Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p32320 Brassica napus
A06p44090 Brassica napus
Aa31LG2G8120 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2367 Anthoceros agrestis
Actinidia36612 Actinidia chinensis
Ah.09g234580 Amaranthus hybridus
Ah.14g087870 Amaranthus hybridus
AL5G10900 Arabidopsis lyrata
Aqoxy3G04068 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2L3ISV Arachis hypogaea
AT2G01770 Arabidopsis thaliana
ATR0118G024 Amborella trichopoda
Atru.chr11.837 Acer truncatum
Atru.chr11.843 Acer truncatum
Atru.chr11.846 Acer truncatum
Atru.chr11.849 Acer truncatum
AUR62012750 Chenopodium quinoa
AUR62021908 Chenopodium quinoa
BcaB05g24664 Brassica carinata
BcaB07g30374 Brassica carinata
BcaC03g17074 Brassica carinata
BcaC06g31278 Brassica carinata
BolC2t11071H Brassica oleracea
BraA02t08249Z Brassica rapa
BraA06t27283Z Brassica rapa
C02p49920 Brassica napus
CAN.G74.19 Capsicum annuum
CANSAT78G0734 Cannabis sativa
CANSAT78G1255 Cannabis sativa
CANSAT78G1947 Cannabis sativa
CARHR144350 Cardamine hirsuta
Carub.0005s0073 Capsella rubella
Ca_17254_v3 Cicer arietinum L.
Cc11_g06660 Coffea canephora
CDE05G1112 Ceratophyllum demersum
CDE05G1216 Ceratophyllum demersum
Cfa015046 Carpinus fangiana
Ciclev10016475m.g Citrus clementina
Ciclev10017583m.g Citrus clementina
CiPaw.06G054700 Carya illinoinensis
CiPaw.06G054800 Carya illinoinensis
ClCG01G006640 Citrullus lanatus
ClCG07G005420 Citrullus lanatus
COL.COLO4_27614 Corchorus olitorius
COL.COLO4_27615 Corchorus olitorius
Cpa.g.sc2.168 Carica papaya
CsaV3_5G014530 Cucumis sativus L.
CsaV3_5G027930 Cucumis sativus L.
CsaV3_5G027940 Cucumis sativus L.
CSS0024034 Camellia sinensis var. sinensis
CSS0047498 Camellia sinensis var. sinensis
DCAR_023568 Daucus carota
Dinv00922 Davidia involucrata
Dinv03968 Davidia involucrata
Dinv06119 Davidia involucrata
Dinv26370 Davidia involucrata
Duzib248G0263 Durio zibethinus
Duzib251G0065 Durio zibethinus
Duzib251G0134 Durio zibethinus
Duzib268G1244 Durio zibethinus
ECA234G4680 Erigeron canadensis
EL10Ac8g20121 Beta vulgaris
Eucgr.B02690 Eucalyptus grandis
Eucgr.B02691 Eucalyptus grandis
Eucgr.G02084 Eucalyptus grandis
Eucgr.L02831 Eucalyptus grandis
FAN07G0297 Fragaria x ananassa
FAN07G2428 Fragaria x ananassa
FAN12G0353 Fragaria x ananassa
FAN12G2011 Fragaria x ananassa
FAN17G0483 Fragaria x ananassa
FAN17G2298 Fragaria x ananassa
FAN22G0305 Fragaria x ananassa
FAN22G2109 Fragaria x ananassa
FvH4_4g33340 Fragaria vesca
Glyma.05G240600 Glycine max
Glyma.08G047500 Glycine max
Gohir.A13G027600 Gossypium hirsutum
Gohir.D13G026400 Gossypium hirsutum
Gorai.013G029700 Gossypium raimondii
GSVIVG01011628001 Vitis vinifera
GSVIVG01011629001 Vitis vinifera
HanXRQChr09g0251961 Helianthus annuus
HanXRQChr09g0270541 Helianthus annuus
HanXRQChr12g0383081 Helianthus annuus
HanXRQChr16g0527241 Helianthus annuus
HanXRQChr17g0565981 Helianthus annuus
Haze_10850 Corylus avellana
Haze_10851 Corylus avellana
Hma1.2p1_0234F.1_g098420 Hydrangea macrophylla
Hma1.2p1_0940F.1_g239510 Hydrangea macrophylla
Hma1.2p1_1538F.1_g289560 Hydrangea macrophylla
HPP92_023443 Vanilla planifolia
HPP92_023452 Vanilla planifolia
Hund23441 Selenicereus undatus
Lalb_Chr05g0222091 Lupinus albus
Lj3A863T39 Lonicera japonica
LjContig00081g0026703 Lotus japonicus
Lsat_1_v5_gn_4_23500 Lactuca sativa
Manes.15G136600 Manihot esculenta
Manes.17G085600 Manihot esculenta
Mapoly0116s0023 Marchantia polymorpha
MBI19_g09381_MAGBIO Magnolia biondii
MD13G1018700 Malus domestica
MD16G1016500 Malus domestica
MD16G1016600 Malus domestica
Medtr8g105790 Medicago truncatula
Medtr8g105810 Medicago truncatula
MELO3C005259.2 Cucumis melo
MELO3C005260.2 Cucumis melo
Migut.E00497 Erythranthe guttata
MSTRG.2118 Avicennia marina
Nitab4.5_0002414g0010 Nicotiana tabacum
Nitab4.5_0003619g0020 Nicotiana tabacum
Nn3g18415 Nelumbo nucifera
Nn3g18417 Nelumbo nucifera
Nn3g18418 Nelumbo nucifera
Nn4g24451 Nelumbo nucifera
Oeu006298.1 Olea europaea
Oeu043982.1 Olea europaea
Os04g0463400 Oryza sativa ssp. japonica
Os09g0396900 Oryza sativa ssp. japonica
Peaxi162Scf00337g00715 Petunia axillaris
PGR102G0637 Punica granatum
PGR142G2609 Punica granatum
PGSC0003DMG400029467 Solanum tuberosum
Phvul.002G322800 Phaseolus vulgaris
Phvul.002G322900 Phaseolus vulgaris
Phvul.002G323700 Phaseolus vulgaris
Potri.010G104100 Populus trichocarpa
Potri.010G104200 Populus trichocarpa
Pp3c2_34540 Physcomitrium patens
Prupe.1G335200 Prunus persica
Prupe.1G335300 Prunus persica
Psat7g007520 Pisum sativum
PSO339G4314 Papaver somniferum
PSO384G3089 Papaver somniferum
PSO675G2134 Papaver somniferum
PSO675G5697 Papaver somniferum
PSO732G0427 Papaver somniferum
PSO732G0533 Papaver somniferum
QL03p037712 Quercus lobata
QL03p037918 Quercus lobata
RcHm_v2.0_Chr4g0442571 Rosa chinensis
RcHm_v2.0_Chr4g0442581 Rosa chinensis
RcHm_v2.0_Chr4g0442611 Rosa chinensis
Rhsim09G0088200 Rhododendron simsii
Sabra10G0076600 Salix brachista
SalBow2G0350 Salvia bowleyana
Sed0007838 Sechium edule
Sed0010431 Sechium edule
Sed0023787 Sechium edule
SEGI_29045 Sequoiadendron giganteum
SEGI_33821 Sequoiadendron giganteum
SEGI_39927 Sequoiadendron giganteum
SGA_v2.0_scaffold23G10159 Striga asiatica
SHI04334 Sapria himalayana
SMO169G0175 Selaginella moellendorffii
Solyc04g008060.3 Solanum lycopersicum
Sopen04g003210 Solanum pennellii
Sp2g13230 Schrenkiella parvula
TAR629G0971 Trochodendron aralioides
THA.LOC104823632 Tarenaya hassleriana
Thecc.02G307900 Theobroma cacao
Thecc.02G308100 Theobroma cacao
Thecc.06G045600 Theobroma cacao
Thhalv10005591m.g Eutrema salsugineum
TPR.G19268 Trifolium pratense
TWI74G1086 Tripterygium wilfordii
unitig_22.g5605 Utricularia gibba
unitig_27.g25168 Utricularia gibba
unitig_29.g31879 Utricularia gibba
unitig_52.g17091 Utricularia gibba
unitig_8.g4013 Utricularia gibba
VMungo0251G0608 Vigna mungo
VMungo0251G2644 Vigna mungo
VMungo0251G2898 Vigna mungo
VMungo0540G0471 Vigna mungo
Zm00001eb099150 Zea mays
Zm00001eb099160 Zea mays
Zm00001eb312010 Zea mays
Zm00001eb424350 Zea mays

User provided reference genes

Program Settings