Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p07290 Brassica napus
A03p60400 Brassica napus
A08p19030 Brassica napus
Aa31LG2G19490 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2031 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2032 Anthoceros agrestis
Actinidia06274 Actinidia chinensis
Actinidia06930 Actinidia chinensis
Actinidia16351 Actinidia chinensis
Actinidia19439 Actinidia chinensis
Ah.05g171640 Amaranthus hybridus
AL7G21200 Arabidopsis lyrata
Aqoxy6G01356 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.F7MMZ3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IE4AJN Arachis hypogaea
AT4G30890 Arabidopsis thaliana
ATR0721G058 Amborella trichopoda
Atru.chr11.2505 Acer truncatum
AUR62014380 Chenopodium quinoa
AUR62019122 Chenopodium quinoa
BcaB03g12665 Brassica carinata
BcaC01g01133 Brassica carinata
BcaC09g51876 Brassica carinata
BcaNung02733 Brassica carinata
BcaNung03431 Brassica carinata
BolC1t00794H Brassica oleracea
BolC3t21154H Brassica oleracea
BolC7t46285H Brassica oleracea
BraA01t00678Z Brassica rapa
BraA03t15080Z Brassica rapa
BraA08t33864Z Brassica rapa
C01p08050 Brassica napus
C03p88460 Brassica napus
C07p58270 Brassica napus
CAN.G633.2 Capsicum annuum
CANSAT80G1378 Cannabis sativa
CARHR238790 Cardamine hirsuta
Carub.0007s0965 Capsella rubella
Ca_00245_v3 Cicer arietinum L.
CBR_g66808 Chara braunii
Cc01_g06210 Coffea canephora
Cc02_g29350 Coffea canephora
CDE02G2263 Ceratophyllum demersum
CDE09G1021 Ceratophyllum demersum
Cfa010842 Carpinus fangiana
Cfa024126 Carpinus fangiana
Ciclev10031129m.g Citrus clementina
CiPaw.14G005400 Carya illinoinensis
ClCG02G013920 Citrullus lanatus
COL.COLO4_25844 Corchorus olitorius
Cpa.g.sc197.14 Carica papaya
Cre05.g234850 Chlamydomonas reinhardtii
CsaV3_5G006240 Cucumis sativus L.
CSS0013997 Camellia sinensis var. sinensis
CSS0036530 Camellia sinensis var. sinensis
CSS0045062 Camellia sinensis var. sinensis
DCAR_002120 Daucus carota
DCAR_031617 Daucus carota
Dinv00615 Davidia involucrata
Dinv00616 Davidia involucrata
Dinv04593 Davidia involucrata
Dinv22154 Davidia involucrata
Dinv32058 Davidia involucrata
Dinv36216 Davidia involucrata
Dinv39690 Davidia involucrata
Duzib106G0584 Durio zibethinus
Duzib114G0793 Durio zibethinus
ECA233G1032 Erigeron canadensis
ECA233G2787 Erigeron canadensis
EL10Ac1g00474 Beta vulgaris
Eucgr.G03263 Eucalyptus grandis
FAN01G0886 Fragaria x ananassa
FAN06G3050 Fragaria x ananassa
FAN10G1046 Fragaria x ananassa
FvH4_7g02050 Fragaria vesca
Glyma.09G225200 Glycine max
Glyma.12G011800 Glycine max
Gohir.A06G159000 Gossypium hirsutum
Gohir.D06G164900 Gossypium hirsutum
Gorai.010G192300 Gossypium raimondii
GSVIVG01000859001 Vitis vinifera
HanXRQChr01g0020841 Helianthus annuus
HanXRQChr02g0051501 Helianthus annuus
HanXRQChr13g0401471 Helianthus annuus
Haze_03108 Corylus avellana
Hma1.2p1_1200F.1_g266540 Hydrangea macrophylla
Hma1.2p1_1694F.1_g298010 Hydrangea macrophylla
HPP92_025001 Vanilla planifolia
Hund18010 Selenicereus undatus
Lalb_Chr01g0000591 Lupinus albus
Lalb_Chr01g0000601 Lupinus albus
Lalb_Chr19g0140171 Lupinus albus
Lj1A317T43 Lonicera japonica
Lj1A317T44 Lonicera japonica
Lj3g0020763 Lotus japonicus
Lj7C578T6 Lonicera japonica
Lsat_1_v5_gn_1_98220 Lactuca sativa
Lsat_1_v5_gn_4_28840 Lactuca sativa
Lsat_1_v5_gn_6_26100 Lactuca sativa
Manes.04G163700 Manihot esculenta
Manes.11G002300 Manihot esculenta
Mapoly0004s0306 Marchantia polymorpha
MapolyY_A0032 Marchantia polymorpha
MBI16_g10269_MAGBIO Magnolia biondii
MD02G1296600 Malus domestica
MD02G1296700 Malus domestica
MD07G1027400 Malus domestica
Medtr2g060050 Medicago truncatula
MELO3C011731.2 Cucumis melo
Migut.N01820 Erythranthe guttata
Migut.N02350 Erythranthe guttata
Migut.O00905 Erythranthe guttata
MSTRG.12454 Avicennia marina
Nitab4.5_0000316g0220 Nicotiana tabacum
Nitab4.5_0001543g0030 Nicotiana tabacum
Nitab4.5_0002726g0070 Nicotiana tabacum
Nitab4.5_0006878g0040 Nicotiana tabacum
Nn2g15064 Nelumbo nucifera
Nn3g16658 Nelumbo nucifera
Oeu003914.1 Olea europaea
Oeu019155.3 Olea europaea
Oeu061300.1 Olea europaea
Oeu061301.1 Olea europaea
Oeu062077.1 Olea europaea
Os07g0661300 Oryza sativa ssp. japonica
Peaxi162Scf00004g03811 Petunia axillaris
Peaxi162Scf00087g00128 Petunia axillaris
PGR031G2286 Punica granatum
PGSC0003DMG400012740 Solanum tuberosum
PGSC0003DMG400012741 Solanum tuberosum
PGSC0003DMG400012743 Solanum tuberosum
PGSC0003DMG400012744 Solanum tuberosum
PGSC0003DMG400013186 Solanum tuberosum
Phvul.011G014600 Phaseolus vulgaris
Potri.003G202800 Populus trichocarpa
Pp3c16_4180 Physcomitrium patens
PRCOL_00001310 Prasinoderma coloniale
Prupe.2G027700 Prunus persica
Prupe.3G154500 Prunus persica
Prupe.6G151000 Prunus persica
Psat7g109680 Pisum sativum
Psat7g201120 Pisum sativum
PSO339G4517 Papaver somniferum
PSO384G3184 Papaver somniferum
PSO447G0106 Papaver somniferum
QL04p013175 Quercus lobata
RcHm_v2.0_Chr1g0319451 Rosa chinensis
RcHm_v2.0_Chr5g0026451 Rosa chinensis
Rhsim07G0061800 Rhododendron simsii
Sabra01G0017100 Salix brachista
Sabra03G0149800 Salix brachista
SalBow6G0244 Salvia bowleyana
SalBow6G4543 Salvia bowleyana
Sc10g0004200 Simmondsia chinensis
Sc14g0005810 Simmondsia chinensis
Sed0002392 Sechium edule
Sed0004278 Sechium edule
SEGI_11797 Sequoiadendron giganteum
SGA_v2.0_scaffold3339G54319 Striga asiatica
SGA_v2.0_scaffold354G49741 Striga asiatica
SGA_v2.0_scaffold42G16081 Striga asiatica
SGA_v2.0_scaffold42G16084 Striga asiatica
SMO165G0072 Selaginella moellendorffii
Solyc01g068240.3 Solanum lycopersicum
Solyc11g065210.3 Solanum lycopersicum
Sopen01g030170 Solanum pennellii
Sopen11g024920 Solanum pennellii
Sp7g28760 Schrenkiella parvula
TAR633G1887 Trochodendron aralioides
TAR636G2085 Trochodendron aralioides
THA.LOC104819115 Tarenaya hassleriana
THA.LOC104826715 Tarenaya hassleriana
Thecc.10G005200 Theobroma cacao
Thhalv10025311m.g Eutrema salsugineum
TPR.G20248 Trifolium pratense
TWI15G0411 Tripterygium wilfordii
TWI63G1774 Tripterygium wilfordii
unitig_22.g6197 Utricularia gibba
vmacro04121 Vaccinium macrocarpon
vmacro13720 Vaccinium macrocarpon
VMungo1127G0258 Vigna mungo
Zm00001eb110870 Zea mays
Zm00001eb329890 Zea mays

User provided reference genes

Program Settings