Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p05440 Brassica napus
A10p25590 Brassica napus
Aa31LG3G15020 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1003 Anthoceros agrestis
Actinidia31174 Actinidia chinensis
Ah.12g059510 Amaranthus hybridus
AL3G23680 Arabidopsis lyrata
AL6G23000 Arabidopsis lyrata
Aqoxy5G00933 Aquilegia oxysepala
Aqoxy7G03759 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.E2NQKT Arachis hypogaea
AT3G12070 Arabidopsis thaliana
AT5G12210 Arabidopsis thaliana
ATR0723G050 Amborella trichopoda
Atru.chr6.919 Acer truncatum
Atru.chr7.1713 Acer truncatum
AUR62017150 Chenopodium quinoa
AUR62035657 Chenopodium quinoa
AUR62041265 Chenopodium quinoa
BcaB01g05420 Brassica carinata
BcaB01g05423 Brassica carinata
BcaB01g05426 Brassica carinata
BcaNung06880 Brassica carinata
BolC3t13141H Brassica oleracea
BolC9t59300H Brassica oleracea
BraA10t44626Z Brassica rapa
C03p06330 Brassica napus
C09p64680 Brassica napus
CAN.G843.44 Capsicum annuum
CANSAT11G0557 Cannabis sativa
CARHR200910 Cardamine hirsuta
Carub.0003s1141 Capsella rubella
Carub.0006s1071 Capsella rubella
Ca_17973_v3 Cicer arietinum L.
CBR_g17690 Chara braunii
Cc04_g06080 Coffea canephora
CDE02G2566 Ceratophyllum demersum
CDE05G0639 Ceratophyllum demersum
Cfa004598 Carpinus fangiana
Cfa014475 Carpinus fangiana
Cfa027002 Carpinus fangiana
Ciclev10015999m.g Citrus clementina
CiPaw.02G104400 Carya illinoinensis
CiPaw.03G164900 Carya illinoinensis
ClCG02G001540 Citrullus lanatus
ClCG09G002660 Citrullus lanatus
COL.COLO4_03532 Corchorus olitorius
COL.COLO4_20947 Corchorus olitorius
Cpa.g.sc50.7 Carica papaya
Cre01.g053500 Chlamydomonas reinhardtii
CsaV3_7G003910 Cucumis sativus L.
CsaV3_7G032670 Cucumis sativus L.
CSS0007239 Camellia sinensis var. sinensis
CSS0029091 Camellia sinensis var. sinensis
CSS0038312 Camellia sinensis var. sinensis
CSS0041311 Camellia sinensis var. sinensis
DCAR_023465 Daucus carota
DCAR_026891 Daucus carota
Dinv09299 Davidia involucrata
Duzib052G0913 Durio zibethinus
ECA232G0889 Erigeron canadensis
ECA233G0965 Erigeron canadensis
EL10Ac9g21128 Beta vulgaris
Eucgr.G01406 Eucalyptus grandis
Eucgr.G01407 Eucalyptus grandis
Eucgr.G01411 Eucalyptus grandis
Eucgr.G02268 Eucalyptus grandis
Eucgr.G02437 Eucalyptus grandis
Eucgr.K00882 Eucalyptus grandis
FAN03G1906 Fragaria x ananassa
FAN05G4396 Fragaria x ananassa
FAN06G3388 Fragaria x ananassa
FAN09G4222 Fragaria x ananassa
FAN10G4129 Fragaria x ananassa
FAN14G4120 Fragaria x ananassa
FvH4_6g43850 Fragaria vesca
FvH4_7g02690 Fragaria vesca
Glyma.05G153500 Glycine max
Glyma.08G111200 Glycine max
Gohir.A03G162800 Gossypium hirsutum
Gohir.D02G186100 Gossypium hirsutum
Gorai.005G208400 Gossypium raimondii
GSVIVG01000415001 Vitis vinifera
GSVIVG01019372001 Vitis vinifera
HanXRQChr02g0051831 Helianthus annuus
HanXRQChr02g0056321 Helianthus annuus
Haze_12989 Corylus avellana
Haze_26189 Corylus avellana
Hma1.2p1_1650F.1_g295665 Hydrangea macrophylla
Hma1.2p1_1872F.1_g306150 Hydrangea macrophylla
HPP92_004888 Vanilla planifolia
Hund05549 Selenicereus undatus
Hund25164 Selenicereus undatus
Lalb_Chr07g0186751 Lupinus albus
Lj3C848T13 Lonicera japonica
Lj4g0004931 Lotus japonicus
Lj4g0017678 Lotus japonicus
Lj6C712G2 Lonicera japonica
Lj6C717T13 Lonicera japonica
Lsat_1_v5_gn_6_29461 Lactuca sativa
Manes.04G060700 Manihot esculenta
Mapoly0074s0013 Marchantia polymorpha
MBI02_g12519_MAGBIO Magnolia biondii
MBI02_g15890_MAGBIO Magnolia biondii
MCO02G125 Micromonas commoda
MD06G1221400 Malus domestica
MD09G1102700 Malus domestica
MD14G1230700 Malus domestica
Medtr1g111160 Medicago truncatula
Medtr8g085230 Medicago truncatula
MELO3C018786.2 Cucumis melo
MELO3C018787.2 Cucumis melo
MELO3C023397.2 Cucumis melo
Migut.A01113 Erythranthe guttata
MSTRG.21385 Avicennia marina
MSTRG.22069 Avicennia marina
Nitab4.5_0001264g0100 Nicotiana tabacum
Nitab4.5_0002046g0050 Nicotiana tabacum
Nitab4.5_0007004g0040 Nicotiana tabacum
Nitab4.5_0010451g0020 Nicotiana tabacum
Nn5g31474 Nelumbo nucifera
Nn7g36520 Nelumbo nucifera
Nn7g37010 Nelumbo nucifera
Oeu015711.3 Olea europaea
Os03g0193700 Oryza sativa ssp. japonica
Os03g0193901 Oryza sativa ssp. japonica
Os08g0512300 Oryza sativa ssp. japonica
Os11g0523500 Oryza sativa ssp. japonica
Peaxi162Scf00314g00337 Petunia axillaris
Peaxi162Scf00571g00532 Petunia axillaris
PGR142G1397 Punica granatum
PGSC0003DMG400005677 Solanum tuberosum
Phvul.002G235200 Phaseolus vulgaris
Potri.013G012500 Populus trichocarpa
Pp3c14_22730 Physcomitrium patens
Pp3c1_39910 Physcomitrium patens
Pp3c2_3550 Physcomitrium patens
PRCOL_00001116 Prasinoderma coloniale
Prupe.2G111600 Prunus persica
Prupe.3G223100 Prunus persica
Prupe.5G225800 Prunus persica
Psat7g074520 Pisum sativum
PSO017G1854 Papaver somniferum
PSO339G0310 Papaver somniferum
QL05p004180 Quercus lobata
QL08p034434 Quercus lobata
QL08p034440 Quercus lobata
RcHm_v2.0_Chr2g0160601 Rosa chinensis
RcHm_v2.0_Chr5g0048191 Rosa chinensis
RcHm_v2.0_Chr7g0226631 Rosa chinensis
RhsimUnG0179500 Rhododendron simsii
RhsimUnG0179700 Rhododendron simsii
RhsimUnG0210700 Rhododendron simsii
Sabra13G0011200 Salix brachista
Sc07g0000800 Simmondsia chinensis
Sed0008204 Sechium edule
SEGI_14663 Sequoiadendron giganteum
SEGI_16055 Sequoiadendron giganteum
SGA_v2.0_scaffold220G42596 Striga asiatica
SGA_v2.0_scaffold227G43195 Striga asiatica
SHI10290 Sapria himalayana
SMO340G0057 Selaginella moellendorffii
Solyc03g118570.4 Solanum lycopersicum
Solyc12g040810.2 Solanum lycopersicum
Sopen03g037520 Solanum pennellii
Sopen12g020600 Solanum pennellii
Sp3g10300 Schrenkiella parvula
Sp6g31430 Schrenkiella parvula
SpUn0863_0010 Schrenkiella parvula
TAR624G0440 Trochodendron aralioides
TAR626G0538 Trochodendron aralioides
THA.LOC104799137 Tarenaya hassleriana
Thecc.10G119200 Theobroma cacao
Thhalv10014116m.g Eutrema salsugineum
Thhalv10021168m.g Eutrema salsugineum
TPR.G11959 Trifolium pratense
TWI39G0383 Tripterygium wilfordii
unitig_8.g4952 Utricularia gibba
unitig_8.g4953 Utricularia gibba
vmacro03401 Vaccinium macrocarpon
vmacro23351 Vaccinium macrocarpon
VMungo0251G2733 Vigna mungo
Zm00001eb035310 Zea mays

User provided reference genes

Program Settings