Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p18780 Brassica napus
A02p18790 Brassica napus
A05p18430 Brassica napus
A05p35970 Brassica napus
A05p35980 Brassica napus
A06p14270 Brassica napus
Aa31LG4G3770 Aethionema arabicum
Aa31LG7G2830 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.854 Anthoceros agrestis
Actinidia09075 Actinidia chinensis
Actinidia35129 Actinidia chinensis
Ah.14g085990 Amaranthus hybridus
AL1G30630 Arabidopsis lyrata
AL2G33320 Arabidopsis lyrata
Aqoxy3G00039 Aquilegia oxysepala
Aqoxy3G00054 Aquilegia oxysepala
Aqoxy3G02431 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.679W5T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G74QKM Arachis hypogaea
AT1G18260 Arabidopsis thaliana
AT1G73570 Arabidopsis thaliana
ATR0753G133 Amborella trichopoda
Atru.chr9.1710 Acer truncatum
Atru.chr9.1718 Acer truncatum
Atru.chr9.1724 Acer truncatum
AUR62042013 Chenopodium quinoa
AUR62043006 Chenopodium quinoa
BcaB05g24801 Brassica carinata
BcaB07g31816 Brassica carinata
BcaC04g22654 Brassica carinata
BcaC05g25719 Brassica carinata
BcaC06g36318 Brassica carinata
BcaC07g36877 Brassica carinata
BolC1t04841H Brassica oleracea
BolC2t09162H Brassica oleracea
BolC2t09163H Brassica oleracea
BolC5t30350H Brassica oleracea
BolC7t40944H Brassica oleracea
BraA05t20732Z Brassica rapa
BraA05t20733Z Brassica rapa
BraA05t22403Z Brassica rapa
BraA05t22404Z Brassica rapa
BraA06t24556Z Brassica rapa
C01p48850 Brassica napus
C02p31190 Brassica napus
C02p31200 Brassica napus
C05p16530 Brassica napus
C07p05430 Brassica napus
C07p05440 Brassica napus
C08p01500 Brassica napus
C08p01510 Brassica napus
C09p56670 Brassica napus
CAN.G664.4 Capsicum annuum
CAN.G843.53 Capsicum annuum
CARHR018810 Cardamine hirsuta
CARHR066590 Cardamine hirsuta
Carub.0001s1787 Capsella rubella
Carub.0002s2031 Capsella rubella
Ca_17184_v3 Cicer arietinum L.
CBR_g40333 Chara braunii
Cc04_g06210 Coffea canephora
CDE05G3381 Ceratophyllum demersum
Cfa019652 Carpinus fangiana
Ciclev10007659m.g Citrus clementina
CiPaw.15G143700 Carya illinoinensis
CiPaw.16G093700 Carya illinoinensis
ClCG04G010600 Citrullus lanatus
COL.COLO4_04795 Corchorus olitorius
COL.COLO4_04913 Corchorus olitorius
Cpa.g.sc3.393 Carica papaya
Cre03.g197400 Chlamydomonas reinhardtii
CsaV3_1G007190 Cucumis sativus L.
CSS0048248 Camellia sinensis var. sinensis
DCAR_029422 Daucus carota
Dinv04134 Davidia involucrata
Dinv12692 Davidia involucrata
Duzib068G0750 Durio zibethinus
ECA232G0010 Erigeron canadensis
EL10Ac8g19330 Beta vulgaris
EL10Ac8g19505 Beta vulgaris
Eucgr.B00877 Eucalyptus grandis
Eucgr.B00997 Eucalyptus grandis
FAN04G2446 Fragaria x ananassa
FAN08G2416 Fragaria x ananassa
FAN13G1632 Fragaria x ananassa
FAN18G4514 Fragaria x ananassa
FvH4_5g17420 Fragaria vesca
Glyma.05G246700 Glycine max
Glyma.08G054900 Glycine max
Glyma.15G140700 Glycine max
Gohir.A11G002900 Gossypium hirsutum
Gohir.D11G002500 Gossypium hirsutum
Gorai.007G003500 Gossypium raimondii
GSVIVG01008448001 Vitis vinifera
HanXRQChr14g0456281 Helianthus annuus
HanXRQChr15g0492431 Helianthus annuus
HanXRQChr17g0545731 Helianthus annuus
Haze_18860 Corylus avellana
Hma1.2p1_0127F.1_g059480 Hydrangea macrophylla
Hma1.2p1_0478F.1_g161250 Hydrangea macrophylla
Hma1.2p1_0502F.1_g167690 Hydrangea macrophylla
Hma1.2p1_0632F.1_g192420 Hydrangea macrophylla
Hma1.2p1_0759F.1_g213970 Hydrangea macrophylla
Hma1.2p1_2524F.1_g323905 Hydrangea macrophylla
HPP92_011087 Vanilla planifolia
HPP92_011088 Vanilla planifolia
HPP92_011105 Vanilla planifolia
Hund06721 Selenicereus undatus
Lalb_Chr05g0221621 Lupinus albus
Lalb_Chr09g0330351 Lupinus albus
Lj4g0008657 Lotus japonicus
Lj5C158T14 Lonicera japonica
Lj9A419T35 Lonicera japonica
Lsat_1_v5_gn_0_34021 Lactuca sativa
Manes.06G005600 Manihot esculenta
Manes.06G005800 Manihot esculenta
Mapoly0093s0082 Marchantia polymorpha
MBI19_g04409_MAGBIO Magnolia biondii
MCO08G236 Micromonas commoda
MD06G1227600 Malus domestica
MD14G1236800 Malus domestica
Medtr8g107400 Medicago truncatula
MELO3C002135.2 Cucumis melo
Migut.I00296 Erythranthe guttata
MSTRG.11305 Avicennia marina
Nitab4.5_0003401g0020 Nicotiana tabacum
Nitab4.5_0004556g0010 Nicotiana tabacum
Nn3g18290 Nelumbo nucifera
Oeu002213.1 Olea europaea
Oeu015089.1 Olea europaea
Oeu026275.1 Olea europaea
Oeu046630.1 Olea europaea
Oeu049536.1 Olea europaea
Peaxi162Scf00314g00235 Petunia axillaris
PGR044G0562 Punica granatum
Phvul.002G330600 Phaseolus vulgaris
Potri.012G046300 Populus trichocarpa
Potri.015G038100 Populus trichocarpa
Pp3c19_13490 Physcomitrium patens
Pp3c19_15130 Physcomitrium patens
Pp3c22_10650 Physcomitrium patens
PRCOL_00002904 Prasinoderma coloniale
PRCOL_00004501 Prasinoderma coloniale
Prupe.5G234000 Prunus persica
Psat4g000160 Pisum sativum
Psat4g000240 Pisum sativum
PSO017G5688 Papaver somniferum
PSO478G2458 Papaver somniferum
QL10p029803 Quercus lobata
QL10p029813 Quercus lobata
QL10p030223 Quercus lobata
RcHm_v2.0_Chr7g0178271 Rosa chinensis
Rhsim08G0126600 Rhododendron simsii
Sabra12G0032400 Salix brachista
Sabra15G0036800 Salix brachista
SalBow7G0490 Salvia bowleyana
Sc10g0009160 Simmondsia chinensis
Sed0009438 Sechium edule
Sed0018638 Sechium edule
SEGI_38105 Sequoiadendron giganteum
SGA_v2.0_scaffold102G29891 Striga asiatica
SGA_v2.0_scaffold247G44884 Striga asiatica
SMO228G0037 Selaginella moellendorffii
Solyc03g118670.3 Solanum lycopersicum
Sopen03g037630 Solanum pennellii
Sp1g16220 Schrenkiella parvula
Sp5g28730 Schrenkiella parvula
TAR622G0358 Trochodendron aralioides
TAR629G0485 Trochodendron aralioides
TAR629G3071 Trochodendron aralioides
THA.LOC104813927 Tarenaya hassleriana
Thecc.03G055500 Theobroma cacao
Thhalv10006987m.g Eutrema salsugineum
Thhalv10018231m.g Eutrema salsugineum
TPR.G1449 Trifolium pratense
TWI60G0360 Tripterygium wilfordii
TWI81G0458 Tripterygium wilfordii
unitig_750.g28512 Utricularia gibba
vmacro17776 Vaccinium macrocarpon
vmacro17777 Vaccinium macrocarpon
VMungo0251G1288 Vigna mungo
Zm00001eb011300 Zea mays
Zm00001eb398230 Zea mays

User provided reference genes

Program Settings