Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p27100 Brassica napus
Aa31LG5G9620 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5349 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5350 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.13 Anthoceros agrestis
Actinidia14723 Actinidia chinensis
Actinidia18178 Actinidia chinensis
Actinidia22787 Actinidia chinensis
Ah.10g034170 Amaranthus hybridus
AL4G18610 Arabidopsis lyrata
Aqoxy7G04027 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.A9ZF87 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DB7AVX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HFA82L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PBH5UM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QP0P3V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VVP2QU Arachis hypogaea
AT2G26170 Arabidopsis thaliana
ATR0789G177 Amborella trichopoda
Atru.chr3.967 Acer truncatum
Atru.chr7.1100 Acer truncatum
Atru.chr7.1101 Acer truncatum
AUR62009125 Chenopodium quinoa
AUR62039130 Chenopodium quinoa
BcaB01g03015 Brassica carinata
BcaC01g04895 Brassica carinata
BolC3t15593H Brassica oleracea
BraA03t11923Z Brassica rapa
C03p32550 Brassica napus
CAN.G20.2 Capsicum annuum
CANSAT25G1961 Cannabis sativa
CARHR114940 Cardamine hirsuta
Carub.0004s0602 Capsella rubella
Ca_13154_v3 Cicer arietinum L.
Ca_15823_v3 Cicer arietinum L.
Ca_15857_v3 Cicer arietinum L.
Ca_29587_v3 Cicer arietinum L.
CBR_g39355 Chara braunii
CBR_g4855 Chara braunii
CBR_g4856 Chara braunii
CBR_g4863 Chara braunii
CBR_g49050 Chara braunii
Cc08_g10820 Coffea canephora
CDE05G0916 Ceratophyllum demersum
CDE12G0296 Ceratophyllum demersum
Cfa017968 Carpinus fangiana
Cfa023990 Carpinus fangiana
Ciclev10007948m.g Citrus clementina
Ciclev10025311m.g Citrus clementina
CiPaw.15G037400 Carya illinoinensis
CiPaw.16G027700 Carya illinoinensis
ClCG05G017960 Citrullus lanatus
COL.COLO4_08752 Corchorus olitorius
Cpa.g.sc7.164 Carica papaya
Cre01.g054250 Chlamydomonas reinhardtii
Cre07.g340850 Chlamydomonas reinhardtii
Cre09.g396994 Chlamydomonas reinhardtii
Cre09.g397031 Chlamydomonas reinhardtii
Cre09.g397105 Chlamydomonas reinhardtii
Cre09.g397216 Chlamydomonas reinhardtii
Cre09.g397734 Chlamydomonas reinhardtii
Cre10.g427350 Chlamydomonas reinhardtii
Cre16.g648200 Chlamydomonas reinhardtii
CsaV3_4G035740 Cucumis sativus L.
CSS0010882 Camellia sinensis var. sinensis
CSS0022108 Camellia sinensis var. sinensis
CSS0037804 Camellia sinensis var. sinensis
DCAR_007732 Daucus carota
Dinv22883 Davidia involucrata
Dinv28000 Davidia involucrata
Dinv28001 Davidia involucrata
Duzib168G0901 Durio zibethinus
ECA233G0429 Erigeron canadensis
ECA233G1458 Erigeron canadensis
ECA233G5588 Erigeron canadensis
EL10Ac2g03833 Beta vulgaris
Eucgr.C00665 Eucalyptus grandis
Eucgr.C00666 Eucalyptus grandis
FAN15G2296 Fragaria x ananassa
FAN24G3339 Fragaria x ananassa
FAN24G3396 Fragaria x ananassa
FAN27G0642 Fragaria x ananassa
FvH4_2g31660 Fragaria vesca
FvH4_2g31680 Fragaria vesca
Glyma.04G052100 Glycine max
Glyma.06G052700 Glycine max
Glyma.14G096900 Glycine max
Glyma.17G227500 Glycine max
Gohir.A05G041200 Gossypium hirsutum
Gohir.D05G042900 Gossypium hirsutum
Gorai.009G044000 Gossypium raimondii
GSVIVG01035383001 Vitis vinifera
GSVIVG01035384001 Vitis vinifera
HanXRQChr07g0207181 Helianthus annuus
HanXRQChr15g0489511 Helianthus annuus
Haze_18163 Corylus avellana
Hma1.2p1_0801F.1_g220215 Hydrangea macrophylla
Hma1.2p1_2735F.1_g327680 Hydrangea macrophylla
Hma1.2p1_2973F.1_g331110 Hydrangea macrophylla
Hma1.2p1_3849F.1_g337750 Hydrangea macrophylla
Hund19442 Selenicereus undatus
Lalb_Chr23g0267821 Lupinus albus
Lj1g0022483 Lotus japonicus
Lj5g0006518 Lotus japonicus
Lj7A265T34 Lonicera japonica
Lsat_1_v5_gn_6_14580 Lactuca sativa
Manes.16G081600 Manihot esculenta
MBI04_g36909_MAGBIO Magnolia biondii
MD02G1142400 Malus domestica
MD08G1064200 Malus domestica
MD15G1057500 Malus domestica
MD15G1057600 Malus domestica
MD15G1255600 Malus domestica
MD15G1255800 Malus domestica
MD15G1256100 Malus domestica
Medtr1g015860 Medicago truncatula
Medtr3g104560 Medicago truncatula
MELO3C016879.2 Cucumis melo
Migut.A00123 Erythranthe guttata
Migut.A00238 Erythranthe guttata
Nitab4.5_0006852g0080 Nicotiana tabacum
Nn8g38808 Nelumbo nucifera
Oeu013996.1 Olea europaea
Oeu036326.1 Olea europaea
Os01g0700900 Oryza sativa ssp. japonica
Os01g0701400 Oryza sativa ssp. japonica
Os01g0701500 Oryza sativa ssp. japonica
Os02g0221900 Oryza sativa ssp. japonica
Os06g0565100 Oryza sativa ssp. japonica
Peaxi162Scf00327g00049 Petunia axillaris
PGR031G0962 Punica granatum
PGSC0003DMG400008222 Solanum tuberosum
PGSC0003DMG400040619 Solanum tuberosum
PGSC0003DMG400045527 Solanum tuberosum
Phvul.001G037100 Phaseolus vulgaris
Phvul.009G078400 Phaseolus vulgaris
Potri.006G226700 Populus trichocarpa
Potri.018G062100 Populus trichocarpa
Prupe.1G410000 Prunus persica
Prupe.1G410100 Prunus persica
Prupe.1G410300 Prunus persica
Psat5g036240 Pisum sativum
Psat5g036360 Pisum sativum
Psat6g021360 Pisum sativum
PSO063G0115 Papaver somniferum
PSO210G0597 Papaver somniferum
PSO210G3243 Papaver somniferum
PSO210G3545 Papaver somniferum
PSO210G6363 Papaver somniferum
PSO210G6906 Papaver somniferum
QL02p000940 Quercus lobata
RcHm_v2.0_Chr6g0311161 Rosa chinensis
Rhsim11G0043000 Rhododendron simsii
Sabra06G0175400 Salix brachista
SalBow2G2190 Salvia bowleyana
SalBow4G0514 Salvia bowleyana
Sc06g0000990 Simmondsia chinensis
Sed0009036 Sechium edule
SEGI_07489 Sequoiadendron giganteum
SEGI_39079 Sequoiadendron giganteum
SGA_v2.0_scaffold20G09215 Striga asiatica
SMO137G0369 Selaginella moellendorffii
Solyc08g062950.4 Solanum lycopersicum
Sopen08g018500 Solanum pennellii
Sp4g06200 Schrenkiella parvula
TAR624G0243 Trochodendron aralioides
THA.LOC104803723 Tarenaya hassleriana
THA.LOC104804441 Tarenaya hassleriana
Thecc.09G056500 Theobroma cacao
Thhalv10001960m.g Eutrema salsugineum
TPR.G13077 Trifolium pratense
TPR.G2717 Trifolium pratense
TPR.G3587 Trifolium pratense
TWI34G0336 Tripterygium wilfordii
TWI34G0518 Tripterygium wilfordii
unitig_748.g7528 Utricularia gibba
vmacro00129 Vaccinium macrocarpon
VMungo0647G2359 Vigna mungo
VMungo1309G1608 Vigna mungo
Zm00001eb123090 Zea mays
Zm00001eb133980 Zea mays
Zm00001eb205110 Zea mays
Zm00001eb384100 Zea mays

User provided reference genes

Program Settings