dinv34765 Davidia involucrata
Duzib133G0734 Durio zibethinus
ECA248G1795 Erigeron canadensis
Eucgr.H01469 Eucalyptus grandis
FAN15G2405 Fragaria x ananassa
FAN20G2449 Fragaria x ananassa
FAN24G3171 Fragaria x ananassa
FAN27G1242 Fragaria x ananassa
FvH4_2g23360 Fragaria vesca
Glyma.03G155100 Glycine max
Glyma.06G258700 Glycine max
Glyma.19G157300 Glycine max
Gohir.A08G186400 Gossypium hirsutum
Gohir.A11G123400 Gossypium hirsutum
Gohir.D08G204500 Gossypium hirsutum
Gohir.D11G128600 Gossypium hirsutum
Gorai.004G216500 Gossypium raimondii
Gorai.007G137600 Gossypium raimondii
GSVIVG01001160001 Vitis vinifera
HanXRQChr01g0003001 Helianthus annuus
HanXRQChr10g0281951 Helianthus annuus
HanXRQChr15g0466731 Helianthus annuus
Haze_04695 Corylus avellana
Hma1.2p1_1168F.1_g263140 Hydrangea macrophylla
Lalb_Chr06g0162961 Lupinus albus
Lj1A47G33 Lonicera japonica
Lj1g0003787 Lotus japonicus
Lj2A1170T17 Lonicera japonica
Lj2A1170T18 Lonicera japonica
Lj5g0015989 Lotus japonicus
Lsat_1_v5_gn_1_5801 Lactuca sativa
Lsat_1_v5_gn_4_100581 Lactuca sativa
Lsat_1_v5_gn_4_62701 Lactuca sativa
Lsat_1_v5_gn_4_80681 Lactuca sativa
Lsat_1_v5_gn_5_184661 Lactuca sativa
Lsat_1_v5_gn_7_8121 Lactuca sativa
Lsat_1_v5_gn_8_129341 Lactuca sativa
Lsat_1_v5_gn_8_56480 Lactuca sativa
Lsat_1_v5_gn_8_57021 Lactuca sativa
Lsat_1_v5_gn_9_3521 Lactuca sativa
Manes.05G077300 Manihot esculenta
MD03G1263100 Malus domestica
MD11G1283900 Malus domestica
Medtr4g095000 Medicago truncatula
Medtr7g094400 Medicago truncatula
Medtr7g095030 Medicago truncatula
MELO3C015825.2 Cucumis melo
MELO3C015827.2 Cucumis melo
Migut.D00308 Erythranthe guttata
Nitab4.5_0000759g0210 Nicotiana tabacum
Nitab4.5_0007361g0010 Nicotiana tabacum
Nitab4.5_0024519g0010 Nicotiana tabacum
Nn4g26293 Nelumbo nucifera
Oeu047871.2 Olea europaea
PGR119G1379 Punica granatum
Phvul.001G152400 Phaseolus vulgaris
Potri.002G051800 Populus trichocarpa
Potri.005G210500 Populus trichocarpa
Pp3c6_19750 Physcomitrium patens
Prupe.8G239400 Prunus persica
Psat3g063960 Pisum sativum
PSO210G1981 Papaver somniferum
PSO761G0144 Papaver somniferum
QL12p021373 Quercus lobata
RcHm_v2.0_Chr6g0290801 Rosa chinensis
Rhsim02G0147100 Rhododendron simsii
Rhsim13G0025900 Rhododendron simsii
Sabra05G0160700 Salix brachista
Sc05g0005620 Simmondsia chinensis
Sed0016197 Sechium edule
SEGI_05001 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00488 Striga asiatica
Sp6g02700 Schrenkiella parvula
Sp6g02720 Schrenkiella parvula
Sp6g02730 Schrenkiella parvula
Sp6g02760 Schrenkiella parvula
Sp6g02780 Schrenkiella parvula
TAR636G1714 Trochodendron aralioides
THA.LOC104801240 Tarenaya hassleriana
Thecc.01G277100 Theobroma cacao
Thhalv10015673m.g Eutrema salsugineum
Thhalv10028579m.g Eutrema salsugineum
Thhalv10029278m.g Eutrema salsugineum
Thhalv10029301m.g Eutrema salsugineum
Thhalv10029382m.g Eutrema salsugineum
Thhalv10029415m.g Eutrema salsugineum
TPR.G9912 Trifolium pratense
TWI23G0664 Tripterygium wilfordii
TWI59G0387 Tripterygium wilfordii
unitig_749.g13741 Utricularia gibba
vmacro02581 Vaccinium macrocarpon
VMungo1080G0763 Vigna mungo
VMungo1383G1292 Vigna mungo
VMungo1383G1837 Vigna mungo

User provided reference genes

Program Settings