Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p02560 Brassica napus
A03p64110 Brassica napus
A09p11700 Brassica napus
Aa31LG6G13100 Aethionema arabicum
Aa31LG8G15240 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4858 Anthoceros agrestis
Actinidia23001 Actinidia chinensis
Actinidia26076 Actinidia chinensis
Ah.02g124630 Amaranthus hybridus
Ah.03g141600 Amaranthus hybridus
AL3G51250 Arabidopsis lyrata
AL7G14860 Arabidopsis lyrata
Aqoxy6G02377 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5Y5RJ5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BM4PI5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IX4CF1 Arachis hypogaea
AT2G18080 Arabidopsis thaliana
AT4G36190 Arabidopsis thaliana
AT4G36195 Arabidopsis thaliana
ATR0149G013 Amborella trichopoda
ATR0705G198 Amborella trichopoda
Atru.chr3.771 Acer truncatum
AUR62007654 Chenopodium quinoa
AUR62043233 Chenopodium quinoa
BcaB07g31688 Brassica carinata
BcaC04g22932 Brassica carinata
BcaNung00750 Brassica carinata
BcaNung00751 Brassica carinata
BcaNung03015 Brassica carinata
BcaNung04789 Brassica carinata
BcaNung04791 Brassica carinata
BolC1t00264H Brassica oleracea
BolC7t46582H Brassica oleracea
BolC9t54265H Brassica oleracea
BraA01t00242Z Brassica rapa
BraA03t15476Z Brassica rapa
BraA09t36815Z Brassica rapa
C01p02740 Brassica napus
C07p61590 Brassica napus
C09p13760 Brassica napus
CAN.G785.6 Capsicum annuum
CAN.G785.7 Capsicum annuum
CAN.G825.39 Capsicum annuum
CANSAT01G0314 Cannabis sativa
CANSAT01G0600 Cannabis sativa
CARHR108560 Cardamine hirsuta
CARHR244600 Cardamine hirsuta
Carub.0003s3221 Capsella rubella
Carub.0007s0404 Capsella rubella
Ca_22363_v3 Cicer arietinum L.
Ca_24899_v3 Cicer arietinum L.
Cc07_g10460 Coffea canephora
CDE09G1412 Ceratophyllum demersum
Cfa006947 Carpinus fangiana
Cfa025217 Carpinus fangiana
Ciclev10025467m.g Citrus clementina
CiPaw.07G056300 Carya illinoinensis
CiPaw.08G135200 Carya illinoinensis
ClCG07G008330 Citrullus lanatus
COL.COLO4_21956 Corchorus olitorius
Cpa.g.sc6.218 Carica papaya
CsaV3_4G005800 Cucumis sativus L.
CSS0017089 Camellia sinensis var. sinensis
CSS0028269 Camellia sinensis var. sinensis
DCAR_025992 Daucus carota
Dinv40062 Davidia involucrata
Duzib147G1231 Durio zibethinus
Duzib187G0337 Durio zibethinus
ECA238G4346 Erigeron canadensis
ECA246G0901 Erigeron canadensis
EL10As8g23845 Beta vulgaris
Eucgr.J02399 Eucalyptus grandis
FAN19G1040 Fragaria x ananassa
FAN23G1382 Fragaria x ananassa
FAN26G1155 Fragaria x ananassa
FAN28G2406 Fragaria x ananassa
FvH4_1g12120 Fragaria vesca
Glyma.02G050501 Glycine max
Glyma.16G130700 Glycine max
Glyma.16G130900 Glycine max
Gohir.A11G177601 Gossypium hirsutum
Gohir.A11G177800 Gossypium hirsutum
Gohir.D11G185400 Gossypium hirsutum
Gohir.D11G185500 Gossypium hirsutum
Gorai.007G197000 Gossypium raimondii
Gorai.007G197100 Gossypium raimondii
GSVIVG01018819001 Vitis vinifera
HanXRQChr01g0018111 Helianthus annuus
HanXRQChr14g0436841 Helianthus annuus
HanXRQChr14g0441661 Helianthus annuus
HanXRQChr16g0531091 Helianthus annuus
Haze_03805 Corylus avellana
Hma1.2p1_0743F.1_g211480 Hydrangea macrophylla
HPP92_020998 Vanilla planifolia
HPP92_021024 Vanilla planifolia
Hund14033 Selenicereus undatus
Hund16478 Selenicereus undatus
Lalb_Chr05g0229921 Lupinus albus
Lalb_Chr09g0321901 Lupinus albus
Lalb_Chr09g0321911 Lupinus albus
Lj2A472G31 Lonicera japonica
Lj2A472T36 Lonicera japonica
Lj2C464T1 Lonicera japonica
Lj2g0008626 Lotus japonicus
Lj4g0017051 Lotus japonicus
Lsat_1_v5_gn_2_78501 Lactuca sativa
Lsat_1_v5_gn_3_73741 Lactuca sativa
Manes.01G143200 Manihot esculenta
Manes.02G101700 Manihot esculenta
Mapoly0040s0090 Marchantia polymorpha
MD02G1110800 Malus domestica
MD15G1248500 Malus domestica
MD15G1248600 Malus domestica
MD15G1248700 Malus domestica
Medtr5g021530 Medicago truncatula
Medtr8g076210 Medicago truncatula
MELO3C016371.2 Cucumis melo
Migut.H02478 Erythranthe guttata
MSTRG.23285 Avicennia marina
Nitab4.5_0001912g0010 Nicotiana tabacum
Nitab4.5_0005814g0030 Nicotiana tabacum
Nn5g29227 Nelumbo nucifera
Os10g0511400 Oryza sativa ssp. japonica
Os10g0511600 Oryza sativa ssp. japonica
Peaxi162Scf00010g00516 Petunia axillaris
PGR102G0875 Punica granatum
Phvul.003G259700 Phaseolus vulgaris
Phvul.003G260000 Phaseolus vulgaris
Potri.007G015300 Populus trichocarpa
Potri.007G015400 Populus trichocarpa
Pp3c21_22560 Physcomitrium patens
Prupe.7G165600 Prunus persica
Psat2g155880 Pisum sativum
Psat4g097480 Pisum sativum
Psat6g097480 Pisum sativum
Psat7g108040 Pisum sativum
PSO541G5535 Papaver somniferum
PSO675G4130 Papaver somniferum
QL06p033947 Quercus lobata
RcHm_v2.0_Chr2g0099781 Rosa chinensis
Rhsim10G0214200 Rhododendron simsii
Sabra07G0012300 Salix brachista
Sabra07G0012400 Salix brachista
SalBow8G1034 Salvia bowleyana
Sc03g0003480 Simmondsia chinensis
Sed0002051 Sechium edule
Sed0009086 Sechium edule
Sed0025104 Sechium edule
SEGI_08580 Sequoiadendron giganteum
SEGI_24629 Sequoiadendron giganteum
SEGI_28982 Sequoiadendron giganteum
SEGI_32240 Sequoiadendron giganteum
SGA_v2.0_scaffold2G01250 Striga asiatica
SMO172G0049 Selaginella moellendorffii
SMO172G0148 Selaginella moellendorffii
SMO198G0037 Selaginella moellendorffii
SMO201G0038 Selaginella moellendorffii
SMO201G0083 Selaginella moellendorffii
SMO201G0189 Selaginella moellendorffii
SMO230G0078 Selaginella moellendorffii
SMO268G0003 Selaginella moellendorffii
SMO268G0007 Selaginella moellendorffii
SMO356G0195 Selaginella moellendorffii
Solyc03g033620.3 Solanum lycopersicum
Sopen03g006410 Solanum pennellii
Sp3g31510 Schrenkiella parvula
Sp7g33940 Schrenkiella parvula
TAR376G0185 Trochodendron aralioides
THA.LOC104804255 Tarenaya hassleriana
THA.LOC104807484 Tarenaya hassleriana
Thecc.01G022600 Theobroma cacao
Thhalv10022659m.g Eutrema salsugineum
Thhalv10025043m.g Eutrema salsugineum
TPR.G2383 Trifolium pratense
TPR.G30053 Trifolium pratense
TPR.G30059 Trifolium pratense
TPR.G36220 Trifolium pratense
TWI09G0133 Tripterygium wilfordii
TWI73G1264 Tripterygium wilfordii
unitig_60.g25535 Utricularia gibba
vmacro21907 Vaccinium macrocarpon
Zm00001eb043730 Zea mays
Zm00001eb220420 Zea mays

User provided reference genes

Program Settings