Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p31810 Brassica napus
A09p31890 Brassica napus
Aa31LG6G8720 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1693 Anthoceros agrestis
Actinidia29409 Actinidia chinensis
Actinidia29410 Actinidia chinensis
Ah.05g178580 Amaranthus hybridus
AL1G50100 Arabidopsis lyrata
AL1G50230 Arabidopsis lyrata
Aqoxy5G02648 Aquilegia oxysepala
AT1G35340 Arabidopsis thaliana
AT1G35420 Arabidopsis thaliana
ATR0320G028 Amborella trichopoda
Atru.chr13.2367 Acer truncatum
Atru.chr13.2372 Acer truncatum
AUR62004600 Chenopodium quinoa
AUR62023544 Chenopodium quinoa
BcaB07g33098 Brassica carinata
BcaB07g33408 Brassica carinata
BcaC08g43723 Brassica carinata
BcaC08g43731 Brassica carinata
BcaNung06721 Brassica carinata
BolC6t36225H Brassica oleracea
BolC6t36236H Brassica oleracea
BraA09t38720Z Brassica rapa
BraA09t38729Z Brassica rapa
C06p11060 Brassica napus
C06p11130 Brassica napus
CAN.G1483.1 Capsicum annuum
CAN.G271.1 Capsicum annuum
CANSAT25G1591 Cannabis sativa
CANSAT25G3020 Cannabis sativa
CARHR034170 Cardamine hirsuta
CARHR034180 Cardamine hirsuta
Carub.0001s3302 Capsella rubella
Carub.0347s0001 Capsella rubella
CBR_g29932 Chara braunii
Cc00_g20990 Coffea canephora
Cc10_g09600 Coffea canephora
CDE02G0175 Ceratophyllum demersum
CDE08G0174 Ceratophyllum demersum
CDE08G1139 Ceratophyllum demersum
Cfa012969 Carpinus fangiana
Cfa012970 Carpinus fangiana
Ciclev10001943m.g Citrus clementina
Ciclev10003535m.g Citrus clementina
CiPaw.07G235600 Carya illinoinensis
CiPaw.07G235700 Carya illinoinensis
ClCG08G000170 Citrullus lanatus
ClCG08G000190 Citrullus lanatus
COL.COLO4_24648 Corchorus olitorius
COL.COLO4_24651 Corchorus olitorius
Cpa.g.sc66.2 Carica papaya
Cpa.g.sc66.3 Carica papaya
Cre16.g669450 Chlamydomonas reinhardtii
Cre16.g670500 Chlamydomonas reinhardtii
CsaV3_5G040540 Cucumis sativus L.
CsaV3_5G040550 Cucumis sativus L.
CSS0003364 Camellia sinensis var. sinensis
CSS0038100 Camellia sinensis var. sinensis
CSS0038880 Camellia sinensis var. sinensis
DCAR_003529 Daucus carota
DCAR_017444 Daucus carota
Dinv19855 Davidia involucrata
Dinv41759 Davidia involucrata
Duzib211G0171 Durio zibethinus
ECA247G3883 Erigeron canadensis
EL10Ac1g00136 Beta vulgaris
Eucgr.F02989 Eucalyptus grandis
Eucgr.F02990 Eucalyptus grandis
FAN04G1660 Fragaria x ananassa
FAN07G1602 Fragaria x ananassa
FAN08G0322 Fragaria x ananassa
FAN08G2588 Fragaria x ananassa
FAN22G1282 Fragaria x ananassa
FvH4_5g26640 Fragaria vesca
FvH4_5g31600 Fragaria vesca
FvH4_5g31620 Fragaria vesca
Glyma.04G256500 Glycine max
Glyma.06G325100 Glycine max
Gohir.A13G119000 Gossypium hirsutum
Gohir.D13G122800 Gossypium hirsutum
Gorai.013G137800 Gossypium raimondii
GSVIVG01026084001 Vitis vinifera
GSVIVG01026088001 Vitis vinifera
HanXRQChr02g0036571 Helianthus annuus
HanXRQChr02g0036581 Helianthus annuus
Haze_21313 Corylus avellana
Haze_21314 Corylus avellana
HPP92_011935 Vanilla planifolia
HPP92_011955 Vanilla planifolia
Lj3g0005610 Lotus japonicus
Lj7A284G37 Lonicera japonica
Lj7A284T38 Lonicera japonica
Lsat_1_v5_gn_1_25800 Lactuca sativa
Lsat_1_v5_gn_1_25820 Lactuca sativa
Manes.02G198600 Manihot esculenta
Manes.18G106000 Manihot esculenta
Mapoly0002s0135 Marchantia polymorpha
Mapoly0085s0045 Marchantia polymorpha
MBI03_g45112_MAGBIO Magnolia biondii
MBI03_g46804_MAGBIO Magnolia biondii
MBI03_g48045_MAGBIO Magnolia biondii
MBI09_g10676_MAGBIO Magnolia biondii
MCO03G373 Micromonas commoda
MD04G1056900 Malus domestica
MD08G1217800 Malus domestica
MD14G1036300 Malus domestica
MD15G1405700 Malus domestica
Medtr1g052490 Medicago truncatula
Medtr3g005060 Medicago truncatula
MELO3C022227.2 Cucumis melo
MELO3C022228.2 Cucumis melo
Migut.C01324 Erythranthe guttata
Migut.N03372 Erythranthe guttata
MSTRG.1569 Avicennia marina
MSTRG.22470 Avicennia marina
Nitab4.5_0001463g0050 Nicotiana tabacum
Nitab4.5_0001463g0060 Nicotiana tabacum
Nitab4.5_0005616g0010 Nicotiana tabacum
Nitab4.5_0005616g0030 Nicotiana tabacum
Nn1g08406 Nelumbo nucifera
Oeu013896.2 Olea europaea
Oeu013897.1 Olea europaea
Os05g0429500 Oryza sativa ssp. japonica
Os11g0219000 Oryza sativa ssp. japonica
Peaxi162Scf00688g00424 Petunia axillaris
PGR042G3286 Punica granatum
PGR042G3332 Punica granatum
PGSC0003DMG400026729 Solanum tuberosum
PGSC0003DMG401025647 Solanum tuberosum
PGSC0003DMG402025647 Solanum tuberosum
Phvul.005G000200 Phaseolus vulgaris
Potri.013G105500 Populus trichocarpa
Potri.013G105634 Populus trichocarpa
Potri.019G079000 Populus trichocarpa
Pp3c10_21530 Physcomitrium patens
Pp3c14_5820 Physcomitrium patens
Pp3c17_9260 Physcomitrium patens
Pp3c18_9200 Physcomitrium patens
PRCOL_00000356 Prasinoderma coloniale
Prupe.1G555600 Prunus persica
Prupe.1G555700 Prunus persica
Psat1g003280 Pisum sativum
PSO017G5271 Papaver somniferum
PSO170G3079 Papaver somniferum
PSO170G6059 Papaver somniferum
PSO782G0406 Papaver somniferum
QL02p014374 Quercus lobata
RcHm_v2.0_Chr7g0227131 Rosa chinensis
RcHm_v2.0_Chr7g0227151 Rosa chinensis
Rhsim11G0052800 Rhododendron simsii
Rhsim11G0052900 Rhododendron simsii
Sabra13G0091200 Salix brachista
SalBow6G0569 Salvia bowleyana
SalBow6G5656 Salvia bowleyana
Sc09g0006790 Simmondsia chinensis
SEGI_18058 Sequoiadendron giganteum
SEGI_30677 Sequoiadendron giganteum
SEGI_34335 Sequoiadendron giganteum
SEGI_39255 Sequoiadendron giganteum
SGA_v2.0_scaffold25G11034 Striga asiatica
Solyc11g027830.2 Solanum lycopersicum
Solyc11g027840.2 Solanum lycopersicum
Sopen11g022590 Solanum pennellii
Sopen11g022610 Solanum pennellii
Sp1g30100 Schrenkiella parvula
Sp1g30140 Schrenkiella parvula
TAR624G0812 Trochodendron aralioides
TAR628G1250 Trochodendron aralioides
TAR636G2860 Trochodendron aralioides
THA.LOC104816521 Tarenaya hassleriana
THA.LOC104816539 Tarenaya hassleriana
Thecc.08G192500 Theobroma cacao
Thecc.08G192700 Theobroma cacao
Thhalv10001819m.g Eutrema salsugineum
Thhalv10001825m.g Eutrema salsugineum
TPR.G25492 Trifolium pratense
TWI14G1031 Tripterygium wilfordii
TWI59G1355 Tripterygium wilfordii
VMungo1080G0925 Vigna mungo
Zm00001eb169160 Zea mays
Zm00001eb348780 Zea mays

User provided reference genes

Program Settings