Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p34930 Brassica napus
A03p41410 Brassica napus
A03p41420 Brassica napus
A05p29300 Brassica napus
A06p03260 Brassica napus
Aa31LG8G6590 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.797 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4140 Anthoceros agrestis
Actinidia04080 Actinidia chinensis
Ah.01g001630 Amaranthus hybridus
AL3G33330 Arabidopsis lyrata
Aqoxy3G04278 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.G65HTE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J2YHHP Arachis hypogaea
AT3G19820 Arabidopsis thaliana
ATR0618G344 Amborella trichopoda
Atru.chr11.1231 Acer truncatum
Atru.chr11.1319 Acer truncatum
AUR62014967 Chenopodium quinoa
AUR62015201 Chenopodium quinoa
AUR62017664 Chenopodium quinoa
AUR62018172 Chenopodium quinoa
BcaB04g19062 Brassica carinata
BcaB06g26051 Brassica carinata
BcaC01g03602 Brassica carinata
BcaC05g28402 Brassica carinata
BcaC08g43207 Brassica carinata
BcaC08g43211 Brassica carinata
BolC1t04399H Brassica oleracea
BolC3t17355H Brassica oleracea
BolC3t17356H Brassica oleracea
BolC3t17357H Brassica oleracea
BolC5t33208H Brassica oleracea
BolC6t35639H Brassica oleracea
BolC6t35641H Brassica oleracea
BraA01t03576Z Brassica rapa
BraA03t13295Z Brassica rapa
BraA05t21813Z Brassica rapa
BraA06t23537Z Brassica rapa
C01p44340 Brassica napus
C03p50670 Brassica napus
C03p50680 Brassica napus
C03p50690 Brassica napus
C03p50700 Brassica napus
C05p44820 Brassica napus
C06p05290 Brassica napus
C06p05320 Brassica napus
C06p05360 Brassica napus
CAN.G1362.14 Capsicum annuum
CAN.G675.20 Capsicum annuum
CAN.G79.46 Capsicum annuum
CANSAT78G1874 Cannabis sativa
CARHR095330 Cardamine hirsuta
Carub.0003s1970 Capsella rubella
Ca_03035_v3 Cicer arietinum L.
CBR_g45591 Chara braunii
Cc09_g06490 Coffea canephora
CDE05G1908 Ceratophyllum demersum
CDE05G2073 Ceratophyllum demersum
CDE05G2099 Ceratophyllum demersum
Cfa023151 Carpinus fangiana
Cfa024211 Carpinus fangiana
Ciclev10030984m.g Citrus clementina
CiPaw.06G057600 Carya illinoinensis
ClCG07G016390 Citrullus lanatus
ClCG09G004610 Citrullus lanatus
COL.COLO4_27669 Corchorus olitorius
CsaV3_4G009240 Cucumis sativus L.
CsaV3_7G030530 Cucumis sativus L.
CSS0038233 Camellia sinensis var. sinensis
DCAR_002565 Daucus carota
DCAR_030405 Daucus carota
Dinv17604 Davidia involucrata
Duzib248G0532 Durio zibethinus
ECA233G5967 Erigeron canadensis
ECA234G2331 Erigeron canadensis
EL10Ac9g22920 Beta vulgaris
Eucgr.J00851 Eucalyptus grandis
FAN07G1289 Fragaria x ananassa
FAN12G0530 Fragaria x ananassa
FAN17G2175 Fragaria x ananassa
FvH4_4g36730 Fragaria vesca
Glyma.11G103500 Glycine max
Glyma.12G028300 Glycine max
Gohir.A13G026100 Gossypium hirsutum
Gohir.D13G024700 Gossypium hirsutum
Gorai.005G150900 Gossypium raimondii
Gorai.013G027900 Gossypium raimondii
GSVIVG01002973001 Vitis vinifera
GSVIVG01010184001 Vitis vinifera
GSVIVG01028580001 Vitis vinifera
GSVIVG01033182001 Vitis vinifera
HanXRQChr01g0028571 Helianthus annuus
HanXRQChr08g0230901 Helianthus annuus
HanXRQChr13g0388101 Helianthus annuus
HanXRQChr15g0483641 Helianthus annuus
Haze_11725 Corylus avellana
Hund24279 Selenicereus undatus
Lalb_Chr01g0001531 Lupinus albus
Lalb_Chr03g0024881 Lupinus albus
Lj3g0022719 Lotus japonicus
Lj6A722T93 Lonicera japonica
Lj6g0014800 Lotus japonicus
Lj6g0026630 Lotus japonicus
Lsat_1_v5_gn_3_32901 Lactuca sativa
Lsat_1_v5_gn_4_26521 Lactuca sativa
Lsat_1_v5_gn_8_32421 Lactuca sativa
Manes.03G081200 Manihot esculenta
Mapoly0153s0024 Marchantia polymorpha
Mapoly0190s0010 Marchantia polymorpha
MBI03_g24012_MAGBIO Magnolia biondii
MD13G1007700 Malus domestica
MD16G1000400 Malus domestica
Medtr4g074350 Medicago truncatula
MELO3C022613.2 Cucumis melo
MELO3C023603.2 Cucumis melo
Migut.M01947 Erythranthe guttata
MSTRG.16322 Avicennia marina
Nitab4.5_0000265g0030 Nicotiana tabacum
Nitab4.5_0000876g0110 Nicotiana tabacum
Nitab4.5_0001219g0170 Nicotiana tabacum
Nitab4.5_0008761g0020 Nicotiana tabacum
Nitab4.5_0012697g0010 Nicotiana tabacum
Nn4g24924 Nelumbo nucifera
Oeu008711.1 Olea europaea
Os10g0397400 Oryza sativa ssp. japonica
Peaxi162Scf00312g00221 Petunia axillaris
Peaxi162Scf00695g00218 Petunia axillaris
Peaxi162Scf00833g00024 Petunia axillaris
Peaxi162Scf01123g00017 Petunia axillaris
PGR004G0624 Punica granatum
PGSC0003DMG400004305 Solanum tuberosum
PGSC0003DMG400011801 Solanum tuberosum
PGSC0003DMG400021142 Solanum tuberosum
Phvul.011G031700 Phaseolus vulgaris
Potri.008G084800 Populus trichocarpa
Potri.010G170000 Populus trichocarpa
Pp3c11_26120 Physcomitrium patens
Pp3c7_650 Physcomitrium patens
Prupe.1G345300 Prunus persica
Psat7g174000 Pisum sativum
PSO017G4886 Papaver somniferum
PSO478G4461 Papaver somniferum
QL03p043582 Quercus lobata
RcHm_v2.0_Chr4g0446441 Rosa chinensis
Rhsim09G0073400 Rhododendron simsii
Rhsim09G0073500 Rhododendron simsii
Sabra08G0063000 Salix brachista
Sabra10G0129800 Salix brachista
SalBow2G0375 Salvia bowleyana
SalBow8G3862 Salvia bowleyana
Sc06g0007850 Simmondsia chinensis
Sed0007506 Sechium edule
Sed0012416 Sechium edule
SEGI_20352 Sequoiadendron giganteum
SEGI_38803 Sequoiadendron giganteum
SGA_v2.0_scaffold223G42894 Striga asiatica
SMO347G0448 Selaginella moellendorffii
SMO367G0245 Selaginella moellendorffii
Solyc02g030170.4 Solanum lycopersicum
Solyc02g069490.4 Solanum lycopersicum
Sopen02g009490 Solanum pennellii
Sopen02g018630 Solanum pennellii
Sp1g37100 Schrenkiella parvula
Sp3g17830 Schrenkiella parvula
TAR035G0003 Trochodendron aralioides
TAR629G2113 Trochodendron aralioides
THA.LOC104804923 Tarenaya hassleriana
THA.LOC104815230 Tarenaya hassleriana
Thecc.02G311500 Theobroma cacao
Thhalv10012112m.g Eutrema salsugineum
Thhalv10020412m.g Eutrema salsugineum
TPR.G21559 Trifolium pratense
TWI74G0502 Tripterygium wilfordii
TWI77G0069 Tripterygium wilfordii
unitig_748.g7356 Utricularia gibba
vmacro00468 Vaccinium macrocarpon
vmacro10902 Vaccinium macrocarpon
vmacro10903 Vaccinium macrocarpon
VMungo1127G1615 Vigna mungo
Zm00001eb190720 Zea mays
Zm00001eb190730 Zea mays
Zm00001eb228910 Zea mays

User provided reference genes

Program Settings