Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p16060 Brassica napus
A10p09550 Brassica napus
Aa31sc328G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2996 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.2997 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.2998 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.2999 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.3008 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_369.330 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_369.331 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_369.332 Anthoceros agrestis
Actinidia02465 Actinidia chinensis
Ah.04g162600 Amaranthus hybridus
AL3G44140 Arabidopsis lyrata
Aqoxy3G02691 Aquilegia oxysepala
Aqoxy3G02692 Aquilegia oxysepala
Aqoxy3G04250 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.523GVR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ACA5RJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F6FNE6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q9DYE1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TH49EC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XKPK2Z Arachis hypogaea
AT2G07360 Arabidopsis thaliana
ATR0626G390 Amborella trichopoda
Atru.chr12.1314 Acer truncatum
AUR62014286 Chenopodium quinoa
AUR62034148 Chenopodium quinoa
BcaB01g04159 Brassica carinata
BcaB08g35516 Brassica carinata
BcaC01g06134 Brassica carinata
BcaC04g20648 Brassica carinata
BolC3t14282H Brassica oleracea
BolC9t56986H Brassica oleracea
BraA03t10897Z Brassica rapa
BraA10t43030Z Brassica rapa
C03p18900 Brassica napus
C09p41060 Brassica napus
C09p41070 Brassica napus
CAN.G587.52 Capsicum annuum
CANSAT64G2070 Cannabis sativa
CARHR104050 Cardamine hirsuta
Carub.0013s0005 Capsella rubella
Ca_17443_v3 Cicer arietinum L.
CBR_g10827 Chara braunii
Cc06_g23760 Coffea canephora
CDE06G2293 Ceratophyllum demersum
CDE07G0913 Ceratophyllum demersum
CDE07G1201 Ceratophyllum demersum
Ciclev10007279m.g Citrus clementina
CiPaw.15G162500 Carya illinoinensis
ClCG04G000570 Citrullus lanatus
COL.COLO4_37655 Corchorus olitorius
COL.COLO4_38524 Corchorus olitorius
Cpa.g.sc91.64 Carica papaya
Cre08.g384864 Chlamydomonas reinhardtii
CsaV3_4G031470 Cucumis sativus L.
CSS0004980 Camellia sinensis var. sinensis
CSS0043776 Camellia sinensis var. sinensis
DCAR_020453 Daucus carota
Dinv12623 Davidia involucrata
Duzib168G1435 Durio zibethinus
ECA233G1083 Erigeron canadensis
EL10Ac4g08749 Beta vulgaris
Eucgr.E04317 Eucalyptus grandis
FAN12G2055 Fragaria x ananassa
FAN12G3555 Fragaria x ananassa
FAN17G2138 Fragaria x ananassa
FAN22G1465 Fragaria x ananassa
FvH4_4g00210 Fragaria vesca
Glyma.05G220300 Glycine max
Glyma.08G026700 Glycine max
Gohir.A05G000200 Gossypium hirsutum
Gohir.D05G000400 Gossypium hirsutum
Gorai.009G000200 Gossypium raimondii
GSVIVG01022289001 Vitis vinifera
HanXRQChr02g0040541 Helianthus annuus
HanXRQChr05g0138111 Helianthus annuus
HanXRQChr05g0138121 Helianthus annuus
HanXRQChr05g0138991 Helianthus annuus
Haze_19080 Corylus avellana
Haze_19082 Corylus avellana
HPP92_018039 Vanilla planifolia
HPP92_018040 Vanilla planifolia
Hund03218 Selenicereus undatus
Hund19352 Selenicereus undatus
Lalb_Chr05g0223831 Lupinus albus
Lj4g0002190 Lotus japonicus
Lj5A798G49 Lonicera japonica
Lju50A19G12 Lonicera japonica
Lju50C19G3 Lonicera japonica
Lsat_1_v5_gn_1_6680 Lactuca sativa
Lsat_1_v5_gn_4_142760 Lactuca sativa
Lsat_1_v5_gn_5_155680 Lactuca sativa
Lsat_1_v5_gn_7_78841 Lactuca sativa
Lsat_1_v5_gn_8_69981 Lactuca sativa
Lsat_1_v5_gn_8_70001 Lactuca sativa
Manes.02G223900 Manihot esculenta
Mapoly0015s0202 Marchantia polymorpha
MBI05_g23486_MAGBIO Magnolia biondii
MBI05_g48085_MAGBIO Magnolia biondii
MBI14_g31102_MAGBIO Magnolia biondii
MBI14_g32940_MAGBIO Magnolia biondii
MBI18_g07590_MAGBIO Magnolia biondii
MCO15G147 Micromonas commoda
MD04G1002300 Malus domestica
MD07G1055200 Malus domestica
MD07G1055300 Malus domestica
MD07G1055400 Malus domestica
MD07G1055500 Malus domestica
MD15G1427900 Malus domestica
Medtr8g100105 Medicago truncatula
MELO3C009070.2 Cucumis melo
Migut.L01925 Erythranthe guttata
MSTRG.26513 Avicennia marina
Nitab4.5_0000019g0010 Nicotiana tabacum
Nitab4.5_0006114g0010 Nicotiana tabacum
Nitab4.5_0006114g0020 Nicotiana tabacum
Nn1g00173 Nelumbo nucifera
Nn3g19428 Nelumbo nucifera
Oeu008632.1 Olea europaea
Oeu036957.1 Olea europaea
Oeu036958.1 Olea europaea
Oeu036959.1 Olea europaea
Os03g0265666 Oryza sativa ssp. japonica
Os03g0265700 Oryza sativa ssp. japonica
Peaxi162Scf00322g01516 Petunia axillaris
Peaxi162Scf00322g01517 Petunia axillaris
Peaxi162Scf00322g01518 Petunia axillaris
PGR044G2258 Punica granatum
Phvul.002G302000 Phaseolus vulgaris
Potri.018G149400 Populus trichocarpa
Pp3c15_18470 Physcomitrium patens
Prupe.7G042600 Prunus persica
Psat0s1568g0040 Pisum sativum
Psat6g005640 Pisum sativum
Psat7g020760 Pisum sativum
PSO063G0153 Papaver somniferum
PSO782G3302 Papaver somniferum
PSO782G3876 Papaver somniferum
QL11p007303 Quercus lobata
RcHm_v2.0_Chr2g0143661 Rosa chinensis
RcHm_v2.0_Chr4g0384821 Rosa chinensis
RcHm_v2.0_Chr4g0384831 Rosa chinensis
RcHm_v2.0_Chr4g0384941 Rosa chinensis
Rhsim01G0106700 Rhododendron simsii
Sabra18G0126200 Salix brachista
SalBow5G2520 Salvia bowleyana
Sc06g0002410 Simmondsia chinensis
Sed0018603 Sechium edule
SEGI_40037 Sequoiadendron giganteum
SGA_v2.0_scaffold21G09599 Striga asiatica
SHI04092 Sapria himalayana
SMO367G0435 Selaginella moellendorffii
Solyc05g025750.3 Solanum lycopersicum
Sopen05g020060 Solanum pennellii
Sp6g13880 Schrenkiella parvula
TAR383G0820 Trochodendron aralioides
TAR633G1498 Trochodendron aralioides
THA.LOC104808936 Tarenaya hassleriana
Thecc.09G205400 Theobroma cacao
Thhalv10012482m.g Eutrema salsugineum
TPR.G14800 Trifolium pratense
TPR.G25458 Trifolium pratense
TWI34G0561 Tripterygium wilfordii
unitig_899.g15420 Utricularia gibba
unitig_899.g15421 Utricularia gibba
unitig_899.g15422 Utricularia gibba
vmacro20746 Vaccinium macrocarpon
vmacro20747 Vaccinium macrocarpon
vmacro20748 Vaccinium macrocarpon
vmacro20749 Vaccinium macrocarpon
VMungo0251G3699 Vigna mungo
VMungo0331G1237 Vigna mungo
VMungo0331G1533 Vigna mungo
VMungo1209G0002 Vigna mungo
Zm00001eb011800 Zea mays
Zm00001eb086760 Zea mays
Zm00001eb092270 Zea mays
Zm00001eb154330 Zea mays
Zm00001eb164270 Zea mays
Zm00001eb236470 Zea mays
Zm00001eb307240 Zea mays

User provided reference genes

Program Settings