Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p33120 Brassica napus
A06p10370 Brassica napus
A09p62250 Brassica napus
Aa31LG1G680 Aethionema arabicum
Aa31LG2G7460 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.860 Anthoceros agrestis
Actinidia08219 Actinidia chinensis
Actinidia19859 Actinidia chinensis
Ah.03g135330 Amaranthus hybridus
AL1G26250 Arabidopsis lyrata
AL5G12020 Arabidopsis lyrata
Aqoxy3G03325 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.23SP7E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2UK2LN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.46601I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5Y78DL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6BI6KA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9FD3VR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R6Z027 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V4GG8W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VPW534 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XG19R5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XR1P03 Arachis hypogaea
AT1G14360 Arabidopsis thaliana
AT2G02810 Arabidopsis thaliana
ATR0564G448 Amborella trichopoda
Atru.chr11.1836 Acer truncatum
AUR62005743 Chenopodium quinoa
AUR62028815 Chenopodium quinoa
BcaB02g06486 Brassica carinata
BcaB07g30322 Brassica carinata
BcaB08g34391 Brassica carinata
BcaC03g17169 Brassica carinata
BcaC05g25335 Brassica carinata
BolC2t11183H Brassica oleracea
BolC5t29969H Brassica oleracea
BolC8t52131H Brassica oleracea
BolC9t56267H Brassica oleracea
BraA02t08335Z Brassica rapa
BraA06t24218Z Brassica rapa
BraA09t41588Z Brassica rapa
C02p50920 Brassica napus
C05p12160 Brassica napus
C08p45770 Brassica napus
C09p34230 Brassica napus
CAN.G38.20 Capsicum annuum
CAN.G512.10 Capsicum annuum
CANSAT64G0696 Cannabis sativa
CARHR014800 Cardamine hirsuta
CARHR145250 Cardamine hirsuta
Carub.0001s1406 Capsella rubella
Carub.0005s0172 Capsella rubella
Ca_04758_v3 Cicer arietinum L.
CBR_g44614 Chara braunii
Cc11_g13340 Coffea canephora
CDE04G2861 Ceratophyllum demersum
CDE07G0123 Ceratophyllum demersum
Cfa009009 Carpinus fangiana
Cfa026007 Carpinus fangiana
Ciclev10032069m.g Citrus clementina
CiPaw.05G138300 Carya illinoinensis
CiPaw.06G082300 Carya illinoinensis
ClCG05G024480 Citrullus lanatus
COL.COLO4_22969 Corchorus olitorius
Cpa.g.sc183.26 Carica papaya
Cre01.g032050 Chlamydomonas reinhardtii
CsaV3_5G032480 Cucumis sativus L.
CSS0014710 Camellia sinensis var. sinensis
CSS0016772 Camellia sinensis var. sinensis
CSS0030862 Camellia sinensis var. sinensis
CSS0033561 Camellia sinensis var. sinensis
DCAR_017796 Daucus carota
DCAR_027398 Daucus carota
Dinv24971 Davidia involucrata
Dinv34176 Davidia involucrata
Duzib251G0232 Durio zibethinus
Duzib268G0480 Durio zibethinus
ECA234G1012 Erigeron canadensis
ECA246G4538 Erigeron canadensis
EL10Ac6g13171 Beta vulgaris
Eucgr.B03416 Eucalyptus grandis
FAN07G0095 Fragaria x ananassa
FAN12G3834 Fragaria x ananassa
FAN17G0203 Fragaria x ananassa
FAN22G2192 Fragaria x ananassa
FvH4_4g31670 Fragaria vesca
Glyma.01G044200 Glycine max
Glyma.02G019400 Glycine max
Glyma.18G123732 Glycine max
Gohir.A13G072400 Gossypium hirsutum
Gohir.D13G072500 Gossypium hirsutum
Gorai.013G083200 Gossypium raimondii
GSVIVG01020040001 Vitis vinifera
HanXRQChr17g0545081 Helianthus annuus
HanXRQChr17g0570491 Helianthus annuus
Haze_12038 Corylus avellana
HPP92_009104 Vanilla planifolia
Hund05900 Selenicereus undatus
Hund25260 Selenicereus undatus
Lalb_Chr10g0098081 Lupinus albus
Lalb_Chr17g0340481 Lupinus albus
Lj2g0024025 Lotus japonicus
Lj3A1041T80 Lonicera japonica
Lj6A792T38 Lonicera japonica
Lsat_1_v5_gn_4_8641 Lactuca sativa
Lsat_1_v5_gn_8_53841 Lactuca sativa
Manes.01G188100 Manihot esculenta
Manes.05G101600 Manihot esculenta
Mapoly0006s0029 Marchantia polymorpha
MBI02_g05733_MAGBIO Magnolia biondii
MBI05_g00393_MAGBIO Magnolia biondii
MCO11G498 Micromonas commoda
MD07G1011400 Malus domestica
MD13G1076000 Malus domestica
MD16G1076200 Malus domestica
Medtr5g038900 Medicago truncatula
MELO3C012076.2 Cucumis melo
Migut.L01323 Erythranthe guttata
MSTRG.682 Avicennia marina
Nitab4.5_0000141g0330 Nicotiana tabacum
Nitab4.5_0003062g0080 Nicotiana tabacum
Nitab4.5_0007777g0010 Nicotiana tabacum
Nitab4.5_0012600g0020 Nicotiana tabacum
Nn3g17165 Nelumbo nucifera
Nn4g23086 Nelumbo nucifera
Oeu000625.2 Olea europaea
Oeu045419.1 Olea europaea
Os06g0593100 Oryza sativa ssp. japonica
Peaxi162Scf00026g02810 Petunia axillaris
Peaxi162Scf01030g00013 Petunia axillaris
PGR102G1616 Punica granatum
PGSC0003DMG400000862 Solanum tuberosum
PGSC0003DMG400025616 Solanum tuberosum
Phvul.002G089000 Phaseolus vulgaris
Potri.006G110500 Populus trichocarpa
Potri.016G139100 Populus trichocarpa
Pp3c11_9530 Physcomitrium patens
Pp3c2_15920 Physcomitrium patens
Pp3c2_31960 Physcomitrium patens
PRCOL_00006449 Prasinoderma coloniale
Prupe.1G270800 Prunus persica
Psat2g121920 Pisum sativum
Psat4g142720 Pisum sativum
Psat4g142800 Pisum sativum
PSO478G2937 Papaver somniferum
PSO591G0079 Papaver somniferum
PSO832G3994 Papaver somniferum
QL03p065037 Quercus lobata
RcHm_v2.0_Chr4g0440181 Rosa chinensis
Rhsim12G0060900 Rhododendron simsii
Sabra04G0155100 Salix brachista
SalBow2G2485 Salvia bowleyana
SalBow2G2925 Salvia bowleyana
Sc11g0001750 Simmondsia chinensis
Sed0017884 Sechium edule
SEGI_25531 Sequoiadendron giganteum
SGA_v2.0_scaffold302G47843 Striga asiatica
SGA_v2.0_scaffold53G19437 Striga asiatica
SMO165G0026 Selaginella moellendorffii
Solyc01g010650.3 Solanum lycopersicum
Solyc05g007150.4 Solanum lycopersicum
Sopen01g006280 Solanum pennellii
Sopen05g003110 Solanum pennellii
Sp1g12730 Schrenkiella parvula
Sp2g13910 Schrenkiella parvula
TAR374G1722 Trochodendron aralioides
TAR629G2331 Trochodendron aralioides
THA.LOC104805144 Tarenaya hassleriana
THA.LOC104824085 Tarenaya hassleriana
Thecc.02G352000 Theobroma cacao
Thhalv10004564m.g Eutrema salsugineum
Thhalv10008161m.g Eutrema salsugineum
TPR.G4021 Trifolium pratense
TWI23G0896 Tripterygium wilfordii
unitig_26.g10312 Utricularia gibba
vmacro09253 Vaccinium macrocarpon
vmacro17528 Vaccinium macrocarpon
vmacro23353 Vaccinium macrocarpon
VMungo1215G1164 Vigna mungo
Zm00001eb277110 Zea mays
Zm00001eb277140 Zea mays
Zm00001eb277180 Zea mays
Zm00001eb386020 Zea mays

User provided reference genes

Program Settings